Basic Information

Insect: Lordiphosa fenestrarum
Gene Symbol: -
Assembly: GCA_035044985.1
Location: JAWNNO010000054.1:35797-38394[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.063 4 8.4 1.4 1 23 414 436 414 436 0.96

2 7 1.5e-05 0.00095 19.9 1.1 1 23 442 464 442 464 0.98

3 7 5.4e-06 0.00035 21.2 0.2 1 23 470 492 470 492 0.98

4 7 3e-06 0.00019 22.0 1.4 1 23 498 520 498 520 0.98

5 7 0.00034 0.021 15.6 2.1 1 23 526 548 526 548 0.98

6 7 4.4e-06 0.00028 21.5 2.4 3 23 556 576 554 576 0.94

7 7 4.7e-05 0.003 18.3 1.4 1 23 582 605 582 605 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.063	4	8.4	1.4	1	23	414	436	414	436	0.96
2	7	1.5e-05	0.00095	19.9	1.1	1	23	442	464	442	464	0.98
3	7	5.4e-06	0.00035	21.2	0.2	1	23	470	492	470	492	0.98
4	7	3e-06	0.00019	22.0	1.4	1	23	498	520	498	520	0.98
5	7	0.00034	0.021	15.6	2.1	1	23	526	548	526	548	0.98
6	7	4.4e-06	0.00028	21.5	2.4	3	23	556	576	554	576	0.94
7	7	4.7e-05	0.003	18.3	1.4	1	23	582	605	582	605	0.98

Sequence Information

Coding Sequence: ATGCAACGCAAACTGCAAAAAGAGGAACAACTGGAGGAGAACGTAATGCAACTAACACCCCCAGCCACACCGCCCACCGATGTTTCGCCCACCTCACCCGGCAGCGGCGTGACCAGCGTTGACTTCAAATTGCGCTCGCGCCGCGAACTGGAGCGGAATCGGGAATTCGTTAGCTCTCTGCTCCAGAGCTATGAACGCATGGAAAAATTATGGAATCCCAAGCATCCCGACTATAAATACAATGCCAAACGTAGTGTTTATGGTGAATTGGCTGCCCCATTGCAGAATTCATTTCAACTGCAACTCACCGGTGCTGAAATCTTTGCCGTACTCAAGGAACTGCGTGGACGTTATCGTCGAGAGCTGAGCAAACTGAACACTCTGGGCGGGAAGTACAAGTCCAGGCTGTGGTATTTtgataaaatgcattttctaCGCGGTGTCATCGAGCATAAAAGGGCAGAGAGGGAGGCCAAGATCTCCAATGAGAGCACCGAAAGTGAGAAATCCTGCGAAACGGATGCCGAGTCCTCTAGCAAATCTGCACAATATCGTGAAGTTCTGAGCTACATACTCGATGCTTTCAAACGGCAGGAGGTTCTCTGGAATCCACAACACTATGACTTTGCCAGCTGCAACAAAAAGGATCTATACCATGACATCGCCACACAACTGCAAGAAGATCTCAACTATGAGATGAGTGGCGAAGAGTGCTACCAGGAGATACAAAAGCTGAGAACACGTTACCGCAAAGAGCTACGCATGGTGATCAAGCACAAGGGCTTGTATTTGCCCAAACTTTGGTGCTATGATGATTTGGAGTTTCTGCACCCAATATTGCAGGAGCAGATCTTCAACAAAATCAGTAAGAAAGTGGGCGTTGTGGAAACCCAACAGAAAACCAAATTCATCAATGCTCATGTCATAGAGTTTGCCTCCACGGAGGATCAGCTGCAATTTGTGGAAATCTATAGGAACTATTCAGCCTTGTGGGATGTGGATCATCCCGACTTTCGCTCCAATGCCTATCGAAGTCAGGCTCTGAGGCAAATGCTGGAAGAGTTGAATACCACTTTCCATGCCGAATATACCGCCGAGCAGTTGGAGAAGACTTTGTTTGAGCTGCGTAAGAATTTCTCTGCCCAAAAGAGGAAAATCCTAGCCAATGCCAGTGCCTCAAGCAGCATACCCATACTACATGCCAAGCTGGCTCAGTTCTTGGAACAGAATCTGGGACCCTTTTCGTGTGATGTTTGCGGACAGCTGATTAAAACCTGCGATCAGTACAAGGTGCATCGTTCGGCTCACGATGGCACACAGCCGTTTATATGTACACTCTGTGGCAAGGGCTTCCAAATGCCCTGCAATTTAACCGTACACATTAGACGCCATCGCAGAGACTTCCCCTATGCCTGTGAGCGTTGTGATAAAAGATTTGCCACCTCCACCGAGGTGGCCATACATATGCGTACGCATACCGGAGAAAGACCTTATATATGCGACCTGTGTGGCAAATCCTTCAAGACTTGGTCATTCTTTGACATACATCGAAGAAGACATCTAAATCAATCCACCTTCCATTGTCCCATCTGTCCCAAGGGTTTCTATGAGAAGAATCGTTTCACCGATCACATGAACTCCCATTGGGCCATACGCAAGCACCTGTGCACGGTGTGTGGAAAGACCTTCACCACCTATGGCAATCTCAAGAAGCATACCGAACTGCATTTGGCGGTTAAGAAGTACAAATGCTCCGCCTGTGGCAAACGTTTTGCACAGTTTGCTAGCCTGCGCTGGCACAAGAAGCGACAGCATAGCAGCGAAGTGGAACCGGAGGCAGAGAAGAGCACCTGA
Protein Sequence: MQRKLQKEEQLEENVMQLTPPATPPTDVSPTSPGSGVTSVDFKLRSRRELERNREFVSSLLQSYERMEKLWNPKHPDYKYNAKRSVYGELAAPLQNSFQLQLTGAEIFAVLKELRGRYRRELSKLNTLGGKYKSRLWYFDKMHFLRGVIEHKRAEREAKISNESTESEKSCETDAESSSKSAQYREVLSYILDAFKRQEVLWNPQHYDFASCNKKDLYHDIATQLQEDLNYEMSGEECYQEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDDLEFLHPILQEQIFNKISKKVGVVETQQKTKFINAHVIEFASTEDQLQFVEIYRNYSALWDVDHPDFRSNAYRSQALRQMLEELNTTFHAEYTAEQLEKTLFELRKNFSAQKRKILANASASSSIPILHAKLAQFLEQNLGPFSCDVCGQLIKTCDQYKVHRSAHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACERCDKRFATSTEVAIHMRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFHCPICPKGFYEKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCSACGKRFAQFASLRWHKKRQHSSEVEPEAEKST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00606537;
90% Identity: iTF_00920091;
80% Identity: -