Basic Information

Insect: Lordiphosa fenestrarum
Gene Symbol: -
Assembly: GCA_035044985.1
Location: JAWNNO010002253.1:6759-9214[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0097 0.62 11.0 3.8 1 23 256 278 256 278 0.97

2 11 2.3e-06 0.00015 22.4 0.2 1 23 284 306 284 306 0.99

3 11 4.8e-05 0.003 18.3 3.2 1 23 312 335 312 335 0.97

4 11 0.19 12 6.9 3.8 1 20 341 360 341 363 0.95

5 11 0.1 6.7 7.7 1.9 1 23 369 391 369 391 0.93

6 11 0.00015 0.0098 16.7 0.4 1 23 397 419 397 419 0.98

7 11 0.0013 0.08 13.8 0.9 1 23 427 450 427 450 0.94

8 11 0.0069 0.44 11.5 2.2 1 23 456 478 456 478 0.98

9 11 0.0049 0.31 11.9 0.6 1 23 484 506 484 506 0.97

10 11 3.2e-05 0.002 18.8 4.2 1 23 512 535 512 535 0.98

11 11 1.4e-06 8.7e-05 23.1 0.6 1 23 549 571 549 571 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0097	0.62	11.0	3.8	1	23	256	278	256	278	0.97
2	11	2.3e-06	0.00015	22.4	0.2	1	23	284	306	284	306	0.99
3	11	4.8e-05	0.003	18.3	3.2	1	23	312	335	312	335	0.97
4	11	0.19	12	6.9	3.8	1	20	341	360	341	363	0.95
5	11	0.1	6.7	7.7	1.9	1	23	369	391	369	391	0.93
6	11	0.00015	0.0098	16.7	0.4	1	23	397	419	397	419	0.98
7	11	0.0013	0.08	13.8	0.9	1	23	427	450	427	450	0.94
8	11	0.0069	0.44	11.5	2.2	1	23	456	478	456	478	0.98
9	11	0.0049	0.31	11.9	0.6	1	23	484	506	484	506	0.97
10	11	3.2e-05	0.002	18.8	4.2	1	23	512	535	512	535	0.98
11	11	1.4e-06	8.7e-05	23.1	0.6	1	23	549	571	549	571	0.96

Sequence Information

Coding Sequence: ATGCCAAGGCGTACCCGATCCAACGCCGAGTCAGTGGACTTGCAGTCCTTCCTTAACAATTTTCACAAGGAGATTCTAGATGGAGACGACAAAGTGGTAAATAAGATAATTAGGGCCAtggacgaggaggaggaggagcaggaggctAAAGAGGAGgaagagaaggaggaggagcagcaggaagACCACAACGAAAATGATGATGACATTGACGAGGataaatactttatagatgATGAGGGCAATTGCTATATCAAAACAACGCCCAAAATGCAGGAAGAGTTGAAGAAAAAACTGCTGAAGAAAGCGGCAGGCAAAGCTAAGTCCGCCACCAGCAGCAAAACCTCTGCCAAAGCTATCAATCTGCATCCTGCAAAGACTTCACCCAAGCATTCGAGCATCAAAACAGCTTCAGCGGTCAGTGTACGTCCCGCTCTGGCGGCAGCCACCAAACCTAAGCCCAAACCCAATCCCAAACCAGCTGAAAAGCCAACAACAATCCCTCCTCCGCCCGCTAGCGAAACCGTTAAGAAACCAGATGTTACCCCGgaggaagaagaggaggaacaCATTCTTGATGAATTAATGGAAGATCCGGATAACGCCCAAGTGGAAACGATTTCATTTGCGGATGAGTTTGAATTTGATGAACAACCCAATGAAGTTACCAAGCCGGAGGCGGACTTTGCGGTCACTGGCAAGCAGTACAAACTAACGTCCTGTCCCACCTATGAGACTAAGGCTGTGGAGTCCAAAACACATAAATTCGCTTGCACCCACTGCACCTACACTTCAAACAAAAAGTATCTCATAACCCGTCACTTGCGCATTCATTACCATGATTTTGGATTCAAGTGTTCCATCTGCGATCGCGGCTTCAAGTCCAATGCTGGCCTAATAAACCATGTGAACACGCATATGGGTAACAAGCCCCACAAATGCAAGTCCTGCGAGAAGGCCTTCACCACCAGTGGCGAACTGGTTCGTCACACACGGTACAAGCACACCAAGGACAAGCCCCACAAATGCACCGAATGCAACTATGCCAGTGTGGAGCTGACCAAACTGCGTCGTCATATGACCTGCCATACGGGCGAGCGTCCGTTTCAGTGTCCACACTGCACGTATGCCTCGCAGGACATGTTCAAGTTGAAGCGCCACAGCGTCATCCACACCGGCGAGAAGAAATATCAATGTGACATATGCAAGGCGCTTTTCACCCAATCCAATTCCCTGAAGGCCCACAAACTCATCCACAGTGTCGTGGACAAGCCAGTGTTCCAGTGTAGCCTTTGTCCCACCACCTGCGGACGCAAGGCCGATTTGCGCActcatgtggccaatatgcaCACCTCGGATAAGCCGCATGTCTGCAAGCGCTGTGGCCAGCAGCTGCCGGATCGGTATCAGTATAAGCTCCATGTAAAGACTCATGAAGGCGAGAAATGCTATGCCTGCACCGTCTGCAGCTACGCCTCCGTCTCGAGGCGCCATCTGGACTCGCATATGCTTATTCATTTTAATGAGAAGCCCTTCAAGTGTGACTATTGCACCCAGACGTTCCGGCAGCGTCAGCTCTTGCGGCATCATGTGAATACCATACACGACAAGGACTATAAGCCACCAACGCCACGCAGCAAGGTACACAACTGTCCCAGCTGTCCGAGGGTTTTCGCCAACAAGGGCAATCTGATGCGACACATGGAGTCCCACGACAATTCGGTAAATGCGGAAAAGGAGCGcttgaaactgaaactgggTCGCAAACTGCGAGTCAAGCCAAACGGTACCATTGTCCATTTAATGGGTGACAAAGAGGTGGAGGGCGGAGCTATTGAAATAGATGACgttgaagatgatgatgatgatgacaagTCTGAggattttgaaatttgtgaaCTGCAGGAACAGCTAGAGCTAGAGGATAAGCTTGTCAGTGAAGCTGCCAAAAAGGCTACCGCCCGCCCTgttattataaataaacagaAGCCAAGCACCACTTCCACATCCTCCCCCGTCATCATTAATCAGCGCCTGAAAAAGCCAGCTGCCGGCAAAGGTTTCCAAATCAAAGAAGAGCTCGAAACCACCGAGTTCACGGTCAAGCTGCGGGGCGAAAATGGCCAGGTCATGGTTGTAGAACTGATCAATGACGCTGAAGAAGTGGTGGTCAAGCGTGAGCCGAAAGGAATGAATGTGGATGAGAACAACTGCTTCGGCTTTGAGGATGACGTTGAGCCAGACTACGAAGAGTATGATCAGGATGCCGAAGTGGATGGCACTTCGCAAGAATTCTTACAACTCATGGACATGATCGAACAAGATAATTAG
Protein Sequence: MPRRTRSNAESVDLQSFLNNFHKEILDGDDKVVNKIIRAMDEEEEEQEAKEEEEKEEEQQEDHNENDDDIDEDKYFIDDEGNCYIKTTPKMQEELKKKLLKKAAGKAKSATSSKTSAKAINLHPAKTSPKHSSIKTASAVSVRPALAAATKPKPKPNPKPAEKPTTIPPPPASETVKKPDVTPEEEEEEHILDELMEDPDNAQVETISFADEFEFDEQPNEVTKPEADFAVTGKQYKLTSCPTYETKAVESKTHKFACTHCTYTSNKKYLITRHLRIHYHDFGFKCSICDRGFKSNAGLINHVNTHMGNKPHKCKSCEKAFTTSGELVRHTRYKHTKDKPHKCTECNYASVELTKLRRHMTCHTGERPFQCPHCTYASQDMFKLKRHSVIHTGEKKYQCDICKALFTQSNSLKAHKLIHSVVDKPVFQCSLCPTTCGRKADLRTHVANMHTSDKPHVCKRCGQQLPDRYQYKLHVKTHEGEKCYACTVCSYASVSRRHLDSHMLIHFNEKPFKCDYCTQTFRQRQLLRHHVNTIHDKDYKPPTPRSKVHNCPSCPRVFANKGNLMRHMESHDNSVNAEKERLKLKLGRKLRVKPNGTIVHLMGDKEVEGGAIEIDDVEDDDDDDKSEDFEICELQEQLELEDKLVSEAAKKATARPVIINKQKPSTTSTSSPVIINQRLKKPAAGKGFQIKEELETTEFTVKLRGENGQVMVVELINDAEEVVVKREPKGMNVDENNCFGFEDDVEPDYEEYDQDAEVDGTSQEFLQLMDMIEQDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00914718;
90% Identity: iTF_00914718;
80% Identity: -