Basic Information

Insect: Lordiphosa fenestrarum
Gene Symbol: -
Assembly: GCA_035044985.1
Location: JAWNNO010004570.1:83367-86516[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.3e-05 0.0015 19.2 5.2 1 23 168 190 168 190 0.97

2 16 0.0043 0.28 12.1 2.3 1 23 228 251 228 251 0.96

3 16 0.00034 0.022 15.6 2.7 1 23 306 329 306 329 0.96

4 16 0.0076 0.49 11.3 1.4 2 23 382 403 381 403 0.97

5 16 5.9 3.8e+02 2.2 0.7 1 19 518 536 518 538 0.76

6 16 0.027 1.7 9.6 0.6 1 23 548 570 548 570 0.94

7 16 0.00026 0.016 16.0 0.7 1 23 577 600 577 600 0.96

8 16 0.0006 0.038 14.8 0.9 2 23 609 630 608 630 0.96

9 16 0.011 0.71 10.8 0.8 2 20 657 675 656 680 0.91

10 16 0.0012 0.077 13.8 1.6 1 23 719 742 719 742 0.96

11 16 7.3 4.7e+02 1.9 2.6 1 22 749 770 749 770 0.95

12 16 0.0025 0.16 12.9 1.1 1 23 779 802 779 802 0.96

13 16 7.8e-05 0.005 17.6 0.5 1 23 836 859 836 859 0.96

14 16 0.13 8.5 7.4 0.2 1 23 869 891 869 891 0.94

15 16 8.9e-05 0.0057 17.4 3.7 1 23 897 919 897 919 0.99

16 16 5.3e-06 0.00034 21.3 2.0 1 23 925 947 925 947 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.3e-05	0.0015	19.2	5.2	1	23	168	190	168	190	0.97
2	16	0.0043	0.28	12.1	2.3	1	23	228	251	228	251	0.96
3	16	0.00034	0.022	15.6	2.7	1	23	306	329	306	329	0.96
4	16	0.0076	0.49	11.3	1.4	2	23	382	403	381	403	0.97
5	16	5.9	3.8e+02	2.2	0.7	1	19	518	536	518	538	0.76
6	16	0.027	1.7	9.6	0.6	1	23	548	570	548	570	0.94
7	16	0.00026	0.016	16.0	0.7	1	23	577	600	577	600	0.96
8	16	0.0006	0.038	14.8	0.9	2	23	609	630	608	630	0.96
9	16	0.011	0.71	10.8	0.8	2	20	657	675	656	680	0.91
10	16	0.0012	0.077	13.8	1.6	1	23	719	742	719	742	0.96
11	16	7.3	4.7e+02	1.9	2.6	1	22	749	770	749	770	0.95
12	16	0.0025	0.16	12.9	1.1	1	23	779	802	779	802	0.96
13	16	7.8e-05	0.005	17.6	0.5	1	23	836	859	836	859	0.96
14	16	0.13	8.5	7.4	0.2	1	23	869	891	869	891	0.94
15	16	8.9e-05	0.0057	17.4	3.7	1	23	897	919	897	919	0.99
16	16	5.3e-06	0.00034	21.3	2.0	1	23	925	947	925	947	0.98

Sequence Information

Coding Sequence: ATGACCAGAGCCTGCAGAATCTGTGCCAGCAATGAGGGGCGGTTTTGGATTGAAACGCCTGTGGAGAAATATGCAGATAAGACCTTCAATCAGTTGCTAGTGGAGCTAACACGAATAGAGGTGACCATGTCGCAGTCAGACCAGCTGCCGTCTTGGCTATGTCGAAGCTGTGCACAGAAATTACAGAATTCCTATGACTTTGTACTGCAAGCCAGGGAGACGCACGAAATGTGGCTGCAAAAGCTACAGTCTGGGGAGAAAGATGAGGAGGATGGAGACGGGGCTGATATAGACACCTGCCTGCGTGAGACTCCCATTGAACTGTTGGAGATTGAGGGTGTTATCATCAAAATGGAGGTACCAGAACCAGCTGCTGCCGCAGCGGCACCCGATCCACTGGTGCGCGCACGCCTAGCCCATTTAAGTGAAACAGATGACGAGGATGATGTGCCACTGAAGCAACGTTGTGCCGCCAAGCCGGGACTTGCACAACTGAAGCAACATAAATGTAATTTGTGTAACAAATCCTTCCGATATATCTCTAATCTACAAAGGCACAAAAAGGAACATGGCAATTCCATTGAGAAGCCGGAACCCTTTCTGCATAGTGTAATCAAAAGTGCGGTGGCTGCCAGAAGCCACTCAAAGCCGGATCtcgatgaggatgaggaggataACTACTATAAATGCGATCAGTGTGACAAAGCCTACAAATATATTATGCTGCTGGTCAAGCACAAGCATAAGGCGCATGGAGGAAGCCAAATGCCTGTTTCCGGCAGGCTTACACGTCCTGGAGCAGTTGCTGTGGAGGCTGCCCAACGACCCAAGCTCAGCACGGATACCCTGGTGCACAGTCTTATACAGGCTGTGGAGATCTCCGATGAGGATGGCAACTCCAGTTCGGATAATTATTACAAGTGCGATGAGTGTGATAAATCCTACAAATACATAGTCAGTCTCATCAAGCACAAACACAAGGAACattccgatttggccaaagatGCCTTGGCAACTGATGATCAGCCCCTGGCCTCCACTTCCGCCTCGGCTGCCATGGCCAAGCCAAAGCCCTCGCGCATCAATCGTCGTGTCCAGGGCTTCGATATGTATCGCTGCCAGCCCAATGGCTCCAAGGAGATACAGTGTATGATCTGTCTGCGTCGCTTTGCCAAACTGGGCGAACTACGCACCCATCTCAAACATCATCCCAAAGATTTCGATTTCCAAGCTCATGGTGAACCCATTGAGCGCATTGCCGAGGGCTTCTTTAAGACTGCCGTGGAGTCCACCGTCGAGGGTCTGAAACGGCGCATACTCAATGATCTCAGCGAGGGCGTCTTTGGACGCTACTACTCCATTACCAATCAGGCACGCTACGAGATGAGTCTGGACAGCTCGGATACGGATAGCGAGGGTGATGAAGCCGCCGAAGTGGTGCTGCGTCGCAGCTATGCCTGTGAGCTGTGCGACAAGCCGCAGGCGAAATGGCCAAGAAAATATCAACTGCATGAGCATCACATGAGAAGCCACACCTGGATGGAGGCACCGTATGTGTGTCGGCGCTGCGATTCTCGTTTTCTGAGTGAACAACTACTGGAGCACCACACTAGTCAATTATGCCAAAACACTCTAAAACGTTTCATGTGCGATAAGTGTCCGCAGCGTTTCTTTTGGCGCAGAAATCTAAGGGCCCATCTGGTGGAGCACAAGGATAAGCAAGAGAACTACCCGTGTGACCAATGCCAACGCAGTTTTCAGGACAAAAGCGCTGTGACCAAGCACAAATTGATGATGCATTCGGATGGCAATGGTCAGCTTTTACCCTGTCGCTGGTGCACTCGTGTGTTCTATCGACCCGCCTTGCTGCACAAGCATGTGCAGCGACATGGCTTCAGTGGTCAGGATTTACCTTTGGCCGAGACTTTGCTAGCGGATGCCGCCAAGCCACTGGGTCCCAAGACCATTCACTGCAAGCTGTGTAACATACAGTTTGTTAGTATTGCGGATTTGCGACGTCATATGGTCCATTCGGGGCATGAGCAGCAGGCCTGCAACTATATGATCAGCACCGAGACGGGCTTTGAACTGCAACTGGAGGATACAGATGATAGTGATGATGGCGGCGAAGAGGCTGCCCATGCTAGAAGATCCTACACTTGTGATCTGTGTCAGATGAGCTTTCGTCGACGGCGGGACATGAGTGAGCATCAGTATTCTTTGCATACGTTTGATAAGGTGCCACATACCTGCCAGCATTGCATTTACAAGAGTGTGGACAGGCTTATGCTGGAGCATCATCTGCGTACTCAATGCTGTAACCAGGACAAGAAATTCATTTGTTCGCATTGTGGCTATAAATTCATGTGGCAACAGAATCTCGAACAGCATTTAGCCACTCTACATCCCAAACCAAACAGCAGCCaggagcaacaacagcagcagctgctcctgcaacagcagcaacaacaacagatgCCCatacgacgacgacgtcgtTTCCGCTACCAATGTCCGCACTGCTGGCGCTCATTTGTCATCCAGCCCAGCTTGGATAAGCACATACGGGACATGCATGTGGCCAAAAAGAATCCGGGCAAGAAGTATCTATGCTCGCTGTGCGGCCTAGAGTCGCTGACACCCAACAAACTGAGCATACATATGCGTCGTCACAATGGCGAAAAGCCCTTCAAATGCGATCTATGCGACATGCGTTTTACGGTCCACTACGAACTGAAGGTTCATCGTAGAAAGCATACCGGCGAGCGTCCATATCAGTGCACCTTCTGTGACAAGTATTTCGCGCGACCGGACAAATTGAGGCGGCATCTCTATATGCACAGTTTAAAGCATTAG
Protein Sequence: MTRACRICASNEGRFWIETPVEKYADKTFNQLLVELTRIEVTMSQSDQLPSWLCRSCAQKLQNSYDFVLQARETHEMWLQKLQSGEKDEEDGDGADIDTCLRETPIELLEIEGVIIKMEVPEPAAAAAAPDPLVRARLAHLSETDDEDDVPLKQRCAAKPGLAQLKQHKCNLCNKSFRYISNLQRHKKEHGNSIEKPEPFLHSVIKSAVAARSHSKPDLDEDEEDNYYKCDQCDKAYKYIMLLVKHKHKAHGGSQMPVSGRLTRPGAVAVEAAQRPKLSTDTLVHSLIQAVEISDEDGNSSSDNYYKCDECDKSYKYIVSLIKHKHKEHSDLAKDALATDDQPLASTSASAAMAKPKPSRINRRVQGFDMYRCQPNGSKEIQCMICLRRFAKLGELRTHLKHHPKDFDFQAHGEPIERIAEGFFKTAVESTVEGLKRRILNDLSEGVFGRYYSITNQARYEMSLDSSDTDSEGDEAAEVVLRRSYACELCDKPQAKWPRKYQLHEHHMRSHTWMEAPYVCRRCDSRFLSEQLLEHHTSQLCQNTLKRFMCDKCPQRFFWRRNLRAHLVEHKDKQENYPCDQCQRSFQDKSAVTKHKLMMHSDGNGQLLPCRWCTRVFYRPALLHKHVQRHGFSGQDLPLAETLLADAAKPLGPKTIHCKLCNIQFVSIADLRRHMVHSGHEQQACNYMISTETGFELQLEDTDDSDDGGEEAAHARRSYTCDLCQMSFRRRRDMSEHQYSLHTFDKVPHTCQHCIYKSVDRLMLEHHLRTQCCNQDKKFICSHCGYKFMWQQNLEQHLATLHPKPNSSQEQQQQQLLLQQQQQQQMPIRRRRRFRYQCPHCWRSFVIQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLSIHMRRHNGEKPFKCDLCDMRFTVHYELKVHRRKHTGERPYQCTFCDKYFARPDKLRRHLYMHSLKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00914715;
90% Identity: iTF_00914715;
80% Identity: -