Lfen004204.1
Basic Information
- Insect
- Lordiphosa fenestrarum
- Gene Symbol
- retn
- Assembly
- GCA_035044985.1
- Location
- JAWNNO010001228.1:162315-171665[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-26 6.3e-23 81.3 0.0 2 89 20 105 19 105 0.96 2 2 1.9 6.4e+03 -2.0 0.2 26 26 251 251 201 292 0.62
Sequence Information
- Coding Sequence
- ATGCTGATATCCGAGGATCAAATCCAGGagCTGTATGAAATCAATGATGATCCCAAACGCAAGGAGTTCCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATTAATCGATTACCCATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTATAATCTGGTGATAGCGCGTGGCGGCCTGGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGCGCGGCGTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCATACGAGTGCGAGAAGAAGAACCTCAGCACTCCGGCTGAACTGCAGGCGGCAATTGATGGCAATCGCCGGGAGGGACGCCGCTCCAGCTATGGTCAGTACGAGGCGATGCACAATCAGATGCCACTGACGCCCATTTCGCGTCCACCCATGCCGGGTGGCATGCAGCAGATGTCGCCACTGGCCTTGGTCACACATGCGGCCGCGGCCAACAATCAACAGGCTCAGGCggcagccgctgctgctgctgcccatcGACGACTGATGGGTGCTCCCGGCTTTGGTCAGATGCCCAATTTGGTCACACAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTCATACAGGCCAAAAAGGAGCAGCAGAGCCTCAATCCGGTGCACCATtcccaccagcagcagcagcaacagacaCAGCCCACGCAGCAGCAACCACACCacctgcaacagcagcagcagcaacagcaacaacagcagcagcagcagcgccagcGTTCCCCCAGTCCAGAGATGAGCACACGGGAGGCACTCAGTGCTCAGGTGGCGCTGTGGCATATGTACCATAACAATACCAGTCCGCCGGCTTCCGCCCACACCTCCCCGCAGCAAAGGGAAGCCCTCAATCTCTCCGACTCTCCGCCAAATCTAACTAATATCAAACGGGAAAGGGAACGTGATCCCACACCCGAACCACTGGACCAAGACGAAGCTCCGCATCAGCCACCGCCGGCCAAACGTGTGGGCAGCGGTCTCATGCCGCCCGGTTTTCCAGCCAACTTCTATCTAAATCCCCACAATATGGCCGCCGTGGCGGCCGCTGCAGGTTTCCATCACCAGGCCAACAGTGGCAACCACCAGCAACTGCAGCACGATGCCGCCTCCGAGGGCGAGCCGGAGGATGAGTATGGCAATAATGAGCACAACACCACCGGCAATTCATCGTCCATGCATGAGGATGGCGAGCCACAGCAAATCAATGGAcaccatcatcagcatcatcagctGGACAAATCCGATGACTCGGCCATAGAGAATTCCCCCAGCACTTCGAACACCACACACCGCCACAGCTCGCCGGTTTCCACCAAAAAGAAGTCACAAGCGGGAGCAAAGGATACGAAATCAGGCGACAAGTGTGTGGGAAGTGGTGGCAAATTGAATCCTCTAGAGACGCTGAGTCTGCTGTCGGGTATGCAGTTTCAAGTGGCGCGCAATGAAACGGGCGAGAATGGCGAGCCCCAGCTGAGAGTGAACCTCGAGCTGAATGGCATCAAGTACTCGGGCATACTGGTGGCTCATGTACCACTGGCAGACAATGAGGAAGCAGCTGAGTGCTCCGAGGAGCCAGTAGAAATGAATAAAactgagcagcagcagcagcaggatgaAGAGGAGGAAGCGGAATGCACGTCTGTCAAGGAGGAAACCAGCGAGCGAGAACTAGATACTACTGCGGCCATTGTGAATGGTGTCAGCGGTGGTaatggtggcggtggtggtgtgGGTGTAGCCTTGCTAAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGAPGFGQMPNLVTQEIENRMMEYLQLIQAKKEQQSLNPVHHSHQQQQQQTQPTQQQPHHLQQQQQQQQQQQQQQRQRSPSPEMSTREALSAQVALWHMYHNNTSPPASAHTSPQQREALNLSDSPPNLTNIKRERERDPTPEPLDQDEAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGNHQQLQHDAASEGEPEDEYGNNEHNTTGNSSSMHEDGEPQQINGHHHQHHQLDKSDDSAIENSPSTSNTTHRHSSPVSTKKKSQAGAKDTKSGDKCVGSGGKLNPLETLSLLSGMQFQVARNETGENGEPQLRVNLELNGIKYSGILVAHVPLADNEEAAECSEEPVEMNKTEQQQQQDEEEEAECTSVKEETSERELDTTAAIVNGVSGGNGGGGGVGVALLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00916010;
- 90% Identity
- -
- 80% Identity
- -