Basic Information

Insect: Lordiphosa collinella
Gene Symbol: stc
Assembly: GCA_018904265.1
Location: JAEIFV010000178.1:386995-391318[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.1e+04 -4.1 1.6 15 19 386 390 385 390 0.81

2 14 0.047 4.9e+02 1.1 2.2 4 11 419 426 418 427 0.91

3 14 5.8e-07 0.0061 16.8 15.1 1 19 431 448 431 448 0.93

4 14 6.1e-08 0.00064 19.9 13.1 1 18 484 501 484 502 0.98

5 14 1.7 1.8e+04 -3.9 1.5 7 13 506 512 506 513 0.75

6 14 3.4e-09 3.6e-05 23.9 13.6 1 19 542 560 542 560 0.98

7 14 1.4 1.5e+04 -3.7 0.5 5 10 590 595 590 595 0.85

8 14 2.3e-05 0.25 11.7 17.0 4 19 608 623 601 623 0.88

9 14 0.043 4.6e+02 1.2 10.8 1 11 663 673 663 685 0.88

10 14 1.4e-09 1.5e-05 25.1 14.0 1 18 690 707 690 708 0.97

11 14 1.7 1.8e+04 -3.9 0.9 6 10 737 741 737 742 0.81

12 14 2 2.1e+04 -9.3 11.6 10 18 755 764 744 765 0.72

13 14 0.0013 14 6.1 2.4 8 17 793 802 792 808 0.89

14 14 3.2e-07 0.0034 17.6 13.4 1 19 818 837 818 837 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.1e+04	-4.1	1.6	15	19	386	390	385	390	0.81
2	14	0.047	4.9e+02	1.1	2.2	4	11	419	426	418	427	0.91
3	14	5.8e-07	0.0061	16.8	15.1	1	19	431	448	431	448	0.93
4	14	6.1e-08	0.00064	19.9	13.1	1	18	484	501	484	502	0.98
5	14	1.7	1.8e+04	-3.9	1.5	7	13	506	512	506	513	0.75
6	14	3.4e-09	3.6e-05	23.9	13.6	1	19	542	560	542	560	0.98
7	14	1.4	1.5e+04	-3.7	0.5	5	10	590	595	590	595	0.85
8	14	2.3e-05	0.25	11.7	17.0	4	19	608	623	601	623	0.88
9	14	0.043	4.6e+02	1.2	10.8	1	11	663	673	663	685	0.88
10	14	1.4e-09	1.5e-05	25.1	14.0	1	18	690	707	690	708	0.97
11	14	1.7	1.8e+04	-3.9	0.9	6	10	737	741	737	742	0.81
12	14	2	2.1e+04	-9.3	11.6	10	18	755	764	744	765	0.72
13	14	0.0013	14	6.1	2.4	8	17	793	802	792	808	0.89
14	14	3.2e-07	0.0034	17.6	13.4	1	19	818	837	818	837	0.96

Sequence Information

Coding Sequence: ATGGCCGAGTACTGGCAGCAGCTCTCCAATGGAGCTGGAGCTGGACCGGGAGCAATGGCTAATGAGGCGTCTGCGTCATCCGCGGCCGCTGCCGCCTGCAATGGCGGCCACGAGGCAGCGGGCACGAGTGCAGGAGCCAACACATCAGGCAACAACAACAATAACTATGTGAATTTCAATCAATTCATCATGCAGCATAATTTGGGCATGCATTCAGTTGCAGGCGGTGGCGGAGCCTTTGGCCTTACGCCTCCAGCAGCGGCAGCAGCAGCGGGTGGTGGTCATGCCCATGGCTATGGTCAGTTTTATTCTCAGCCAATGTACCCATCATATCAAAACGGCGATGGCATTGCTAGTGGCTCGTACACAGCATCCAATAATTATGCGGGGCCCAGCAGCAGCACAAGCAACAGCAACAATTCGTTTGGCCAACTTTATACACCATTTGGAAACAATCCTTTCGATTTCAGTGCTTCCAAGCTGCAGGCAACAGCGCCTGAATTTGTGCCCCATATGGCCAAACTGAGTCTAGACGAGTCAGCAGCAGCGCCAATAATAAATGGCAATAGCAACTACACTGCCAGCCTAGAAACTGCCAATCATGAAGGGGGCGCTGTCCAGGCCCCAAACAAGCATGAAATGCACACCAAGTCTCGTCTGAATCCAAATTATGGGGACCGGCAACGACAGCAACGTCGCGTTGATTATCGAGACGAACGCGAGGATCGCTATGATAGAAATGATAGAAAGAAACCGCAGAAGCAACAGCGCTATGACAATCATAGGAGCAACAAGAGACGTGACGATTGGAACAGGAACAGGGATCGAATCAATGGTTATCCCAGGAACACAGAGGAGTTGGACACGAGCAACGAAAGCAATCAGCCCTCGCCAGAAAAACAGCAGCAGCAGCTGTCGCCCAAGAGGGACAATATGTCAGGCGACGGAGGAGCAGCAGCTGCTGATAATGAGAAACTCTCGCAGAGGGAGAAACTAATCAGGGATATAGAACAGAGGCGCTTGGAGTGTTTAGTATGCGTGGAGGCCATTAAGGCTCATCATGCCATTTGGTCCTGCCAGAATTGCTATCATGTCATACATTTGAAGTGCACCATTACATGGGCCAGCAGTTCCAAGTCGGATATGGGCTGGAGGTGTCCAGCTTGTCAGAATGTCCTACAGGAATTGCCCAGAGAATATTTGTGTTTTTGTGGCAAATTGAAGAATCCGCCAGTTAGTCGCAATGAATTGGCCCACAGCTGTGGCGAAGTATGCTGCCGAATCGAAGGCTGTTCCCATGCTTGTACTCTGCTATGCCATCCGGGACCCTGTCCGCCGTGTCAGGCGAATGTTGAAAGGAAATGCGGTTGTGGTCGGAGTTCCAAGACCATGCAGTGTGCTATGAAAGAAGAGTTGAAGTGTGGCGAAATATGCGATAAAATGCTGAACTGTGGCGAGCATCGTTGCCAGCAGGAATGTCATGCGGGCAAGTGCTCGAGCTGTGCGGAGCAGGTGCAGCAAAATTGCCACTGCGGCAAGCAGGATCGATTCGTTTTATGTACCCGAGAGAATCAGGATAAGCGTAGTTACTCCTGCATGGAGTCCTGTGGCCAGCCTTTGCCCTGTGGCAATCATAAGTGCAAGGACTCGTGTCACGCGGGCTCCTGCAGGCCCTGTAAGCTCAGTCCCGAACAGATCACCAGTTGTCCTTGTGGCAAAATGCCCATTCCCTCGGCACAACGTACCAGCTGCCTGGATCCCGTACCCACCTGTGAGGGCCTCTGCTCTCGCACTTTACGCTGCGGCAAGCCGGCTCATCCGCATCAATGTGCCAGTAAATGTCATCTGGGTCAGTGCCCACCGTGTCCCAAGCAAACTGCCGTCAAGTGTCGCTGTGGCCACATGGATCAGTTAATTAAATGCCGTCAACTCTCCACCCGTGCCGATGATGCACGATGCAAGCGCCGCTGCATCAAGAAGCGCAGCTGTGGCAAACACAAATGTAATGCCGAATGTTGCATCGACATCGATCATCTCTGTCCCTTGCCCTGCAATCGTACTCTGGGCTGTGGACGTCATAAGTGCGATCAGAACTGTCATCGTGGCAATTGCCCACCCTGCTATCGCAGCTCCTTCGAGGAACTCTATTGCGAATGCGGCGCCGAGGTCATCTATCCGCCAGTTCCCTGCGGCACCAAGAAACCACTATGCAAACGTCCTTGCTCTCGCTCTCATCCCTGTGAACATCCACCGCAGCACAATTGCCATTCGGTGGCCACTTGTCCGCCATGCATGATATTCACCACCAAATGCCCACCTTTAGTTGTGGCCTGGCATGTGGCAAACCTTTGCCCTGTGGTCGTCATAAATGCATCAAAGCCTTGCCATGAGGGCGTCTGTCAATCCGAGGGAGAACTTTGCCGTCAAAGTTGTACTAAGCCCAGAGCGGTGTGTGGACACAAATGTGCTGCCGCGTGTCACGAGGGAAATTGTCCAGAGACACCCTGCAAGGAATTGGTCGAGGTGCAGTGCGAATGTGGACATCGTAAACAGAGTCGCAGCTGTCAGGAGTTGGTGCGTGAGCATAGCCGTATTGCCACCGCCCAGTTGGCCTCCTCCATGGCGGAGATGTCCAGAGGAAATTATATGGAATTGAGCGAGATACTGGCACCAGCCAAGGGTAATAAGTCCAACAAAACTTTGGACTGCAATGAAGAATGTCGCCTGCTTGAGCGTAATCGTCGTTTGGCTGTGGCCTTTCAATCTGGACGCAATCCGGAAACGCAACCAAAATCGCTCACCAAATACTCAGAATTTGTGCGCGGCTTTGCCAAACGCAATCCGGCGCTAACGAAAAGCGTTTACGAGACATTGAGCGATTTGGTTAAATTGGCCAAAGAGAGCAAACAAAGGTCCAGAAGTCATTCGTTTCCAACCATGAACCGCGAGAAGCGTCAGCTGGTGCATGAGTTGTGTGAGATTTTTGGAGTAGAGTCGGTGTCCTACGACAAGGAGCCCAATCGCAATGTGGTGGCCACTGCGCACAAGGAAAGATGCTGGCTACCTGCCACCAGTATAATGGAGGTACTGGCCCGTGAATCTGGACAACGTCGTGTCCCCGTACCCAGCAACAATGCCTGGGGTTTGAAGAAATAG
Protein Sequence: MAEYWQQLSNGAGAGPGAMANEASASSAAAAACNGGHEAAGTSAGANTSGNNNNNYVNFNQFIMQHNLGMHSVAGGGGAFGLTPPAAAAAAGGGHAHGYGQFYSQPMYPSYQNGDGIASGSYTASNNYAGPSSSTSNSNNSFGQLYTPFGNNPFDFSASKLQATAPEFVPHMAKLSLDESAAAPIINGNSNYTASLETANHEGGAVQAPNKHEMHTKSRLNPNYGDRQRQQRRVDYRDEREDRYDRNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRNTEELDTSNESNQPSPEKQQQQLSPKRDNMSGDGGAAAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHHAIWSCQNCYHVIHLKCTITWASSSKSDMGWRCPACQNVLQELPREYLCFCGKLKNPPVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVERKCGCGRSSKTMQCAMKEELKCGEICDKMLNCGEHRCQQECHAGKCSSCAEQVQQNCHCGKQDRFVLCTRENQDKRSYSCMESCGQPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPIPSAQRTSCLDPVPTCEGLCSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCIKKRSCGKHKCNAECCIDIDHLCPLPCNRTLGCGRHKCDQNCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSVATCPPCMIFTTKCPPLVVAWHVANLCPVVVINASKPCHEGVCQSEGELCRQSCTKPRAVCGHKCAAACHEGNCPETPCKELVEVQCECGHRKQSRSCQELVREHSRIATAQLASSMAEMSRGNYMELSEILAPAKGNKSNKTLDCNEECRLLERNRRLAVAFQSGRNPETQPKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00920341;
90% Identity: iTF_00914999;
80% Identity: -