Lcol010776.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- -
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000895.1:48661-49349[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00016 0.68 10.0 1.7 20 49 18 48 15 49 0.86 2 2 8.7e-07 0.0037 17.2 1.3 19 49 101 132 98 133 0.91
Sequence Information
- Coding Sequence
- ATGGAGAATTGCATTATTTGCTTAGGTGTTAAAAAGGATCCATGGGTTATTGGCTGCGGGCACTCTTTTTGCTTAAGCTGTTTCACAGCCTTCAAGTCCTCGGATCGCTTTCGTAATAATCCAAGGTGTCCGGTTTGCAAAATTGCTTTAACTGTAGAGGGTGACAAGGCTGAGGAATCGCCAGTAAGTATAAGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTGATCCGGTATTCATACGCTGCGGCCATTCCTTTTGCTTTGACTGCTTAGAGAGATTTAAGCTCAACAATCGTCCACCTGCCCAGCGCAAGTGTCCCCTGTGTCGCGCCTCGTTCGATGAACCAGAGTTGGAGCAGTCGGCCACGGCCACGGATAACCAACAACCTACAACGAGCTCTGCTTCTGCTACTCTGAATGCTCCTGTCGCTTCAGATAGTGCCCGTGATCTAGACAATGATGATTTCGAGGAAATGTTAGATAACTCACTGGATGCAGATTTCGAGTTTGATGATATGGACGAGTTCTATTTCGATATTGATGACTATTTTGATTTGTCCGAATTTTGA
- Protein Sequence
- MENCIICLGVKKDPWVIGCGHSFCLSCFTAFKSSDRFRNNPRCPVCKIALTVEGDKAEESPVSIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPVFIRCGHSFCFDCLERFKLNNRPPAQRKCPLCRASFDEPELEQSATATDNQQPTTSSASATLNAPVASDSARDLDNDDFEEMLDNSLDADFEFDDMDEFYFDIDDYFDLSEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -