Lcol012683.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- GATA6
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000513.1:189040-206367[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3 9.9e+03 -3.5 0.7 1 5 453 457 453 477 0.67 2 2 1.9e-17 7.9e-14 51.2 6.9 1 34 504 536 504 538 0.97
Sequence Information
- Coding Sequence
- ATGGTTTGCAATAGTCTTGAATTAGATGTCAAGATGCAGCTGAAGGTTAAGGATTACGAAGAGGCCACCTCCAAGGCCCACAATATCCAGAGATTGAACATTTCCGTGGTCCTGCAGGGAAAGCTCAGTCACTTTGCTCTCAAGAAGAAGCGCCAGCAGTTCTCCAAGCTTTTTGTACAGCCTGTGGTAGTTCAAAACAGTCAGGGTAGTCTCAGTGAAACGGAGGATCAGCAGCATTACGTGTGTGCACCACGTACCCAACAGCGACGCATACTGACCACTGCGGGCACACTCGAGTTGAACGACTCACGTGAGATTGAGCCCCATACCAATGCCAGCAGTGCCAGCTCAGGTTCTGCACCCGAGACACAAATAGAGTACCAGCGGAGCTCACACCAGTCACCAGTTGCCGCCCACACCACACACTACGTTCATATGGCTCCACGCAATTCGGAGGTAGGCGAACAAGCTCCTCCAGGCACCCTGTATGCCTACCCCTCTGGCCAGATCATTTGTAGCAGCGAAGATGTGGCGGCCATTAAAATAGAAAACATTGAAAAGAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGATTTGTCACCGAAGATGGGCGCTTTGCCACTTCGGCGGGCACAGAGGGACCCAGCACCAATGTCTACTACGAAACAGCTTTGGTGGATGCCAGCGTTCATGCGAATGAGTCCAAGACCTACGCAGATCTGGGCAATGCCTATGCTTCCTTTCCGCCCAGTTCGAGTTTTGCCAGCAGCAACAGCTATGCGGCAGCCACCCTGCAGCAGGGCAACACCATCTATAGCATGCCCGGTACCGCCCAGTTTATTACAAAATCCGATCCCAACTTAAACCCTCTACGGCAAACGACCACTGGCACCTATCAGACCATTGCCTTTCTGGATGGCGGCAATCCCAATGATCCACCTATGTGGTCCACAGCTGGAGCCGATTACCAGAGCGTGCCCTTTACCAACTACCATTCACAGGTCATCGAGGACTATGCCCCAAGTAACATGACCACCAGTCATTGGGCCCCAGCTGGCTCTATTAGTCAGTACGATCCCAGTCTGGTGGCAGCCAGCGCTTCACCCTCCTCCCATGGACTAAGCGAGCACAAGTGCGACAATTGCCAATCGCCGTATGTGCGCAAGGGTGCGGATTTCTTCTGCCCCAGCTGTACGGGCTATGTGCGAATGCCGGCTCGTGTACCGCCCAGACAGGCCAAACCCAAAGCGGCCGCCGCACCCAACAACCGACGCAATGGGGTGACCTGTGCCAACTGCCAGACGAATTCCACCACCCTCTGGCGGCGCAACAACGAAGGCAATCCCGTGTGCAACGCCTGTGGCCTGTACTTTAAGTTGCACAACATGAATCGACCGCTATCCATGAAGAAGGAAGGCATACAGAAGCGCAAACGTAAACCAAAGAACAATGGCGGAGCTCCAATGCATCGAGCACCGTTGCCAAGCATGAACCAGGGAGTTAATTTAATGGTCAACAGTGGCACCCTTTATCCGTCACAAGTGCCGGTGAGCATGTTGAATAGCCAACAAAATGCCAGTCCTGAGCTGCATGATATGTCCACGACGGGACCGGCTGGCGGTGGTTCGCGTGTGGTGGCCATTGCATTGAATGCCTCAGCGCCGCCCACATCGGATGGTACTTTGAATATGTCGCGTCATCATGTGACAGGCGAGAGTCATTCCCCCTACAGTCAGCAACAACCTCCAGCACAGAGTCAATCGCCGCACTTAAATCGACAGATTGTCCAACCAGTTAATCCTCCCATCGAAAGCGGTCGTAGTTCCAACAGCGAACTGACTCCCAGCGTAATAACACGTACTGGTTTACCGGAGCGTTCATCGAATAACTAA
- Protein Sequence
- MVCNSLELDVKMQLKVKDYEEATSKAHNIQRLNISVVLQGKLSHFALKKKRQQFSKLFVQPVVVQNSQGSLSETEDQQHYVCAPRTQQRRILTTAGTLELNDSREIEPHTNASSASSGSAPETQIEYQRSSHQSPVAAHTTHYVHMAPRNSEVGEQAPPGTLYAYPSGQIICSSEDVAAIKIENIEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRFVTEDGRFATSAGTEGPSTNVYYETALVDASVHANESKTYADLGNAYASFPPSSSFASSNSYAAATLQQGNTIYSMPGTAQFITKSDPNLNPLRQTTTGTYQTIAFLDGGNPNDPPMWSTAGADYQSVPFTNYHSQVIEDYAPSNMTTSHWAPAGSISQYDPSLVAASASPSSHGLSEHKCDNCQSPYVRKGADFFCPSCTGYVRMPARVPPRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMNQGVNLMVNSGTLYPSQVPVSMLNSQQNASPELHDMSTTGPAGGGSRVVAIALNASAPPTSDGTLNMSRHHVTGESHSPYSQQQPPAQSQSPHLNRQIVQPVNPPIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -