Basic Information

Insect: Lordiphosa collinella
Gene Symbol: Znf574
Assembly: GCA_018904265.1
Location: JAEIFV010000252.1:260066-262173[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.07 3.4 8.5 0.4 1 23 295 318 295 318 0.97

2 10 0.24 12 6.9 0.1 6 23 328 345 328 345 0.98

3 10 0.0059 0.29 11.9 2.2 1 23 351 373 351 373 0.98

4 10 0.0002 0.0098 16.5 0.8 1 23 385 408 385 408 0.93

5 10 9.6e-06 0.00047 20.7 0.7 1 23 416 439 416 439 0.98

6 10 0.00013 0.0062 17.2 1.4 3 23 447 468 445 468 0.94

7 10 0.019 0.92 10.3 0.2 2 23 480 502 479 502 0.96

8 10 0.00012 0.0057 17.3 4.1 1 23 509 532 509 532 0.93

9 10 7e-06 0.00035 21.1 2.0 1 23 538 560 538 560 0.98

10 10 0.16 7.7 7.4 5.0 1 23 566 589 566 589 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.07	3.4	8.5	0.4	1	23	295	318	295	318	0.97
2	10	0.24	12	6.9	0.1	6	23	328	345	328	345	0.98
3	10	0.0059	0.29	11.9	2.2	1	23	351	373	351	373	0.98
4	10	0.0002	0.0098	16.5	0.8	1	23	385	408	385	408	0.93
5	10	9.6e-06	0.00047	20.7	0.7	1	23	416	439	416	439	0.98
6	10	0.00013	0.0062	17.2	1.4	3	23	447	468	445	468	0.94
7	10	0.019	0.92	10.3	0.2	2	23	480	502	479	502	0.96
8	10	0.00012	0.0057	17.3	4.1	1	23	509	532	509	532	0.93
9	10	7e-06	0.00035	21.1	2.0	1	23	538	560	538	560	0.98
10	10	0.16	7.7	7.4	5.0	1	23	566	589	566	589	0.97

Sequence Information

Coding Sequence: ATGGAAGCCTGTGTGCTCTGCTTTGGATGCTGCAGTGCAGCCTTAGGCTTGAATTCCCCCGAAGGAGAGCGACTCGAGATACGTCGAACTATAAACAAACATTTTGTGTTCTTCGAGTCGCCTCTGGCGGAGTCCCCCGGGAACTGCGAAGTCATTTGCCAGGATTGCTGGCAGAGTTTAAGCTCCTTCAGTGAATTCTATCAACGGGTCTTTCAGTTGCACCAGCAACGGCAGGTGGAGGGAAAAAGTGTGGCCATTGAGTTCTGTGTCGAAATTGAAGCCGTCAACCCACTGGCCGAGAGCGTCTTTGCTCCCAGTGAAGTCAAAGTGGAGGTAACTGAGCTAGAGCCCTTACCCAAGGTGGAGCTGCTCGAAGATCCTGTGAAAACAGAAAAACCAAATACCAAGCGCAAGATAAAGAAAGAAAAGCTACCGGCCAGCGATTCAGATGGGGATAGACCACTGGCAGATTTCCTCAGCTCTTCCCCCGCTGCAGGACCACTGCGACGCAGCACGCGTCGTGGTCGTCCACCCAAAATCCCAAAAGAATCTACAGCTTCGCCCACAACGCTCAAACAGGAATTTGATTCGGATGATGATCATGACGTGGACTTTGTTGCCGCCGAAGCTGTTCTGGGCACCGATGATAGCGCCAGCTCCTCTTCCAGTGAGAGCAGTGGTGACGATGCGGATTCCCTACCCGACATTGAGCCCGAGGAGCGTTTTGCCGAGATACCCAAGCGGGTGATCGTTAAGCCCAAAAAGTATCGCAAACGACCCAAGCCTTTGGTGGAGCCCGTGCGTATGAGTCGCGATGAGATCGAAAAGCGCAAGCTGCAGCAAATGGAATACGATGAGATTATCCAGCAGTTCTTCAAGAAGTTCCCCTGTGACAAGTGCAATCTGTTGGTCCAGAACTTTGCCGATATGCGACGACACCAGCGCATTTCTCATAAAATCGAATCGTGCTACATCATCTGCTGCGGCAAGAAGTTTTATTTGCGCAAAGCATTGGCGGAGCATGTGCTGGTGCATCAGAATCCGGAGCATTTCAAGTGTTCGCAATGCGAACGAGTGTGCCAAGACTCCCGCTCGCTGGAGCTGCATGAGCAGTCCCATTCGGAGACTGGTGGGACCAAGGAGAAGCGCATTTTTCAGTGTGACAAGTGCCCCAAGAGTTTCACTACCAAGGAGGGCATTGAATATCATGAGTTGTCCAAGCATGTGCCAAAATCCGAGTATAAATTCAGCTGTCCCGAGTGCAACAAGAAAATCCCCACCAAGCGCAATCTGAAGGAACACTTGCGTAAAGTGCATGACCCCGAGAAGGCTGTTATTTGCGATAAATGCGGCAAGACATTGCGTTCCCAAACGTATCTCAAGAAGCACCACGAGATCGAGCATTCAGAAACGCCACGACCCAAACCTGATCCAGTGCAGTGCGAAATCTGTGGCACTTGGCTAAGTCATATGTCTGGCCTGAAGCTGCATATGAATTCAGTACACGAGTCATCTGATGTGGAGCATCGTTGTCCCATATGCAATAAGACTTCGACCAATTCCCGTGCTCTCAAGCGTCACATCTATCACAATCATCAGTGCGAAAGGAAGTTCAAGTGTGGCTTGTGCGAGAAGGCCTTTAAGCGGCCACACGATTTGAGGGAGCACACCTCCACGCATACCGGAGAAGTACTGTACACCTGTCCCAACTGTCCCATGACCTTCTTTTGCAATGCCAACATGCATAAGCATCGTCAGCGATTGCATCGTGCCGAATGGGAGGCGGATCGGAAGAAACCTTTGCCACCTCACATGAGGAAAGTCTCGCAGAATGCCACCACGGCCATGAAGAAGCGTCTGGCTACTTTTTATACAGCAGCAGCTCAGGCGGCTCCAGCTGACTTTTCGCTTGCCCAGCAGCATTTGTAA
Protein Sequence: MEACVLCFGCCSAALGLNSPEGERLEIRRTINKHFVFFESPLAESPGNCEVICQDCWQSLSSFSEFYQRVFQLHQQRQVEGKSVAIEFCVEIEAVNPLAESVFAPSEVKVEVTELEPLPKVELLEDPVKTEKPNTKRKIKKEKLPASDSDGDRPLADFLSSSPAAGPLRRSTRRGRPPKIPKESTASPTTLKQEFDSDDDHDVDFVAAEAVLGTDDSASSSSSESSGDDADSLPDIEPEERFAEIPKRVIVKPKKYRKRPKPLVEPVRMSRDEIEKRKLQQMEYDEIIQQFFKKFPCDKCNLLVQNFADMRRHQRISHKIESCYIICCGKKFYLRKALAEHVLVHQNPEHFKCSQCERVCQDSRSLELHEQSHSETGGTKEKRIFQCDKCPKSFTTKEGIEYHELSKHVPKSEYKFSCPECNKKIPTKRNLKEHLRKVHDPEKAVICDKCGKTLRSQTYLKKHHEIEHSETPRPKPDPVQCEICGTWLSHMSGLKLHMNSVHESSDVEHRCPICNKTSTNSRALKRHIYHNHQCERKFKCGLCEKAFKRPHDLREHTSTHTGEVLYTCPNCPMTFFCNANMHKHRQRLHRAEWEADRKKPLPPHMRKVSQNATTAMKKRLATFYTAAAQAAPADFSLAQQHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00914786;
90% Identity: iTF_00917497;
80% Identity: -