Basic Information

Insect: Lordiphosa collinella
Gene Symbol: kipf
Assembly: GCA_018904265.1
Location: JAEIFV010000133.1:57015-69480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.9e-05 0.00092 19.8 4.9 1 23 159 181 159 182 0.95

2 17 1.1e-05 0.00056 20.4 2.3 1 23 188 210 188 210 0.99

3 17 1.3e-05 0.00066 20.2 0.2 1 23 216 238 216 238 0.99

4 17 7.5e-05 0.0037 17.9 4.0 1 23 353 375 353 375 0.97

5 17 8.2e-05 0.004 17.7 0.4 1 23 380 404 380 404 0.97

6 17 6.6e-06 0.00032 21.2 4.0 1 23 410 432 410 432 0.99

7 17 4.7e-07 2.3e-05 24.8 1.1 1 23 438 461 438 461 0.98

8 17 2.2e-06 0.00011 22.7 2.4 2 23 539 560 539 560 0.97

9 17 1.1e-06 5.2e-05 23.7 5.6 1 23 563 585 563 586 0.96

10 17 0.0025 0.12 13.1 0.1 2 23 619 641 618 641 0.96

11 17 0.037 1.8 9.4 8.3 1 23 690 712 690 712 0.96

12 17 0.011 0.52 11.1 5.5 1 23 716 738 716 738 0.99

13 17 9.6e-07 4.7e-05 23.8 3.2 2 23 744 765 743 765 0.97

14 17 0.0025 0.12 13.1 1.9 1 23 798 821 798 821 0.96

15 17 2.2e-06 0.00011 22.7 0.2 3 23 919 939 918 939 0.98

16 17 1.4e-05 0.00069 20.2 1.8 1 23 945 967 945 967 0.98

17 17 0.00093 0.046 14.4 3.2 1 23 972 995 972 995 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.9e-05	0.00092	19.8	4.9	1	23	159	181	159	182	0.95
2	17	1.1e-05	0.00056	20.4	2.3	1	23	188	210	188	210	0.99
3	17	1.3e-05	0.00066	20.2	0.2	1	23	216	238	216	238	0.99
4	17	7.5e-05	0.0037	17.9	4.0	1	23	353	375	353	375	0.97
5	17	8.2e-05	0.004	17.7	0.4	1	23	380	404	380	404	0.97
6	17	6.6e-06	0.00032	21.2	4.0	1	23	410	432	410	432	0.99
7	17	4.7e-07	2.3e-05	24.8	1.1	1	23	438	461	438	461	0.98
8	17	2.2e-06	0.00011	22.7	2.4	2	23	539	560	539	560	0.97
9	17	1.1e-06	5.2e-05	23.7	5.6	1	23	563	585	563	586	0.96
10	17	0.0025	0.12	13.1	0.1	2	23	619	641	618	641	0.96
11	17	0.037	1.8	9.4	8.3	1	23	690	712	690	712	0.96
12	17	0.011	0.52	11.1	5.5	1	23	716	738	716	738	0.99
13	17	9.6e-07	4.7e-05	23.8	3.2	2	23	744	765	743	765	0.97
14	17	0.0025	0.12	13.1	1.9	1	23	798	821	798	821	0.96
15	17	2.2e-06	0.00011	22.7	0.2	3	23	919	939	918	939	0.98
16	17	1.4e-05	0.00069	20.2	1.8	1	23	945	967	945	967	0.98
17	17	0.00093	0.046	14.4	3.2	1	23	972	995	972	995	0.95

Sequence Information

Coding Sequence: ATGGAGAACATTTGCCGGGTTTGTATGGACGGCTCTGTTACTCTAGTGGAAATTTTTGGTGACGAGAGGGAGGAGGAGGAGCTCGACCCGGAGAAGAATCTGGCTTATGTGCTCAATCAGTGTGCCAACTGTCAAGTGACACGAGGTGATTTATTGCCGCACCAGATATGCTTGTCCTGTGTGTTGGCCGCTCAGAATGCATTTCGATTTAAGCAAAAATGCGAGGAGAGCTACGAGCATCTATGCCAGCTAATCGAGCTGGGCAGGCGACAGGAGCAGCGAGATGATACGGAGATGGTTCAGATGGAGGATGGCGTCCATGTGATGGATGTGACGTGCATCAAAGTTGAACCTGGCTTAGAGCCGGAACTGCAAGATGAGATCATTCCATCACAATTTGTCAAAACCGAAGACTTATCCATGCCACCAGCTGAGGAGCAGTTTGATCTGGCTAGACCCTTTGAAAATGCACCCCATCCCTGTGAGATGTGTGGCAAATGTTTTCGTGGCCGTTTCGAGCTCAACAATCACATTCGCGTACATCATACGGGCGAACGTCCGTTTAAATGTCCCCATTGTCCCAAGACCTTTTCGGTGCGTCTCTATATGAGGAATCACATTCGTATCCATACTGGAGAACGACCTTATAAGTGTCCCATGTGCCCGAATGCTTTTACCTTGCCGAATACACTGAAGGCACACATACGCAGGCATGCGGGTGCCGGGAATCGTTTGCTTTCGCGCAAGCTGTTTCATTGCGATTGCTGCTCGGCTGCCTTTCGGGAACATTATCGTTTGCGGCAGCACAAGCAACTGAAGCATCGCATGAGCGAGACACTGGCTAAGGAGCAAGGAAAACTCACTCAAAGATCGTCTCAACCCCCACCGGAACGTGAATTACCAATTAGACCAGCTGCAGGCGTTCACCGGCAAATCGTTGTCGAGGGGAGTCATGTCGAAATCAAGAAAGAGCCAAATGAAGGGGACTCGTTTCCCAACGAGTTTCTATCCAAAAATGAGGATCCCACCATTACCATCCAATCTCCGGATAAGAATTTCTGCTGTACGACTTGTGGCAAGCGTTTCCAATACAGATACGCTCTGACCAATCACATCCGCTGGCATATGGTACGCCCCCATCCGTGTCCTAAAGCCGAATGTCCGCAAGCATTTCGAACTGAGGCCAAACTAAAGATGCACCTACGTACTCATGCCGCGGATTGGCCTTACAAGTGTAAGGAATGTCCAAAGGGATTTTACAGTAACTGTAAGCTCAACGAACACATGCGGACCCATACTGGCGAACGACCGTACAAGTGTCCGCATTGCCCCAATGCTTTTACCCAGAAAAATAATTTAAATCGTCACGTTCGTATTGCGCATGTGCAGCCAGACCGAGACTTCGAAATGGAAATACCCAGGACCCAACCACAGAGAATCCATAACCAAATGACAGGCAGAATGCATAGCCAAATGGCAGAGGAGGAAATCATTCCAAGTTCACACCACCAAGTCGTTAAAGAGATTAAAACTGAAAATCAAGATCGCTCGTCTTTCTACATGCCAGATGAAGAGGAAATTCTGCCAACAAATGATTCCAATCACGCAGCTGGCAGTTGTCACTTATGCGGCAAAAGTTTTGCTAACCGTTTCAGCCTAACCAGACACATACGCGGCCACACCGGCTTCCAGTGCCCTCACTGTCCCAAGGGATATACCCAGAGCCATAATCTAAAGACCCACATTCGTATACACCACAGCCAGGCGGCAGAAGGCAACTCTGACAACTCTGACTATTCTGACTCCAACAAGAAAACTCCTGCCAAGAATCTAACGAAGCCCACTCAGAGCATTCGCTGCCCCTGGTGTCCAATTGCATTCAAGGATCAGGTTAAAGCGAAGTTACACATGCAGGTGAAGCACAAAAACCGAATGGCTGCAAATGGTATGGATGTGCCAGCTGAAGAAATAATTGCTAGCGCCGATCCAACACCTCTAAAGGCAGAAAAGAAAGACACGGAATGGGTGCCCTATCAGCCGAGAAAGCAAACGCAATCCCAGAAGACTCATGTGTGTGGATCATGCTGTAAAACGTTTTACCGCAGACATGACCTCACCAGACATGTTCGCACCCACCAGCGGCCCTACAAGTGTGCCCACTGTCCCAAATTGTTTCAGCTACACAGCAAACTCAAATTGCATTTGCGTCGTCACACGGGCGAACGATTAAAGTGTCCTCTTTGTCCTTGCACCTATACACGAAGTGATAATTTGCGCAAACATATGCGGAGGCATAAACATCGAGAGGATCTTCCTGGTGCAGTGCCAGATGTTGCTGGCACCTCGGCAGCGGATAGTGAGGTAAGCGTACAGACGGGGGAGGGGGAGCCCTATAACTGTGAATTGTGTACCGAGAGTTTTGAATACAAATACTACCTGCGACTTCATAAACTTATGAAGCACGGCATCAACGAGGAGGAAGATGGCCAAGAGGAGGACGTGGAACCTTTGGCAGAACAAAGAATGCAGCTAGGCGACGCGGAACAACAACAACAAAGCTTACGGTTTCGAGAAATACGAAATAGACCTGGAGTTGGAGCTTACGAAGAGCTGGAATGCGAAGATATGGATATGGAATGGCGTCGCTTAAACAGAAAACAGAAATTGAATTTAAATTTCATTCAGCAACCAATGATTGAGCAGCTGCCGACACCTTTCCTTCCGGAGGTTCAGACTATGCTTAAATCAAATATCTGCCCATTTTGTGGAAAGAGCTATGTCCGCAAGGCGAGCCTAAATGTTCATCTGCGCTCTCACACTGGCGAACGCCCTTACCAGTGTCGATACTGTGAGCTGCGCTTTAACTCAAATGATACATTACGAAGACATCTCCGTGGTCATACGGGCGATCTATTCCGATGCAATATGTGTCCCAAGACCTACACCGATAAAAGTACACTACGATTCCACAAGAAGGTGAAGCACGGCATTAGGGAGGAGCATTCCGTCTTCTCGAAACGTTTGGTAGTACGAATGCATCGCATTCGATGGCCGCCGATCATAAAACAAGAAGCGCTAAGCGCTTTTGAGTAA
Protein Sequence: MENICRVCMDGSVTLVEIFGDEREEEELDPEKNLAYVLNQCANCQVTRGDLLPHQICLSCVLAAQNAFRFKQKCEESYEHLCQLIELGRRQEQRDDTEMVQMEDGVHVMDVTCIKVEPGLEPELQDEIIPSQFVKTEDLSMPPAEEQFDLARPFENAPHPCEMCGKCFRGRFELNNHIRVHHTGERPFKCPHCPKTFSVRLYMRNHIRIHTGERPYKCPMCPNAFTLPNTLKAHIRRHAGAGNRLLSRKLFHCDCCSAAFREHYRLRQHKQLKHRMSETLAKEQGKLTQRSSQPPPERELPIRPAAGVHRQIVVEGSHVEIKKEPNEGDSFPNEFLSKNEDPTITIQSPDKNFCCTTCGKRFQYRYALTNHIRWHMVRPHPCPKAECPQAFRTEAKLKMHLRTHAADWPYKCKECPKGFYSNCKLNEHMRTHTGERPYKCPHCPNAFTQKNNLNRHVRIAHVQPDRDFEMEIPRTQPQRIHNQMTGRMHSQMAEEEIIPSSHHQVVKEIKTENQDRSSFYMPDEEEILPTNDSNHAAGSCHLCGKSFANRFSLTRHIRGHTGFQCPHCPKGYTQSHNLKTHIRIHHSQAAEGNSDNSDYSDSNKKTPAKNLTKPTQSIRCPWCPIAFKDQVKAKLHMQVKHKNRMAANGMDVPAEEIIASADPTPLKAEKKDTEWVPYQPRKQTQSQKTHVCGSCCKTFYRRHDLTRHVRTHQRPYKCAHCPKLFQLHSKLKLHLRRHTGERLKCPLCPCTYTRSDNLRKHMRRHKHREDLPGAVPDVAGTSAADSEVSVQTGEGEPYNCELCTESFEYKYYLRLHKLMKHGINEEEDGQEEDVEPLAEQRMQLGDAEQQQQSLRFREIRNRPGVGAYEELECEDMDMEWRRLNRKQKLNLNFIQQPMIEQLPTPFLPEVQTMLKSNICPFCGKSYVRKASLNVHLRSHTGERPYQCRYCELRFNSNDTLRRHLRGHTGDLFRCNMCPKTYTDKSTLRFHKKVKHGIREEHSVFSKRLVVRMHRIRWPPIIKQEALSAFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919971;
90% Identity: -
80% Identity: -