Lcol010087.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- CSRNP1
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000039.1:653838-654644[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-22 1.3e-18 67.9 0.1 3 57 73 127 71 131 0.93 2 2 2.3e-43 2.5e-39 135.7 13.0 91 218 128 263 124 263 0.90
Sequence Information
- Coding Sequence
- ATGAATTGTTGGATTGCCCGTGGCCGGAAGGCCCTAGCTGGGAAAGCAAATAACGAAAAGCCAGTACGGAAAGAGACCTCAAAGGAGCAGGCGCAGCGATTTCTTATCTGCAGCCCGGTTAAAATCATCAAAACGATTTTTAAAAGACTTCCTACTTTTGAGAATGGCAAGCAACTGGCTCTACCAGACGTGGCTGCGCCAAATCCAAGACGATATAAACGATCCATTAGCTTTGACACCGTCAAGATATACTACTTTCCTCGCCAGCAGGGTTTTAGTTCCGTCCCCAGAGATGGAGGATGCACTCTGGGCATGGGTGCCCACCACATTGCCTTTGAAACGATGTCCTTGGAAGAGCATCGCGCCCTGCTAAGGCGTGCTAATGTCTCTACTAGTGATTCCAGCGAAGAAAGTATCTCGGTTGCTGATGATGGTTCGAATGGCCGCCCACAGGCTTTGACGGTCCCACAGAGGCGAGCTCTGCTCCATGCATCCGGCGTGCGCCAGATAGTTGCCAGCGAGACGATTGAATGCCGGGAAATACGAAATTCACGTGCAAATTGCGGCTGTTCCTGTGAAGAATTCTGTGATCCGGAGACCTGTGCCTGCAGTCAGGCTGGCATTAAATGTCAAGTGGATTACGATAGCGACAGCGAAAGCGATAACTCCGTGTCTCCGTGTAGGTGCTCGCGAGAGGCGTGTGGCAACAAAGTGGGTCGAGTGGATTACAATCGCAAACAGATTTCTAAACATTACTCTCAAACAAAGACGCGCCTGGATCTGGAACAGTCATTCAACCAACATTGA
- Protein Sequence
- MNCWIARGRKALAGKANNEKPVRKETSKEQAQRFLICSPVKIIKTIFKRLPTFENGKQLALPDVAAPNPRRYKRSISFDTVKIYYFPRQQGFSSVPRDGGCTLGMGAHHIAFETMSLEEHRALLRRANVSTSDSSEESISVADDGSNGRPQALTVPQRRALLHASGVRQIVASETIECREIRNSRANCGCSCEEFCDPETCACSQAGIKCQVDYDSDSESDNSVSPCRCSREACGNKVGRVDYNRKQISKHYSQTKTRLDLEQSFNQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -