Lcol006884.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000090.1:187113-193259[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.6 6.3e+03 -2.9 0.7 84 103 57 73 17 100 0.48 2 2 2.4e-94 2.5e-90 302.4 9.7 2 218 294 497 293 497 0.91
Sequence Information
- Coding Sequence
- ATGGAGAGCATGTTCAGTCCGATTAAGAAGATATTTACATATTTACAAAAGAATGCAACCAGCGCGAATATGTTCGGACAAACTGGAACGACGACCGAATCAACAACAACAACCACAAACGTAATTGCCGAGGAAGAAGGCGCCAACGTTTCTAGTAACCCGGAGGAGAAGGAATCAGAAATCGAATTGGTAGTTGAACTGCAGGACGAGGAGGAGGATGACATAGAGCGGCAAATTAAGACTTCGATTATAGATGCCAGCAAAGTGCAGGCGGTTAAAGCTAAATCCCTGGCTCTACAGCTCGATGATGAGCTGGCCGATTTTGCTCACGACCCGGAGGAAATAGTTCCAGTAGCGTCCACAGTGCAAGAAGAAGGAGTACTGGAAGAGCTGGTGGATGAGCTCGAGTTGGATAATTTCCACAATGATGAGATTATTGTTATAGATTCCGATCTAAATTCATCATTGGCCTCGGATAATGTGTCCGAAGACCCATTGGCCATAGATACCATATTGGAGACTTCATCGGTGACCACCAATGAGGAGGTGGATACCAGTGGGGATTTGCTGTGGCTCAAACTAAATCCCGATACTGAGGAAGTGCGAGTGTCTCATAATAATCATCAGGAGCCACCCTTGCAGGAGGAGCAGGAGCCGCCGCCAAAGACCAAAGAGGAAGAGTTACGTAGCAGCAGCGATGGTGGCTCTGATTCGGGTCTGGGCAATGATCCTACACCCACACACACCACCACCACCACCAGCCCCTCCAAACCCATCAGATCGAATCTGAAAAGACGCCTAGATGTTGAGGATGGCATGGAACTGGCTCTGCCGGATATGGCGGCCTCCGGGTCAGCCAGCACGCCCCAACAAAAGCGTCCCAAACGTTGCATTAACTTTGACAATGTCAAAATCTACTATTTTCCACGCCAGCAGGGCTTCAGTTGTGTGCCCACCGCCGGCGGTTGCACTCTGGGCATGGGTGCCCGGCATATTGCCTTCAAGACCCTTACCCTGGCCGAGCATGCGGCCGAGCTGAGGCGTGCCCATCGCAGCCAAAATCAATCAGATTTACAACCCCGTGGTTCTAGCAGCGACGACAGCGAAGAATCTGAGGAGGATTACCTAAGCGAGGGCAGTGGTTCGGATGCCGATGATGGCTCCAATGGCTTCCTACAGCCCGTAACGCCCAAGCAGCGGCGAGCTCTGCTCAAAGCAGCCGGCGTGCGCAAAATTGATGCCAGCGAGAAGATTGAATGCCGAAATATACGCAATTCGCGTGAGGTGTGCGGCTGTTCGTGTCGAGAGTTCTGCGATCCGGAGACCTGTGCCTGCAGTCAGGCTGGCATTAAATGTCAAGTGGATCGTGCCATGTTTCCCTGTGGCTGTTCGCGCGAGGCGTGTGGCAATACCGTGGGTCGAGTGGAATTCAATCCGACACGAGTGAGGACACATTACATACACACCGTGATGCGTCTGGATCTGGAACAGCGGCAAGGAGTGCAGGGACAGCTACATCATCATCAGCAGCAACAGCAGCAGCAGGCTACCTACTCCGGTGTATCATCCAATGCCCAGCCAGCCTCGAACCACTGCTATTTTATGCCCACGCAATCGAATTACAGTTCGGGCTATGCCTCACCTGCCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTACTGCGAATCCTCAACAGAATCAAAACGCTTACTCTAGCTATACTCAATTGGATAGCCTGGATTCGGGTCTGTTTGTAAGTGGTAGCAATGCCACACCCTCCTATGGTGAACTCTATCAATCGCTGAGCTATGGCAGTGCCCAGCTCACCTCCTATCAGTCCACCTACCAGCATACACCAACCGCTGCCACCAATGGCTCCTCTGCTGTCACGCCCAGTGCTTACAGTTCTTGTGCTGTGCCCTCGGCACCGCCTTATGGAAATGCCACCACAACAGCCTCCTCCAATGCCCAATATCAAACCACCGCCTCAATGACAGCTGCCTCAACGAATGGGAGTTGTGCCTCGCGCCTCACTGGCAATTCTTCGACTTCCTCCACCGTCACCGCCGCAGCCGCCGCCGCCTCATCAGCAGCAGCAGAATTTATAAGCCTCAATGCATCCAATTCCAGTTCCTCACGCCTGTCGCAGATTAATGACTTACTACAACATAATCGTAGTACCACAGCTGCCCTGGTGGCCGTCTCCGAGGCTTATGGTGGTGGTGGTGTTATCAGTGCCACGAGTACGAGTTCCACCACACTTGATTCCATAGACACGCCACCCATTCTGGAGGATGTGCAACGTAGTTGTATGAACTTTGAGGAACTGCCGCCGCCTTTGGTCAATCCCACTCCCATAGTGGCTGTGGTGGAGACTAAACTACCACCCACAGTGGCCACTATCAGCACCTCGCCAGCCACACAAGGACCACAGCCACGTCAGCCGCTGGATGTGCAGACCACCACCACATAG
- Protein Sequence
- MESMFSPIKKIFTYLQKNATSANMFGQTGTTTESTTTTTNVIAEEEGANVSSNPEEKESEIELVVELQDEEEDDIERQIKTSIIDASKVQAVKAKSLALQLDDELADFAHDPEEIVPVASTVQEEGVLEELVDELELDNFHNDEIIVIDSDLNSSLASDNVSEDPLAIDTILETSSVTTNEEVDTSGDLLWLKLNPDTEEVRVSHNNHQEPPLQEEQEPPPKTKEEELRSSSDGGSDSGLGNDPTPTHTTTTTSPSKPIRSNLKRRLDVEDGMELALPDMAASGSASTPQQKRPKRCINFDNVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTLTLAEHAAELRRAHRSQNQSDLQPRGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKIECRNIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCSREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQRQGVQGQLHHHQQQQQQQATYSGVSSNAQPASNHCYFMPTQSNYSSGYASPAYXXXXXXXXXXXXXXXXXXXXXXXXXXXGTANPQQNQNAYSSYTQLDSLDSGLFVSGSNATPSYGELYQSLSYGSAQLTSYQSTYQHTPTAATNGSSAVTPSAYSSCAVPSAPPYGNATTTASSNAQYQTTASMTAASTNGSCASRLTGNSSTSSTVTAAAAAASSAAAEFISLNASNSSSSRLSQINDLLQHNRSTTAALVAVSEAYGGGGVISATSTSSTTLDSIDTPPILEDVQRSCMNFEELPPPLVNPTPIVAVVETKLPPTVATISTSPATQGPQPRQPLDVQTTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919810;
- 90% Identity
- -
- 80% Identity
- -