Lcol007474.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- crm
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000004.1:54321-58043[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-09 7e-06 26.3 0.0 1 44 84 140 84 142 0.96 2 2 1.3 2e+03 -0.8 0.0 9 25 264 280 263 285 0.89
Sequence Information
- Coding Sequence
- ATGGAGGAAATCAAGCAAGAACCTCAGCCGGCGGCAGCGGCGGCGGAACCCGAGGAGGAGCTGCTGGGCTCGGTCATAACCTTGTCGCACAACTGTCCCGGCACCAGGGCGAGCGCGCGGGTGATACAGAAAATGAAGCTGGATCAGTCGCGTCCGATGACACCGCCGCCAGTGGAGAAGGAGCACCACTCCAGCAAGAAGGATGACAAGCTGAATCAGAAGACACCCTCGCAGCCCAAACCGGGACCCAGGACCAGCTGGACCAATGTGGAGCGCAATTGCTTCTTTGATGCGCTGAATGAGTTTGGCAAGGATTTCGAGGCGGTGGCGCAGTGCATTAATGGCAAGCTGAAACGACGCAATACCAGCGACAGCTACAGCTTCAAGACCAAGGATCAGGTTCGCCAGCATTACTACCAAACGTATCACAAGATATGCAAATATGTGAGGTACTCGGAGGAACTCAAAAAGCCCGCCCAGGAGCTGTACACTCTGATCAACTATGGAGAAATGCGACGCAAATTGCAATTCCTTACGGAGAAGCATTTCATGAAGCTGAAGTTTCTCGTCTACCAGGGACAGATTGTGGTGCGTTGCAAGGGCAAGAATATACGCATTAAGACGCCCTCTTGCAAGGCTCTCAGGAGACTCAATCAACTGGATGACTGCCTGGAGGACATACGCCTGCCCAGCAAGATAGAGGTGTTTGTCACCCCCTCGAATATGGAATCCTTTGGCCGGGTACAGCTGCTCGCACAGAATCCACGTGGACGTGCCATAGTGCCGCTGCACAAGAAGCTTATCAGTTTTATACAAACTTTCGAATACAAATGGCGCAGCACACAGCAGCGTTTGGCGGAGGAGCTTTCACCGCCGGCCAATCCCTGCATCAGCAGCAGCACCGACAATCAGGAACCGACCCCTAAGGCTGCTCCCGCCGTCACACCCGCCACTCCCGCTCTCTGTTTTCATCCCAAGCCAGGAGTGGCCATACATCGTCCTCTTTTAAGCATTACCGCCTACCTGAACAGTGTCAATATATGCCTTACCGCCTATGAAGAGCGTCTGGGTGTCAAAGTGCGCAGCGAAAGTTTGCTCCAGCAACCATTAGTGGTGGTCACTAAGCGTCCACGCACCGAAAGTGGCTCCGAGAAACGTTCGCCCGAGTCCAAGAAACCCAAATTGTTGTTACCCGCCACCGTCGCCGCTCCTGCTCCCCTAGATAAATCCTTAGACGAGGCATTGGCCGTTAAGGTGGAACAAAGCAGCGGGGATGAGTTGAGCGAGGAGATACAAGAGTTTTTATCCTTGACTGAAAATGCCGCTCCGCCTCCACCACCACCACCGCCGCCTGCCCCTGCTCCTGCTCCGCCCCGCTCCAAGCGTAAGGAAGCCAAAGAGGCAGCCGCTGCGGCGGCAGCACGCAATTTCAAGCCTTTGCTAAACGATGAGATTATCAAACGCATACGCAAGGGTTGGACCTTGAACAATGCAGCCGATATTACCATAGGCGATCTGTATGTGGTGCTGGGCCAGGATTCCAAGCTGGAACTGGAGTACTATTGGTGCGAACCAGCCAGCAGCAGCAGTGCCAACTCAACAACGCTCACCTCCACTCCCACCTCCACCTCTGGCTCCGGCTCCACCTCTCTGCCCTACAATACCAATGACTGTGATAGCGTGGAACGCGTCAAGGCGGTGACCACTTCAACGGTTAGCAATAAACTGAAACATCTGCTGCTGGTTGCCAATCTCAGCGAGCGTGTACGCAAGCGCCAATGCAATTGTGGCCACATTTGTGATCGGAAACGGGACTTGATCAATAAGGCGCAACAATTGGTGGCCGCAGCTGCTGCGGCAGCTGGCAACGGCGGTGGTAATGCAACTGCAGGAGGTAGCAACAGCCACAGCGGTGAGGTCATCTTTCGTACACCCATGCTACCGGTGCGACGTCCCATGGCGAATATTATGGATCCAGTTAAACAGCTGGCGGCGCTGACACGTCAGAAGATTAGCCGCCAGGTTTTGGTGCAACGTCGTATCCTACAGCCAGCTGCCTTGGGCGGTAGTCCGTATGACTTATTGCATGTGCGTCATTTGCATAGTGGTCGCTTTGAGCCCATAACCACGGTGCAACTACCGCAACAGGAGGTAGCCAGTTTGGCGTCCAACGAGCAGCCATCACAAAGTGAGGAATACGAGGAAGAAACGGCAGAGGCAGCAACGGGAGCTCCAATTCGTGGTCCAAATATGCCAGACTTGGATTTTGGTTCCAGCACCAGCCAAGCGGAACAACTGACGTCTACTTCGACCAGCAATTTACCCGAAGGCGTACAGGATGAGACCACCACTGAAAACTTCTTCAATGGTAGCATGAGTCCCATGCATTTGCTAAGAGATTCCACTTCCAATGCACGCTGGCTGGAGGAAAATGTGAATGATTTTTCATTGACCAGTTTATTGGGTCATTTGGATGAAATAGATGCCACCAGAGACATACTGGATCCCTCATCTAGCATGTCGGTGTTGAGTGAAACCAGTGTGGACTTTCGTCACAAATTCCAGGAAATTGCTGCTTTATTACAGCAACAGGAGAAGGATTAG
- Protein Sequence
- MEEIKQEPQPAAAAAEPEEELLGSVITLSHNCPGTRASARVIQKMKLDQSRPMTPPPVEKEHHSSKKDDKLNQKTPSQPKPGPRTSWTNVERNCFFDALNEFGKDFEAVAQCINGKLKRRNTSDSYSFKTKDQVRQHYYQTYHKICKYVRYSEELKKPAQELYTLINYGEMRRKLQFLTEKHFMKLKFLVYQGQIVVRCKGKNIRIKTPSCKALRRLNQLDDCLEDIRLPSKIEVFVTPSNMESFGRVQLLAQNPRGRAIVPLHKKLISFIQTFEYKWRSTQQRLAEELSPPANPCISSSTDNQEPTPKAAPAVTPATPALCFHPKPGVAIHRPLLSITAYLNSVNICLTAYEERLGVKVRSESLLQQPLVVVTKRPRTESGSEKRSPESKKPKLLLPATVAAPAPLDKSLDEALAVKVEQSSGDELSEEIQEFLSLTENAAPPPPPPPPPAPAPAPPRSKRKEAKEAAAAAAARNFKPLLNDEIIKRIRKGWTLNNAADITIGDLYVVLGQDSKLELEYYWCEPASSSSANSTTLTSTPTSTSGSGSTSLPYNTNDCDSVERVKAVTTSTVSNKLKHLLLVANLSERVRKRQCNCGHICDRKRDLINKAQQLVAAAAAAAGNGGGNATAGGSNSHSGEVIFRTPMLPVRRPMANIMDPVKQLAALTRQKISRQVLVQRRILQPAALGGSPYDLLHVRHLHSGRFEPITTVQLPQQEVASLASNEQPSQSEEYEEETAEAATGAPIRGPNMPDLDFGSSTSQAEQLTSTSTSNLPEGVQDETTTENFFNGSMSPMHLLRDSTSNARWLEENVNDFSLTSLLGHLDEIDATRDILDPSSSMSVLSETSVDFRHKFQEIAALLQQQEKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919763;
- 90% Identity
- -
- 80% Identity
- -