Lcol006039.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- Myb
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000419.1:218429-220108[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-12 4.1e-09 36.6 0.3 2 46 63 107 62 107 0.96 2 3 6.6e-19 9.9e-16 57.8 0.4 1 46 113 159 113 159 0.97 3 3 1.3e-21 2e-18 66.4 0.2 1 44 165 208 165 210 0.96
Sequence Information
- Coding Sequence
- ATGGCTGGCATCGAGAGCAGCAGCAGCATAAACAACGAGAACAATAACGAGGAGTACCCCGAGGAATACGAGGAGTCTGATGAATACTCGGTCAGTGGGTTGCCTGGTCCGCCAGACGCCTCCGCTCAGCCGCCAGTCGCTGGCGGCCCCGCACAGATCAAGACACACTTATCCTATGGCTTCGGCAAACGCTGGTCCAACTACGAGGATTATCTGCTCAAAGCGCTGGTGAAACAACACGGCGAGCGGTGGGATCTGATTGTGCCCCAGTTCCCGGATCGGCTCGAGCACCAGGTTCAACTGCGCTGGGCCAAGGTGCTCAATCCAGAACTCATCAAGGGTCCCTGGACACGGAACGAGGACGAAAAGGTAATGGAATTGGTGCGCCGATTTGGTCCTCAAACGTGGACACTGATCGCTAGCTACCTAGATGGGCGCACCGGGAAGCAGTGTCGCGAGCGGTGGCTCAATCATCTCAATCCCAACATCAAGAAGTCTGCCTGGACCGCAGAGGAGGACAAGATTATCTACCAAGCCCACATTCAATTGGGCAATCAGTGGGCAAAAATAGCCAAATTGCTGCCTGGACGCTCCGACAATGCCATCAAAAACCACTGGAACTCCACAATGAGGCGCAAATACGATGCAGAGGGCAGAGCGCTAACTGCAGGTGGAGCGGGAGCAGCCGGCGGCATTGTAGTTGAGGATGGGGATCTGAGGAGTTCACGTACACATCTCAACACGTTGATCACAGGAGCAACTGTTCCTCCTGCAGCTGCGCCGCCACCGAGTGTGGAATCCGCATCAGCTGCTCAGGATCAGCCTATGCTCTTGCACTTCGCAGAGCTGAAGCGAAAAACTCCAAATATTTTAAAGCGCTCGCGCCAAAAAACACACGTTCCTTTACCACAGGCAACTCACAGCGGCGACGTCAAGCGTCTGCCCTTCTCGCCCAGTCAATTCCTTAAGTCGCCCTGCCTCACCAGCTTCGAGGATATGAATCTGCGCGCCAGCACGCCCGTTGCCAAGACCTGCCAAGAGCCGGGCAACTCGTCTATTGAGACACCACATAAAAGCATGATTGGACCGCGAACACCTACTCCATTCAAGAATGCCCTAGCTGCTATTGCCAAGAAGCGGGACGGACGTCGCTACGAGCCCTCTAGTCCATCCAGTCTGGTCGAGGATCTTAATGAAATCATCATGAAGGAGCAGTTAAACGATTCGGAAACGACGCTGACTAGCGTTGAGCGCAATGGTCCGTCTGGCGTTGGCGCGGTAAAGGCCAAGTCGCCGCCTCCGAAACGTGCCCGCAAATCGCTGGTCACCAGCTGGAGCGCCAACATTATGACGCCACCTTTCGAGATGAAGACGCCGAGCAAATTTCTCGCCTCGCCCAGCAACTACATTATGAAGGATGATACGTTGTGCAGCGAACAAGATCTGTTCGACGAGGGAACGAAGGAGAACACTGTGCCATACAGCCGTATCAGTGGCGGCGGTGCCCTAAATAGATCGGGTTCGAATCGTGGGACGTACGAGCATGTCATTGATCCGAAATGGGCGCGCGTTGCCTGCGGCAAAACCAAAGACCAACTGTTCATGGAGAAGCAGGCCTATGCCTGTCTAAAGAATCTCTCCTTGATACCGCGGTCACTCAACTTTGAGAAGCAAAAGTGA
- Protein Sequence
- MAGIESSSSINNENNNEEYPEEYEESDEYSVSGLPGPPDASAQPPVAGGPAQIKTHLSYGFGKRWSNYEDYLLKALVKQHGERWDLIVPQFPDRLEHQVQLRWAKVLNPELIKGPWTRNEDEKVMELVRRFGPQTWTLIASYLDGRTGKQCRERWLNHLNPNIKKSAWTAEEDKIIYQAHIQLGNQWAKIAKLLPGRSDNAIKNHWNSTMRRKYDAEGRALTAGGAGAAGGIVVEDGDLRSSRTHLNTLITGATVPPAAAPPPSVESASAAQDQPMLLHFAELKRKTPNILKRSRQKTHVPLPQATHSGDVKRLPFSPSQFLKSPCLTSFEDMNLRASTPVAKTCQEPGNSSIETPHKSMIGPRTPTPFKNALAAIAKKRDGRRYEPSSPSSLVEDLNEIIMKEQLNDSETTLTSVERNGPSGVGAVKAKSPPPKRARKSLVTSWSANIMTPPFEMKTPSKFLASPSNYIMKDDTLCSEQDLFDEGTKENTVPYSRISGGGALNRSGSNRGTYEHVIDPKWARVACGKTKDQLFMEKQAYACLKNLSLIPRSLNFEKQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -