Lcol000950.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- ct
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000542.1:34746-68467[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-27 4.9e-23 81.2 0.0 3 72 489 559 487 564 0.95 2 3 4.6e-32 4.9e-28 97.2 0.0 3 77 964 1039 962 1041 0.96 3 3 2.8e-31 3e-27 94.7 0.0 3 76 1225 1299 1223 1302 0.96
Sequence Information
- Coding Sequence
- ATGGCTGCTGCTCCTGCTGCTAGTCGTCATCTTCATCATCCGCAACGCCAACAACAACAAAGTCTTCAACGCAAATTACGCGTCGTCAAAATAATTGCCGTGGGTCGGTCAAATGCGCCGACCAGGCACACCAAACCAAGTGGCAAGCTGAGCACAGTGGTGCAGAGAAATGAAAAAGAATTTGGCAAAATTAAAGCACTTTTGGATGAATTGCAGCGCCTGCGTGCCCTGGAACAAACTCATCTGGTACAAATTCAACGACTTGAGGAACATTTGGAGGTCAAGCGACAGCATATCATGCGACTGGAGGCCCATGATGACGAAGAAGATGATAATGATCAACGGCAGCAGCACAACGAAACTGGAACTGATCGTCATGCTGAACAGGATGAGGATGAGGAGAACGATGAACAGGATATGGAAATGTCCGCAACCAATAACCATCCAAACGAGGGCAATGAGTTGAAAATCAAAAAGGAACAGCACAGTCCCTTGGATCTGAATGTGCTAAGTCCACAATCGGCTATTGCCGCTGCAGCTGCAGCCGCTGCTGCTGCCGCCTGTGCCAATGATCCCAACAAATTTCAGGCTCTTTTATTGGAACGCACCAAAGCTTTGGCCGCGGAGGCTTTGAAGAATGGTGCAGTTGCCGCTGCAGCCGCTGCAGCAAGCGAGGAAAAGACGCTTGAAGCTGCAGAGGAAGCAACCAAGAATGAAACAGCCGAGAAAAAAGCTGCTAATGCTGAGCAGCAGCAACAACAGCAACAGCCGCCACATGCAACACTCGAAGAGCAGCTGGTCAACAGCTATTGGAGACGTGGCTTTGAGGGAAATGGCAGCAAAACGCCAACAATTTATCAAAATTCGCTGCCGCCTCCGCTGCCGCCGCCACCCACTGCAGCAGCAGCTGCAACTCTTACTACCCCCAGCAACAACAACAACAACAACAGCAACAACCTCAACATGGACCCTCGTCCACTGCTTTGCTCAGTCAATTGCCAATTGTTGCACCAGGCCGCGGCCGCTGCCGCCGCTGCCCATCAATTCGATTCCAATTCCTCAACCAGCTCGACCAGCACACCGAACAGCACCGCCCAATTGGCCGCCAGCATAGCCAATAGTAGCAAGTCCCTGCTCCAGGCAGCCGCCGCTGCCGCCGCCGAGGACAACAACAACAGTTTGACACCCAATGCAAATGCGGCCGCCGCTGCCGCCGCCATGGCCGCCCATGCCCAGCATGCCGCCGCTTTGGGTGCACCCGGTTTCTTGCCGTTCCAATTTGCCGCTGCTGCAGCGGCCGGACAAGATGCGCGTGCCCATTATCGTTTCGCGGATGCGGAACTTCAACTGCCACCGGGCGCCTCAATGGCTGGCCGGCTGGGTGAATCGTTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAATATGGACAAGTATGCCAATCAGGCATTGGATACGCTGCACATATCCCGACGGGTGCGTGAATTGCTGTCGGTGCACAATATTGGTCAGCGTCTGTTTGCCAAATACATATTGGGCCTGTCACAGGGCACCGTGTCGGAGCTGTTGAGTAAACCCAAGCCCTGGGATAAGCTAACGGAGAAGGGACGTGACAGTTATCGCAAGATGCATGCCTGGGCGTGCGATGATAATGCGGTAATGCTGCTCAAATCGCTTATACCCAAGAAAGATTCTGGTTTGCCACAATATGCGGGACGTGGAGCTGGCGGCAGTGGCGGTGATGATTCCATGACCGAGGATCGCATTGTCCACATCCTAAGTGAGGCCTCATCGCTGATTAAGAATAATGTGGCAGCTGTCCAGCAACAGCAGCAGCAACAGCACCAGCATCAGGATACGCACAGCAATGAGGATAGCAAATCACCACCACAGAGTTGCAGTTCACCGTTCTTCAAGGTGGAGCAACAGCTGAAGCAACAGCATCACAGTGCTGAGCATAGGGATCAGCGTGATGCTGTGGTGGCGGCTGCACAGCAGCAACAACAGCGAGAACAGCGCGAGCAGAGGGAACAACGTGAGGCGGCTCAGCGGGAGCAGCAGCAACGTTTGCGTCAGGAGGATTTGGCACAGGATAAGATGGCACGTTGGTATCAGGAGCTAATGGCAAGGCCACGTGAGGCAGCATTTCCCAGCTTTCTGCTATCGCCTTTCTTTGGCGGAGCCGCTGGTATGCCCGGTGCGGGCAATGCCTTTCCCGGGGCAAATGCATTCCCCGCGGCCATGGCCGCCGATGAGAATATACGCCATGCCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGTTGCCGGTTTCCCCCTCTCCAGTCTGATGGCCCTGCAGCAGCAAGTGCTAAATGGTGCTCAGGATTTATCACTGGCCGGCAAGGATATCAAATTGAATGGACAACGTGCCTCGTTGGATCACAGTAGCAGCAGCTCCAAAGATGGCGACCGTGACGATAGTTTCCCCTCATTGCATGGCCGTAAATCGGAAGGTGGCGGCGGCGGTGGTGGTGGCAACACTCCCGCTCCACCCGCACCTCCGGTGCTAACAAACGCTTCCAGCGGCGCCAGTGGTAATGCCCCAGCTCCATCCGGGGCCAGCAACTCGGCCGCACCCAGTCCCTTGAGTAATTCCATACTGCCGCCTGCTCTAAGCAGTCAGGGTGAGGAGTTTGCGGCCACCGCCAGTCCCTTGCAGCGTATGGCTTCCATTACCAATTCACTGATCACTCAACCGCCGGTCACGCCGCATCACAGTCAACCCCAAAGACCCACCAAGGCGGTGTTGCCGCCCATTACCCAGCAACAGTTTGATATGTTCAACAATCTCAACACGGAGGACATAGTGCGTCGAGTGAAGGAGGCTCTGTCGCAGTATAGCATCTCGCAGCGTCTGTTTGGCGAGTCGGTCTTGGGCCTGTCGCAGGGTTCCGTCTCCGATTTGCTGGCCAGACCCAAACCCTGGCATATGTTGACCCAAAAGGGACGCGAACCCTTCATACGCATGAAAATGTTTCTGGAGGATGAGAATGCGGTACACAAACTGGTGGCCAGTCAGTATAAGATAGCGCCCGAGAAGCTCATGCGCACGGGCAGCTACAGCGGTAGTCCACAGATCAGTCAGGGATTGGCCAGCAAAATGCAGGCGGCCTCGCTGCCCATGCAGAAGATGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACATGCTGCTCACCTCACCTGGTCTACCGCCCCAGCATGCCATCAGTTTGCCCGCCAATCCGGAACAAGTGCGTGCCAATGCCAATGCCTCGAGCAATGTTTCTTCCGGCGAGGAGAAGAAACCCATGCTGATGCCAGTGCATAGCGGAGCACATCCTGCCAATGCCATGCGTAGCCTACACCAGCATATGTCACCCACCGTCTATGAAATGGCTGCCCTAACACAGGATCTGGATACGCATGATATCACCACCAAAATCAAGGAGGCTCTGTTGGCCAACAATATTGGCCAAAAGATTTTCGGTGAGGCCGTGCTGGGTCTGTCGCAGGGTTCGGTCTCCGAGCTGTTGAGCAAACCCAAACCCTGGCACATGCTGTCCATCAAGGGACGCGAACCCTTCATACGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAACGCCTGCAGCTGCTCAAGAATGAGCGTAGAGAGGCCAGCAAACGTCGACGCAGCACTGGACCCAATCAGCAGGACAACAGCAGTGATACCTCCAGCAATGATACCAATGATTTCTATACCAGCTCCCCGGGACCCGGTTCGGTGGGTTCGTCGGTGGGCGGGGCACCGCCCAGTAAGAAACAGCGTGTTTTGTTCTCCGAGGAGCAGAAGGAGGCCTTGCGTTTGGCCTTTGCCTTGGATCCGTATCCAAATGTGGGCACCATAGAGTTTCTGGCCAATGAATTGAGTCTGGCCACACGCACCATAACCAACTGGTTCCACAATCATCGCATGCGCTTGAAGCAACAGGTGCCGCATGGTCAACCGGGTCAGGATAATCCCATACCCAGTCGTGAGAACACCAATTCCACACCCTTTGATCCCGTCCAGTTTCGTTTGTTGTTGCAGCAGCGTCTGGTAGAGTTGCACAAAGAGCGCATGGGTCTGGGTGGTGCACCCATACCGTATCCACCGTACTTTGCAGCGGCTGCACTACTGGGACGTAGTCTGGCCGGTATACCAGGAGCGGCGGCGGCAGCGGGAGCAGCGGCAGCGGCTGCAGCGGTAGGTGCTGCAGGCGGAGATGAGTTGCAGGCACTGAATCAGGCATTCAAAGAGCAAATGAGTGGATTGGATTTGTCTATGCCCACCTTGAAACGCGAGCGCAGCGATGACTATCAAGATGATATGGATCTGGAGGGTGTGGGGAGTCGTCATATGAGTGACAATGAATCGCTGGAGGGTCCCGAGAATGACACGCAGCCGGACTATGAGAAGGCCTTGCAGAAGTCGGCACTGGCATCGGCAGCGGCCTATATGAGCAATGTGGTGCGTAGTTCGCGTCGTAAGCCAGCTGCACCACAATGGGTAAATCCGGCACAGACCACTCCAGGCGCTGTAAGCGAAGCCGAGCGTATTATCAATGGTGTGTGTGTGATGCAGGCCTCGAACTTTAACAGCGAAGAGGCGGAACAGAAGGCAGACTCGGTGGTTAGCGAAAATGAACCGGAGATAGATCATCGTTTCATGGAGCCAGAGGTGCACATAAAACAGGAGGACGACGACGAGGAGGACGAGCAGCAGGAGAAGACACTAGAGTCGTCGGCAGCGGCGGCGGATATTAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGTGTGCGTCGTTTAAGCAGCAGCAATGGCGCAGGCGGAGCTGTATCCACGGGCGAGTCAGAAGAAGCGCCGGCGGTCGCCTCCTGGAATTACTAG
- Protein Sequence
- MAAAPAASRHLHHPQRQQQQSLQRKLRVVKIIAVGRSNAPTRHTKPSGKLSTVVQRNEKEFGKIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEAHDDEEDDNDQRQQHNETGTDRHAEQDEDEENDEQDMEMSATNNHPNEGNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGAVAAAAAAASEEKTLEAAEEATKNETAEKKAANAEQQQQQQQPPHATLEEQLVNSYWRRGFEGNGSKTPTIYQNSLPPPLPPPPTAAAAATLTTPSNNNNNNSNNLNMDPRPLLCSVNCQLLHQAAAAAAAAHQFDSNSSTSSTSTPNSTAQLAASIANSSKSLLQAAAAAAAEDNNNSLTPNANAAAAAAAMAAHAQHAAALGAPGFLPFQFAAAAAAGQDARAHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGSGGDDSMTEDRIVHILSEASSLIKNNVAAVQQQQQQQHQHQDTHSNEDSKSPPQSCSSPFFKVEQQLKQQHHSAEHRDQRDAVVAAAQQQQQREQREQREQREAAQREQQQRLRQEDLAQDKMARWYQELMARPREAAFPSFLLSPFFGGAAGMPGAGNAFPGANAFPAAMAADENIRHAFXXXXXXXXXXXXXXXXXXXXXXXAVAGFPLSSLMALQQQVLNGAQDLSLAGKDIKLNGQRASLDHSSSSSKDGDRDDSFPSLHGRKSEGGGGGGGGNTPAPPAPPVLTNASSGASGNAPAPSGASNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQISQGLASKMQAASLPMQKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMLLTSPGLPPQHAISLPANPEQVRANANASSNVSSGEEKKPMLMPVHSGAHPANAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNSTPFDPVQFRLLLQQRLVELHKERMGLGGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDMDLEGVGSRHMSDNESLEGPENDTQPDYEKALQKSALASAAAYMSNVVRSSRRKPAAPQWVNPAQTTPGAVSEAERIINGVCVMQASNFNSEEAEQKADSVVSENEPEIDHRFMEPEVHIKQEDDDEEDEQQEKTLESSAAAADIKVINEEKLRLVRVRRLSSSNGAGGAVSTGESEEAPAVASWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00916129;
- 90% Identity
- iTF_00916129;
- 80% Identity
- iTF_00916129;