Lcol002945.1
Basic Information
- Insect
- Lordiphosa collinella
- Gene Symbol
- jarid2b
- Assembly
- GCA_018904265.1
- Location
- JAEIFV010000943.1:114991-117451[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-16 8.8e-13 48.7 0.0 6 68 101 163 96 174 0.88
Sequence Information
- Coding Sequence
- ATGAGGGTGCCACTCCTATATAACACCCCACAGGAGCTGCGTGGTGGTCTCTGTGGTGAGAGTGGCATACAAGGAGTGGCGGTTAAACTGGGACCAATAACAATGAGTTCGCCGCAGTGGCCACCGCCAGTGGAAGACATTGCCCAAGCACGGTATTCGGCCGCAGCAGCTGCTTCGCCGCAGCTGCCTCTTCCAGTCTGCTTTAAGCCCGAATGTCGCATTTCGGATGAGATGAGATTTACGGCCTACAATCAGTATGTACACAAGATGTTGCATCGCTGGGGACCCAGTGCCAAGGAACTGAGCGCCATTAAAAAGTATTTGGCCACCCAGAGCATTGTCATGAATCATCCACCCTGGATAGGTGGCATGGAGGTGGATTTGCCCCGACTATATCACACTGTGCAAGAGCTGGGCGGTCTTAAGGAGGTTATCGAAAAGAAGAATTGGACGGGCGTCGCGGAGGATATGTGCATACCAAACCGAACGGCAAAAACTTTTCATGAGGCCGAGGCGGATTGGGCCAAGGGGGAGGTTCGAGCGCGACGCAATGTAGATCGATTCGTGAACACTGAGAGTGTATCCAATGAGGAGGATGATCTAAGCAGCGATGAGGATGAAGAATCAGAGGAGGTAAATCGACGGTGTGTCCATGGAGGCATTGTCAAGGGACGCAGCATGCCGTTGAGTCAGTTCTATCGCATAGCTCGCAATACCATGGCTTTCTCCGGTTGGGGTTATGGCTTTCCCAGTCCTGGACCCAAGGGCAAAGGCTCAAACTATGCGCGACATCCCTGGAATCTGAAGGTACTCACCATCAATGCCGGTTGGTATCGAGATCCGCACGGTCTGTCCTGGATTGAATATCTGCACACGGGAGCCTCGAAGCTTTGGTATGGCATACCCGATGATCAGAGTGCCAACTTTAGATCGGCACTTACCTCGCTGATACCCATACTTGCCGGAATAAGACCATCTGGCTGCCCTGTGACACGGTTATGCTTGGCCACGGGCTATGTGGTATCGGAAAGCGTCTACTTTACCAACATGTCCTGGCTGGATCTAGTCAAAGATGACTTTAGGGACATCCATGGGGCTGCGAGCCGGCCATGTTCTCGCTGGAGCAACTACTCTTTACCTTGGGCTATGACTAGCGTCCGCTGGCGTTGCATCCACCGAGAAAGTGCAAGCCGAAAAGGGTCAAAAGGCCAAAAACAACAACAGCCACCGCACAAGTCCATCGAAAGTGAATGCGATCTCAGCCGCGCCAATCTATACATATCGATGGTGCGCACCGAGGAGGGCAACATCTACTGTCTGCAGCATGCCTTGAAAAATCTCAACAATGGCAACATTCAGGCCAAGCAATGTAAACTGATTTATGCCTACAATGTGGATGATATACAGCAGCTGATACGGCAACTGCAGGAGAAGATTCAACATAAGGCGGCTGTGAAGAAAAAGTAG
- Protein Sequence
- MRVPLLYNTPQELRGGLCGESGIQGVAVKLGPITMSSPQWPPPVEDIAQARYSAAAAASPQLPLPVCFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKNWTGVAEDMCIPNRTAKTFHEAEADWAKGEVRARRNVDRFVNTESVSNEEDDLSSDEDEESEEVNRRCVHGGIVKGRSMPLSQFYRIARNTMAFSGWGYGFPSPGPKGKGSNYARHPWNLKVLTINAGWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPILAGIRPSGCPVTRLCLATGYVVSESVYFTNMSWLDLVKDDFRDIHGAASRPCSRWSNYSLPWAMTSVRWRCIHRESASRKGSKGQKQQQPPHKSIESECDLSRANLYISMVRTEEGNIYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIQHKAAVKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -