Lclr018021.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- srp
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000061.1:695470-717406[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4 1.1e+04 -3.8 0.4 1 4 425 428 425 432 0.82 2 2 4.5e-19 1.2e-15 56.8 2.7 1 35 498 531 498 532 0.97
Sequence Information
- Coding Sequence
- ATGACCAAGATCAGCAAGCAAAAGGATAAGGAGAAGAGTGTGCCGCCGCCGGCGCGTGTGGGGGGTAGCAATTTGTTAAACAATGCGGCCAATATGAAAATTACCACGGCTAAGGCCAATGCCAAGACACAACAGCAGGCCAAGCAAGGACGTGCCACCGCAGGATCAAATGCGGCAGGCAGCCCAGAAGAGAAGAAAGAGATGGCAATAGCAGCCGAGCCAGAAGCAGCAGCAGCAGCGACGTCATCAGCAACGCCGACGACGGCGACGACGAATTTATCGTCGTCACTTGAGTCCGCCGCGCGCTTGCAGGCTCACACATCAGTTGTCAGCGAAACAGCAAAGCAAACGCATTTTCTGGCTCACTTGCCCTACCACCCGCATACTCATCCGCATACCCATTTGTACGATCACGGCGGCAGCGGCGGCGGCAATACGGATTCCATAATGCGTAACAACTTTGCGCTCTACAGCGTTTACGGGGGTGGGGGCGGAGGAGGCGGTGGCGCCGATCATATGCAACATGTTGTGGCCGTAAATGCTGCAGCGGTGGCAGCTGCAGCGGCTGCAGGAACCCCCAATATCGATGAAGTGATACAGGATACGCTTAAGGATGAATGCTTTGATGATAGCCACAGTACCAGCTTCCACATGCTAACCCCTGTGTCAGATCTGCAAAGTCTGAAAGATTCTAGTGCGGCCATTTCTGTGGGTGGCGATTCACCCTCCCCCTCGCATGCCCTCTCCACAATGCAAAGCCTTACCCACTTGACCAGCGCCGCACATCGGGATAGCTACAGCCTCTCGCCCGAGCATAGTGGCTATTTTACCACACCTCTAAGTCCCGTCTTGCAGCCCAGTTCTGTGTATGCAGGACCTTTGCTCACATCGGCTGCCAATGGCATGCAATATGCTTCTGCCAGTGGAGCTGTTGGTTATGGTGGCGTGGCCAATGGTTCTGGCAGTGGCGCCGAACGTGGTGGCTACGCTCCGCTGGGCAATTACCGCACACATGGCGAAGCCTGGGCTGGACATTATGAGCCAATTAGTTATGCAGCCAATGCTTCCGGGCAGAGTCAAATGATCGGTGGTGGTGTTGGCGGAGCTGGAGTGATACGCAACGGACGGGCCATAAGTGCTGCAAATGCGGCTGCTGCGGTGGCAGCAGCGGATGGTGTGGTCAACAGTGGGGATACTACACGTTTTCTTACCGCTTCGGCATCGCTAACAGCAACATTATTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAGCTACTCATTTAAGGCCACCCCAAATGCCAACAGCTCTGCCAGCTCAGGCGCAGGCGCAACGTCAGCGGCGGCGTCGGCGGCGGCAACGTCGACGGGTACAACAGTGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCCTCCAGACGCGTTGGCCTCTCATGCTCGAATTGCCTGACCACCTACACCTCGTTATGGCGTCGCAATCCCAGCGGTGAGCCCGTGTGCAATGCCTGTGGTCTGTACTTCAAACTTCACAACGTAGCCCGTCCTATGGCCATGAAAAAGGACACCATACAGAAACGCAAACGTAAGCCAAAGGGGACGAAGAGTGAAAAGTCGAAAAAACTGAAAACGGCTTTGATTAAGACAATGGAGAATAATAATTTAGCCTCTTGCCATATGGACAATCAAATGATGAGCGAGGTGAATGAAGGTGAGTCCATTTCCATTTCTGTTATGTTGCATGCCTAA
- Protein Sequence
- MTKISKQKDKEKSVPPPARVGGSNLLNNAANMKITTAKANAKTQQQAKQGRATAGSNAAGSPEEKKEMAIAAEPEAAAAATSSATPTTATTNLSSSLESAARLQAHTSVVSETAKQTHFLAHLPYHPHTHPHTHLYDHGGSGGGNTDSIMRNNFALYSVYGGGGGGGGGADHMQHVVAVNAAAVAAAAAAGTPNIDEVIQDTLKDECFDDSHSTSFHMLTPVSDLQSLKDSSAAISVGGDSPSPSHALSTMQSLTHLTSAAHRDSYSLSPEHSGYFTTPLSPVLQPSSVYAGPLLTSAANGMQYASASGAVGYGGVANGSGSGAERGGYAPLGNYRTHGEAWAGHYEPISYAANASGQSQMIGGGVGGAGVIRNGRAISAANAAAAVAAADGVVNSGDTTRFLTASASLTATLFDADFFTEGRECVNCVAAESGGDFYKSYSFKATPNANSSASSGAGATSAAASAAATSTGTTVLDEHVSRANSRRLSASRRVGLSCSNCLTTYTSLWRRNPSGEPVCNACGLYFKLHNVARPMAMKKDTIQKRKRKPKGTKSEKSKKLKTALIKTMENNNLASCHMDNQMMSEVNEGESISISVMLHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -