Lclr002992.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- grn_2
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000111.1:1-11124[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.81 2.2e+03 -1.6 0.1 23 31 58 66 58 70 0.65 2 2 2e-19 5.4e-16 58.0 6.3 1 35 72 105 72 106 0.97
Sequence Information
- Coding Sequence
- ATGATCAACGCCAGTTTAAGGCCTCGTAGCCATGTGCTGTTGCTGTTGTTGTTGTGGTTGTTGTGTCAGCAACATGAACAACCAGCCAAAGCTGGAGGAGACAAACGTAGGCCCAGAGGAGAGCAAGACTGCTTGGGCTTTGGAGTTTTGGGTTCTCAGTTCTTCTTACGCTGCAGTCCTTGCAAAGTGCGGCCAAAAAGAGCTGGCACATCCTGCGCCAATTGCAAAACCACAACCACAACCCTTTGGCGGCGGAATGCCAGCGGTGAACCAGTATGCAATGCCTGCGGATTGTACTACAAGCTGCATAATGTCAACCGTCCGCTGACCATGAAGAAGGAGGGCATACAGACGCGTAATCGCAAACTCAGCTCCAAGTCCAAAAAGAAGAAGGGTCTGGGTGGCGGTTGTCTGCCCATTGGCGGTCATCTGGGTATGGGTGATTTCAAACCGCTGGATCCGTCCAAGGGCTTTGGTGGCGGTTTCTCGGCCTCGATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCATATGCATGGCAGTTGGTATACCGGCGGCATGGGGGCATTGGGTGCGTCAAGTGGTCTGCAGGGAGGCTTCTCAACGGCCGGCTCACTGAGTGGAGCTGTGGTGCCACACTCGCAGCCCTATCATCTGGGTCTCGGATCTATG
- Protein Sequence
- MINASLRPRSHVLLLLLLWLLCQQHEQPAKAGGDKRRPRGEQDCLGFGVLGSQFFLRCSPCKVRPKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLSGAVVPHSQPYHLGLGSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972723; iTF_01400025; iTF_01399131; iTF_01486812;
- 90% Identity
- -
- 80% Identity
- -