Lclr018018.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- pnr
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000061.1:576210-587687[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-18 1e-14 53.9 3.2 1 34 169 201 169 203 0.97 2 2 3.2e-19 8.9e-16 57.3 6.7 1 35 226 259 226 260 0.98
Sequence Information
- Coding Sequence
- ATGGGCATTTTACTAAGTGATGGCGATTCCACCTCGGATCAGCAGTCGACGCGAGACTATCCGCAGTCCAGCGGCGAATATCAGAACGTGCAACTGCAGGTTGCCGCGGCTGCCGCTGCTGCCAGCTCCAAGATGTATCATTCAAGTGCCGTGGCAGCCGCCGCTTATACAGATCTTGCGGCAGCGGGCAGTGCAGCCGGCGCTGGAGTGGGAGTTGGTGTGGGTGTTTCGGGCTATCATCATCAGCAGGCCGTAAATGCACCGGTCTATGTGCCCTCCAATCGTCAGTATAACCATGTGGCCGCGCATTTTGGTAGTGCCGCGCAGAATGCCTGGACCACGGATAGCTTTGGCTCTGCACATGCCCAACTGCCGGCGCAGTTCTACACACAAAATGCGGCCGTCATGATGGGCTCTTGGCGCAGTGCCTACGATCCGACGGGATTTCAACGCTCCTCGCCCTATGAGAGCGCCATGGACTTTCAGTTTGGTGAGGGACGCGAATGCGTCAATTGCGGTGCCATTTCCACTCCGCTCTGGCGACGCGATGGCACCGGACACTATCTGTGCAATGCCTGCGGTCTGTATCACAAGATGAATGGAATGAATCGGCCGCTGATTAAGCCCAGCAAGCGCCTGGTGAGTGCAACAGCCACACGTCGCATGGGCTTGATGTGTACCAATTGCGGTACACGCACTACCACACTCTGGAGACGAAATAACGATGGTGAACCCGTGTGCAATGCCTGTGGTTTGTACTACAAACTGCATGGAGTGAATCGTCCGCTGGCCATGCGCAAGGATGGCATTCAGACCAGAAAACGAAAGCCCAAGAAAGCGGGCAGTGGTGGCGGTGGGGGAGCATCAGCGGGAAGCAGTTCGAGTGCAGCTCTTGAGGCCATCAAGGAGTGCAAGGAGGAGCATGATCTCAAGCCCTCGCTTAGCCATGGTCTTAGCAAGCTTCACACAGATCTTAAGAGTAGCCTGGCAAGCAGCTCAATGGCCAGCACGGCTGCTGCCGCTTCGGGAAGTTCACATGGTCATCACGGTGTGGGGGTTCATCATCATTTGCATGCAGCAGCCGCAGCAGCAGCCTACGGGGTGAAGACAGAGACAAATGCCACCAACTATGACTATGTGAACAATTGCTATTTTGGTGCCTCGTTTGGGGCATTGGGTGGTGCAGCCGCCGCCTCGTCGGCTGCCATGGCAGGTGGAGCCGCTAGCGAATTGGCTGGCTATCATCATCAGCATAATGTCATCCAAGCAGCCAAATTGATGGCCACTTCTTAG
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPQSSGEYQNVQLQVAAAAAAASSKMYHSSAVAAAAYTDLAAAGSAAGAGVGVGVGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMGSWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLMCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKAGSGGGGGASAGSSSSAALEAIKECKEEHDLKPSLSHGLSKLHTDLKSSLASSSMASTAAAASGSSHGHHGVGVHHHLHAAAAAAAYGVKTETNATNYDYVNNCYFGASFGALGGAAAASSAAMAGGAASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00916845;
- 90% Identity
- iTF_00920325;
- 80% Identity
- -