Lclr001162.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- lov
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000141.1:777315-795258[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-19 1.9e-15 56.4 0.0 1 44 752 795 752 796 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAGGACGTTGAGGAGGAGTTGATTAAACGCCGCAAACTGACGTCGCTTCAGATGAACGACTACGGCCACCAGGTGGCTTCACAGTCGCTGCCCTTGCCGTTGCCGTTGCTGGCCAAGACGGCGACGGTCAGTGATCATGCCGCCTCCATGCACACTACGCCGCCCACCACACCGCCCACGCCGCCACCCATGCCCTTAAACATGACGGCCTCCAGCACGCACAGTCCACCTGCCACGCCCACAGCTGCCGCAGCGCCTCCTGCCCCCCAGGATCATTACAGCCTGCGTTGGAACAATCATCAGAATCACATACTACGAGCTTTCGATGCTTTACTGCAGACCAAAACCCTGGTGGACGTCACCCTGGTGTGCGCCGAGACCTCGATCCGCGCCCACAAAATGGTTCTCTCCGCCTGTTCGCCCTTCTTTCAGCGTGTGTTTGCCGAAACTCCGTGCAAGCATCCGGTTATTGTGCTCAAGGACTTCCGTGGCTGGGTGGTGCAGGCCATCGTGGATTTTATGTACCGCGGGGAGATCAGTGTGCCACAACAGCGCTTGCAGACCCTGATACAGGCTGGCGAGTCGCTGCAAGTGCGCGGATTGGTGGAGAGCTCAGTGCCGGAGCATACTCCCACCCCGGCGGCCTCTCCCGATGATTTCGGTCTTATCGATGCTTCGCTCATGTCGTCCAGTTTCGAGGACGAGTCGCCCTCCATGGTGCGGCCAGCCAGTGGGAAGCTGATTATGCCCTCCAGACTGTTTGGTAATCCAGCCAGTGCCATGGCTGCTCTGAGTTTGCGGAGAAAGCGCGAGCAGGAGTGCAGCGAGCGTGAGCTGGAGAGTGACCAGGAGTTGGGTGGCAGCTCACCCATGCCGCGACGCAAGCAGGCGCGTCCGAGAAGACGTTCCGGTGAGGTACCCCATGACTTTGGCTTGAGCAAACCCGAAACGGAAACGCTGCAAACTGTGATCAAGCATGAGCTAATGGAGCGCATGGACAGAGAAACGGAGGAGCCGGATCAGGAGGAGGAGGCCCAAGGTCAGGCTAAGAAGGACAAACAGGAAGAGGAGGAGAAGGCCAGCCCAGAGGAGGAGGTGGGGGGCCAGCCACCACAACATACGCAACAAGAGCTTGACGAAGACGAGGAGGAGGAAGAGGTTGAAGAGGACCCTGACGAAGAGGAGCAGGATATTGAAGAGCTTATACACACCACCAATGAGTTGAGACGCCAGGCGGCAGTGGCGGCAGCCAATGCGGCCGCCATGTCGCCTTCCCCCTGCTCACCCTGTCCCAGCGATGGGCCAGAGGATCTGTGTACCACCAAGAAGGATAAGGATGGCAACACCCACTCCTCGGACAGCGAGAGCAACAACAACAACAACAATAACAACAGCAGTAAACTCCAGGACAACAATCAACGCATCATGTTATCCCTGAAGGACATACGACAATTGAATGCCAAGCCGAATGCCTCATCCACTCCCAATCATCACACACCCACCAGTTGCTCCGGAGGCGGGGGCAATGGTAATGGCCTGCTTAGTTTCCCCCCACCCGGCATGGGACGTCCGCCAGGACTACCCGATAGTCCACCCAACTGCCACATGGAAGCTTTGGAGGCGCAAATGCATGCTGCAGCTGCCGCTGCTGTGGCTGCTGCCGGTGAGCATTCATTCCATCATATGGAGCATCAAATGGAAATGTCCCTGGCCGCGGCAGCGGCGGCTGCTGTCATGCGTGACCCACGCGATCAAAGGGAACACAACGCTTATGCCAATAATCTGCTGGGACCCATGGGAATGCCTCCCTTCGGACCTGGACCGGGACCCAACGGCGGAGGCGGCGGATCCACAGGTGGCAACGCAGGACCCACGCCCCATGAACGCCTCGAGGACAGCATGAATCGCCTGAGCAAAGAGTTTGTCAAGGAATTCGGACCCACATCGCCAATGAGTCTGCCCGGACACTTCAATCCGCCACCGGATGGCCCACCACATCCGCCATCACCGCTGCCCTTTCCCGGTATGTCCTCGGCGTTGACGCTAACGCCGCCACACATGTTTGGCCTGGACTCACCTCTGGGACTGTTTCCACCGGGCATCGATCCTGGCAAACTCTACAATCCTCTCATGGAAATGAGCGATCCGCGCGATATGCCAGGAGGTCCGCCGCCGTTTCTTAAAAAGAAAATGCCCCGCCCCAAGGGACAACATTCGGCGCCACGTGGTGGTCCGCCCCGCTCCTGGACCAATACCGAACTAACGGAGGCCCTGCAGCATGTGTGGAACAAAAAGATGACCACATCGCAGGCCTCTCGCATCTTTGGCATTCCCTACAATTCGCTGCTGATGTATGTGCGTGGAAAATATGGCAAGAGTCTTAAGCTGGAGCAGTTGCGCAAGGATTGCATCAGTGGACCTCCCATAGAGATGCTTCAGATGGGCATAAGTGGCGGGAATGGCGGCAGCGGTGGTGGCAGTGGCTCCAGCAAGGGAGAGAAGAACAAAGAGCGTAAGGAAAAGGACAAGGACAAGGGTTCAGGCGGTGGTGGCTCCCATAATAGCTCGGGAGGCTCCAATAATACGGGTCCTTCGGGTGGCTCAGCTGGAAATGGCCAACATATGCCACATCCCAGTGAGCTGGGTCCCTTGGGACCTTTGGACTTGGAGCTGGGACTCCCCTTGGGTCCACCTGGAGGACCCAGAAGTGGTAGCTCCGAGCCTGATATGCTGGGAGGACCCAATCCCCTGTTCAACCCCTTCAATCCTCAAGGCTTCTATCCTGATTTTGCGGGTGGATTTCCTGGCCTACCGCTGAGCATGTTAAATCTGTTGCCGCCCTCCGAACGACATCATGCAGCAGCGGCCATGCATCATTTGGGCATGACCATGGATGAGGACTGCAAGTCGGTGGGCTCCAAGCAATCCTCCTCGCTGGATGATGACTTCGCTGCACCCCCCGGCTTGCCACCACACTCACGAGAGAGTGGTCCACCGCTGGCGCAGGCGAATGGTGGCGGGGCTGGGCAGGATTGA
- Protein Sequence
- MLKDVEEELIKRRKLTSLQMNDYGHQVASQSLPLPLPLLAKTATVSDHAASMHTTPPTTPPTPPPMPLNMTASSTHSPPATPTAAAAPPAPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGLIDASLMSSSFEDESPSMVRPASGKLIMPSRLFGNPASAMAALSLRRKREQECSERELESDQELGGSSPMPRRKQARPRRRSGEVPHDFGLSKPETETLQTVIKHELMERMDRETEEPDQEEEAQGQAKKDKQEEEEKASPEEEVGGQPPQHTQQELDEDEEEEEVEEDPDEEEQDIEELIHTTNELRRQAAVAAANAAAMSPSPCSPCPSDGPEDLCTTKKDKDGNTHSSDSESNNNNNNNNSSKLQDNNQRIMLSLKDIRQLNAKPNASSTPNHHTPTSCSGGGGNGNGLLSFPPPGMGRPPGLPDSPPNCHMEALEAQMHAAAAAAVAAAGEHSFHHMEHQMEMSLAAAAAAAVMRDPRDQREHNAYANNLLGPMGMPPFGPGPGPNGGGGGSTGGNAGPTPHERLEDSMNRLSKEFVKEFGPTSPMSLPGHFNPPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGNGGSGGGSGSSKGEKNKERKEKDKDKGSGGGGSHNSSGGSNNTGPSGGSAGNGQHMPHPSELGPLGPLDLELGLPLGPPGGPRSGSSEPDMLGGPNPLFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPSERHHAAAAMHHLGMTMDEDCKSVGSKQSSSLDDDFAAPPGLPPHSRESGPPLAQANGGGAGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00918974;
- 90% Identity
- iTF_00918974;
- 80% Identity
- iTF_00915432;