Lclr004258.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lordiphosa clarofinis
Gene Symbol
lz
Assembly
GCA_018904275.1
Location
JAEIGQ010000134.1:584675-628183[-]

Transcription Factor Domain

TF Family
Runt
Domain
Runt domain
PFAM
PF00853
TF Group
Beta-Scaffold Factors
Description
The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-48 9.8e-45 151.4 0.0 5 94 178 267 174 273 0.95
2 2 6.7e-18 2.6e-14 53.0 0.2 91 129 346 384 342 384 0.96

Sequence Information

Coding Sequence
ATGCATTTCTTGCCCAGCGAAGCGGCAGCCACAGCAGCGACTCTTAATACGGGCACCAGCGCAGCCACCGCCACCGCCTCCTCCTCCTCCTCCTCCTCTTCCATTTCAATCTCCGTTCCCGGCTCCGCAGCTGTGGCGCCTGTCAGCATTGCCGGCCGCCTGGCGCGCAGCATTACCAGCAGCAGCGTCGGCGTCCATCATCATCATCATCAATTCTATCATCATCATCATCCAGCCAGCATGGTCACATCATCGACCTCGCCAACGGGTACAACGGGCTGGACAAACACTGGCGACTATAAAGGTTCCACCGCAGCCACCACAGCCTCGGGGGCTGTCTCCTCGGTGATGTGTGAAGTCCTGCCCTCGAGTAGTGCCAGTGTGGGCAGCAGTTCACCAACAGGTGGGGCGAGTAATGGCACAGCCAATAGTGGACATAGTGGAGGAGGGAACAGTAGCTCCAACAACAACAACAACAACAATGCGGTGCATCAGGATCTGCTGTGGATGGAAAGATTTGTGCTGGAACGACAACAGGAATATCCAAACGAATTGGTGCGCACGAGCAATCCGTATTTCCTGTGCTCCGCCCTGCCCTCCCATTGGCGTTCGAATAAGACGCTGCCGGTGGCCTTCAAGGTTGTGGCCCTGGCGGATGTGGGCGATGGCACCTATGTGACCATACGGGCGGGCAACGATGAGAATTGTTGCGCCGAATTGCGCAATTGTACGGCCCAGATGAAGAACGGCGTGGCCAAATTCAATGATCTCCGGTTTGTGGGACGCAGCGGGAGAGCAGGCGGAAGCACTTTGATTGAGGGACATGAGGATCGTCACATTAGGCGCTGGCCTCCGGCCAACATGCAACATGCGGCTGCCTCAAACATCCTTTGCATATACCAAGCCGGCGTCACGCAAGGCTTAGGCTTGGGCATAATCGATTTGAACCCACAAATTAATGTGGAATTGGCCAGCAGAACCAGCAGCAGGGCCGAGCCAGCAGAAGCAGGCAGGGGGCTGCTGCTGCCAATTCTAGGCAGCAGGAAAAGCTTTACGCTCACCATAACAGTTGCAACGAGTCCACCGCAGGTGGCTACCTATGCCAAAGCCATCAAAGTCACCGTCGACGGTCCCCGAGAGCCACGCTCCAAGACAAGTCCCACCGGTGGCCCGCACTACCGTGCCCTCGGTTTGGGCACTCGCCCGTTCATCGATGGCTTTCCCAAAACCTTTCACGAGCTGGAAACGTTACGACGCTCGGCCAAAGTGGCGGCCACCACAGCAGCCGCTGCTGCGGCCTCTGCCGTGACCGCCGTTGCCGCCGTCGCCTCAACCACAAGCGGGAGCAGTGCCAGCGCCAGTGCCAGCATTGTGCAGCAATTAAGCAGCAATTACTCATCGTCGAATAGTACAATAAATTCTGATTGCCAGGGCTACAAGCCGAATGCACCACAGATTCAAGAAACGGATCTGATAGGAGCCGCCGAATGGACGGGCTCCACCAGCACTGGCCCCAATGTGGCCTACACGGTGGGCGTGGGTGTTCCCTATCCCCATCATCCACATGTCCATCACCTGCAACATCAGATGGCCTTGCCGCCACCGCCCCAGCCGCCGGCGGCTGCTCCTGTGCCCGTGGGCAATGCCAGCGGCATGGCCATGGGCATGAATCATCATTACGGCAGCTCCATGGGTGGCTATGAGACCGGCTACGAGACGAATCATCTGCCCACTGTGCTGCCCGAAATGCACGGCCATGGCTTTGGCACCGATCCGTACCAAACGGCCGCGGTGGGCGGCTATGGAACTGGCGGCTCCAAGTCCGAACTGGAGACCCTCAATGCCGGTGGCTATGGCTCGGCCGGTGGCTACAATCAGGCCGCCTGGTCGAATGGCTACAACAACTATCAGTATGGCCAGTGCTCCGCCTCGGCTCAGTATGGTGCAACTGCCGCCGCGGCAGCGCCCACCCATCCGCCCATGGTCCTCTATCCCCATGTCTACTCCACCGTCAATCAGAATCAGATTCATCTGCACTTGCACAGCACCGAGAAGTTGGAGCAGTATCTGGGCGCCACGGATCATCAGCAGCTGACGATTAGCTCGTTAACGGGCAACAGATCCAGCATAGAAATCGGCCTGGCGGCTGGCGCAGGCGGTGGCGTGGATAGCCAGCAGTCGTCGGAGGCCACAAACCAAATATATCACCAGGAGGTGCAGCAGCAGCAACAGCAGGAGGTGGGCGATGCACCGCGCGGGGAAGAGGATGTGGGCGATCTGACGCCGGTGTGGCGACCCTATTGA
Protein Sequence
MHFLPSEAAATAATLNTGTSAATATASSSSSSSSISISVPGSAAVAPVSIAGRLARSITSSSVGVHHHHHQFYHHHHPASMVTSSTSPTGTTGWTNTGDYKGSTAATTASGAVSSVMCEVLPSSSASVGSSSPTGGASNGTANSGHSGGGNSSSNNNNNNNAVHQDLLWMERFVLERQQEYPNELVRTSNPYFLCSALPSHWRSNKTLPVAFKVVALADVGDGTYVTIRAGNDENCCAELRNCTAQMKNGVAKFNDLRFVGRSGRAGGSTLIEGHEDRHIRRWPPANMQHAAASNILCIYQAGVTQGLGLGIIDLNPQINVELASRTSSRAEPAEAGRGLLLPILGSRKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGPHYRALGLGTRPFIDGFPKTFHELETLRRSAKVAATTAAAAAASAVTAVAAVASTTSGSSASASASIVQQLSSNYSSSNSTINSDCQGYKPNAPQIQETDLIGAAEWTGSTSTGPNVAYTVGVGVPYPHHPHVHHLQHQMALPPPPQPPAAAPVPVGNASGMAMGMNHHYGSSMGGYETGYETNHLPTVLPEMHGHGFGTDPYQTAAVGGYGTGGSKSELETLNAGGYGSAGGYNQAAWSNGYNNYQYGQCSASAQYGATAAAAAPTHPPMVLYPHVYSTVNQNQIHLHLHSTEKLEQYLGATDHQQLTISSLTGNRSSIEIGLAAGAGGGVDSQQSSEATNQIYHQEVQQQQQQEVGDAPRGEEDVGDLTPVWRPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00914277;
90% Identity
-
80% Identity
-