Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010002828.1:371286-378296[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00028 0.018 15.8 2.1 1 23 172 195 172 195 0.96

2 13 0.0019 0.12 13.2 2.9 2 23 244 266 240 266 0.89

3 13 0.0099 0.62 10.9 0.8 1 23 363 386 363 386 0.93

4 13 0.031 2 9.3 3.8 2 23 435 457 434 457 0.95

5 13 0.0018 0.12 13.2 0.6 1 23 520 543 520 543 0.88

6 13 9 5.6e+02 1.6 0.1 2 14 562 574 561 586 0.83

7 13 0.00029 0.018 15.7 1.6 2 23 594 616 594 616 0.96

8 13 0.00027 0.017 15.8 0.1 1 23 691 714 691 714 0.95

9 13 0.00095 0.06 14.1 0.2 1 23 764 787 764 787 0.93

10 13 0.0015 0.095 13.4 2.2 2 23 837 859 836 859 0.97

11 13 0.0043 0.27 12.0 3.8 1 23 946 968 946 969 0.94

12 13 0.18 11 6.9 1.5 1 21 1021 1041 1021 1042 0.95

13 13 1.1 69 4.4 0.2 2 14 1085 1097 1084 1109 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00028	0.018	15.8	2.1	1	23	172	195	172	195	0.96
2	13	0.0019	0.12	13.2	2.9	2	23	244	266	240	266	0.89
3	13	0.0099	0.62	10.9	0.8	1	23	363	386	363	386	0.93
4	13	0.031	2	9.3	3.8	2	23	435	457	434	457	0.95
5	13	0.0018	0.12	13.2	0.6	1	23	520	543	520	543	0.88
6	13	9	5.6e+02	1.6	0.1	2	14	562	574	561	586	0.83
7	13	0.00029	0.018	15.7	1.6	2	23	594	616	594	616	0.96
8	13	0.00027	0.017	15.8	0.1	1	23	691	714	691	714	0.95
9	13	0.00095	0.06	14.1	0.2	1	23	764	787	764	787	0.93
10	13	0.0015	0.095	13.4	2.2	2	23	837	859	836	859	0.97
11	13	0.0043	0.27	12.0	3.8	1	23	946	968	946	969	0.94
12	13	0.18	11	6.9	1.5	1	21	1021	1041	1021	1042	0.95
13	13	1.1	69	4.4	0.2	2	14	1085	1097	1084	1109	0.73

Sequence Information

Coding Sequence: ATGGAAGGCATGGACCTGTGGACGTCAATGTTCTCCAATGATTTCGAGGAGGGTGAGCAAACCGAGCAGTATGGCAATGGTACGGGCGCGGGTGGCGCTGAAATTGAACCTGCAGCCGATACAGATACAGACGACATTATGGCCGAGGATGAAGCGGGGGACGACGAAGAGGAAGATGATGACGATTTGATGGAGGAGGCAGGTGATGATAGCGATGAGAATGGCAAAAATGGCCAGTCCAAGGAACCTGATCCGGACGATGATgccatatttgattttgaattggaGCCCATTGTAAGCATTGCTGAACCACCAATGCCGCCTTTAAAGCCGGCTGGTCCCACTCCAGTGGCTGTGCGTCCACTGCAGCGTCAATCGCTGCCCGCTGTGGGCTCCATGCCAAGTCGGTCCAAGGAGATGCGTTTGTCTGGTGTAACCATGCGTCCCACCACCTCACAGATCAATGCCACTGATTCCAATGGGGTGCCCATTAATTATGAACTGGGCGTCATCTATATATGCCCCGCCTGTGGTTCAGAGTTCCGGCAGCAGGATCACTGGAAACGACACATGAATCACATGCATCAGTTCAATACACGTCGTGGTCTCAATTTTGTGGCCATGGATAAGCTGTATCAACGGTGCTTGGAGTGCAACAAACGCATTGCCATGCACAGCCGTGAGAATCTGCTGAAGCATAAGTTCACCCACTTGCCATATCGTTGCACCAAGTGTTACATCTGCAAACGGGAGTACAAGTATAGGCAAGATCTGATGGTTCATCTGCGTATGGTGCACTGTGACGAGGTTTTGGCCATGATGCAGGATGGCTACTCAGCAGCGGGACGCAAGACACGTGTACGTGAGCCGCGCACTGAGCAAATGCAACACAAGGAGCTCTATCCGGATGATGATCTTGACATTGTGGTCAGAAATGAAGTACTCGAACCCGATTTAGATGAGTCCAGCTATCTACCCACGTATGGTGAGGCAGACATTACGAAAATTTCGtcaaaaagcaagaaaaaacAATCATTGGCAGCAACTGGAAATGGTGCAGCGGATCTATGTGAAGATTATATACACTACATGTGTCCAGACTGTGGCACCGAATGCGATACACACGCCCAATGGAGCCAACATATTGAGTTTGTGCACGACTATGTGAGTCGGCGGGGATTGAATTTTAGAAGCGTTGACATGCAGATGCAGTGCCTCGAATGCAAGAAGATTGTCACCCCCAACACCATCAAGACACTGCGTGCCCACAAATTTAGTCATCTGCCACAGCCCGAATGGTTGCGTTGCAAGCTCTGCTACAAGGGTTTTACCGAGCATCATGAGTTGGTCACTCACCTGCTGAAGCAACACAATCTGGAGACCCTGATGCCAGCAGCCGCCGAAACAGAGCCAGAGTCGGGCCAGAGTGCTGGGGATGATGAGGGGCCCGGCGGCAATGGCAATGATTTGTATGACGATGACGCTCAGTGGAATGATGAGGCACCACGACGTGGCGGTCGCATTGGTACCGATGATATGTACGAGCCGCACATTGATTACCTCTGTCCGCAGTGCGGCAAGGAGTTCATCGAGAAGAAACACTGGCGCACTCATGTGGTACAGGTGCACGGCATGAACGACATTGCCAAGCTGAACTTTGAGCTGATCAATGAGCGTCAACTGAAGTGCACGGAGTGCGAGAAGATCATCACGAACGCCTATGGTATACAGAATGCCCAACAGCATCGGATTACCCATTTGCCCTTCAAAGCGTATGCCAGATGTCGCAAGTGCAACAAATCGTATACGGATCGCAAGGGTCTGGTCAAGCATTTGGCCACCTATCATCGTGTGGGCTATGATTTGCAGAAGAGGAGCGCACCTCCGCCGCCTGCCAAGCAGCCGCCGCGGAAGCAAGTCGTTACGGTGGCCAATGAAACGTATGAGATTATCTATTTGGATGACGAGCAGGCCAACAGCATTGAGGAGAACGATTTTGGTGAGCAAATGCAGGCCGATGAGGATGATTATCCGGTTACACCCACTGGCCCGCCACCCAATGCCAATCGCTACAAGTGTGTCGATTGTGGCAATCAGTTTGCCACACAGGCAGCTCTCAAGATGCACATCAGCGAGGAGCATGACTTTATGGATTCCCCATTCAGTGCCAAGTTGCTCAAGGCCGAGTCCACTGAGGAAATGAAGAAGACCGCCTCGTCGACACCCTCCACGCCGGCCGGCGCCAACGCACGCCCCCCTTCGGGAGCCACCATCGAGCAGAGCTATATATTCCTTTGCCCCTCCTGCGGCCAGGAGTACAAGACGCAGTTTGAGTGGCGTCGCCACATCAACGAGGCCCACAACTTTGACAAGCGCCAGTACTTGAATATGCGGCAGCTGGACAAGTATCGCTATCAGTGCACTCAATGCAAGGATGTGGTGTCCAATTCCAAGCTCAAAGGGCTGCAGGATCATCATTTCCGGCATCTGCCTTATCGTCTGTATCTCAAGTGTTTGGTCTGTGGCACCTGTTATAACCACAAGCCGAACATTGCCGCACATCTGAGGACGCGGCATAACATTTTTGAGCGGGAGACGCCGTGGCGGGAACAGCCGAATAAACCGCAATACTCGTATGTTCAGTCCAAGGACAGGGAGAAGGATAAGGAGGCGGATCAGTCGCCTATGGGTGGTGCCTCATCCTCGACCACTGCCTTGGTCACCAGCCGCATGCTTAAGCCCCAAACCGGCAGCCTGCCCACACGACCAGCCGGCCTCAATACGCTGGAGGATAGCATTTCATATCACAATGCCGTCGATCTGGACTTCATCACCTACTATTGCCCCAAGTGCAATAAGAACTTTGATTCCCATGCCTTCTGGCGCAAGCACATTGTGGAGCACCACAACTACAACAGTCGGGAGGGTCTGAATTTCCGGCAGATCGATAACCATCACTACTTGTGCCTGGAGTGCTATAAGCGTGTCACGGTGACCCACACCAAGGGTGCCATTGGTCAGCTGCAGTCGCACAAGTTCCGGCACCTGCCCTATCGCTCCTTCAAGTGTTTGACCTGCAGCGGGGAATTTGTGCGCAAGCAGATGTTCTTCAAGCACTTGAACCGAGATACAAATCGTTGCGATAACCGGCCCAGTGGTGAGCcacaggagcaggaggatcAAGAGCCGCAGGGCTCGGCCGAAGTGACCGCCGTGGATGATGAAGAAGTAGATCCCTCGGCCTACCGTTTGACCTGCCCGCAGTGTGGCGATCATTTCACCACCAGCAGCAAGGCGGTGTGGCGGGAGCACATTAACATCTACCATGGACTGGGCAAGAAGGAGCTGTTGCACATGCGCAAAGTGGGCGACGATCTGTATCGTTGCTATGACTGCGATGAGCAGCTGCAGACCAAGAAGCTGCGTGTACTGCAGCAGCATCGATTCCGACATCTGCCCTATGCCGCCTACATACGCTGCCAGCTGTGCGAGAATCAGGACGAGGATGGACTGGGACATGGAGCTGCTGCAGCCGGACTGCACAGCATGCGAGAGCTACAGCAGCATATACGTGAACAGCATCCCACCGTGGAGGAAAGTGATGAGCAAATGCAAAAGGTGCGACAGCAAGCCGATCAGGAAGACGCCGACGAGGATAGCCAGCCAGCGGCCCCAGACGGTCCCTACATGCCGCTGCCGCCACATTTGTTGGATGAGGAAGATTTTGAGGAACAATATTTATTGGGCTAG
Protein Sequence: MEGMDLWTSMFSNDFEEGEQTEQYGNGTGAGGAEIEPAADTDTDDIMAEDEAGDDEEEDDDDLMEEAGDDSDENGKNGQSKEPDPDDDAIFDFELEPIVSIAEPPMPPLKPAGPTPVAVRPLQRQSLPAVGSMPSRSKEMRLSGVTMRPTTSQINATDSNGVPINYELGVIYICPACGSEFRQQDHWKRHMNHMHQFNTRRGLNFVAMDKLYQRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVLAMMQDGYSAAGRKTRVREPRTEQMQHKELYPDDDLDIVVRNEVLEPDLDESSYLPTYGEADITKISSKSKKKQSLAATGNGAADLCEDYIHYMCPDCGTECDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVTPNTIKTLRAHKFSHLPQPEWLRCKLCYKGFTEHHELVTHLLKQHNLETLMPAAAETEPESGQSAGDDEGPGGNGNDLYDDDAQWNDEAPRRGGRIGTDDMYEPHIDYLCPQCGKEFIEKKHWRTHVVQVHGMNDIAKLNFELINERQLKCTECEKIITNAYGIQNAQQHRITHLPFKAYARCRKCNKSYTDRKGLVKHLATYHRVGYDLQKRSAPPPPAKQPPRKQVVTVANETYEIIYLDDEQANSIEENDFGEQMQADEDDYPVTPTGPPPNANRYKCVDCGNQFATQAALKMHISEEHDFMDSPFSAKLLKAESTEEMKKTASSTPSTPAGANARPPSGATIEQSYIFLCPSCGQEYKTQFEWRRHINEAHNFDKRQYLNMRQLDKYRYQCTQCKDVVSNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIFERETPWREQPNKPQYSYVQSKDREKDKEADQSPMGGASSSTTALVTSRMLKPQTGSLPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEHHNYNSREGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCSGEFVRKQMFFKHLNRDTNRCDNRPSGEPQEQEDQEPQGSAEVTAVDDEEVDPSAYRLTCPQCGDHFTTSSKAVWREHINIYHGLGKKELLHMRKVGDDLYRCYDCDEQLQTKKLRVLQQHRFRHLPYAAYIRCQLCENQDEDGLGHGAAAAGLHSMRELQQHIREQHPTVEESDEQMQKVRQQADQEDADEDSQPAAPDGPYMPLPPHLLDEEDFEEQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00916678;
90% Identity: iTF_00916678;
80% Identity: -