Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010000672.1:218259-222765[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00012 0.0077 16.9 0.7 1 23 138 160 138 160 0.97

2 14 6e-05 0.0038 17.9 1.6 1 23 340 362 340 362 0.98

3 14 0.95 59 4.7 2.7 1 23 368 391 368 392 0.92

4 14 1.1 68 4.5 0.6 1 23 407 430 407 430 0.94

5 14 0.0014 0.09 13.5 1.9 3 23 687 707 686 707 0.92

6 14 0.057 3.6 8.5 1.4 1 23 713 736 713 736 0.98

7 14 1.9 1.2e+02 3.7 1.5 2 23 773 794 772 795 0.92

8 14 0.0064 0.4 11.5 1.9 1 23 816 839 816 839 0.97

9 14 0.0011 0.07 13.9 0.2 1 23 1017 1040 1017 1040 0.94

10 14 0.0039 0.25 12.1 5.7 1 23 1052 1074 1052 1074 0.98

11 14 0.00028 0.017 15.8 0.9 1 23 1079 1102 1079 1102 0.95

12 14 0.0061 0.38 11.6 3.1 1 23 1108 1133 1108 1133 0.95

13 14 1.1e-05 0.0007 20.2 0.4 1 23 1138 1160 1138 1160 0.97

14 14 0.43 27 5.7 2.4 1 23 1166 1189 1166 1189 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00012	0.0077	16.9	0.7	1	23	138	160	138	160	0.97
2	14	6e-05	0.0038	17.9	1.6	1	23	340	362	340	362	0.98
3	14	0.95	59	4.7	2.7	1	23	368	391	368	392	0.92
4	14	1.1	68	4.5	0.6	1	23	407	430	407	430	0.94
5	14	0.0014	0.09	13.5	1.9	3	23	687	707	686	707	0.92
6	14	0.057	3.6	8.5	1.4	1	23	713	736	713	736	0.98
7	14	1.9	1.2e+02	3.7	1.5	2	23	773	794	772	795	0.92
8	14	0.0064	0.4	11.5	1.9	1	23	816	839	816	839	0.97
9	14	0.0011	0.07	13.9	0.2	1	23	1017	1040	1017	1040	0.94
10	14	0.0039	0.25	12.1	5.7	1	23	1052	1074	1052	1074	0.98
11	14	0.00028	0.017	15.8	0.9	1	23	1079	1102	1079	1102	0.95
12	14	0.0061	0.38	11.6	3.1	1	23	1108	1133	1108	1133	0.95
13	14	1.1e-05	0.0007	20.2	0.4	1	23	1138	1160	1138	1160	0.97
14	14	0.43	27	5.7	2.4	1	23	1166	1189	1166	1189	0.92

Sequence Information

Coding Sequence: atgccagcaacaacaactagcaAACGGCTGATTACCGAAAAGGAGCAGCAGCCTCTCCATTCCAAATCTGTTTGTCGCTGTTGTCTAAGATCTGAGGCGGAATTTCTGAGGCTAGATACTCAGTTGGTGGCGCGCAATCTGGATGcgaccagcaacagcagtggAGCATTGGATCAAATACCCCTCTTAAGTTGCTTGCTCTTCTGCATACGCACGGATAGAAACCCAGAGCTGTCGCCGTACATCTGCAAGGAGTGCAGCAAGAGCTTGCTGATAGCCTACTATTTTCTGCAAAACGCTCTGCGTGCCCATGAGATACTGTGTCGCCAACTGACTAAGGGCAAGCCCGCGCGAGCAAATGGACACATTCAGCAAGGGcaggATGACAAATCGAAGTCGCCGACCGTGCGACACGAATGCAAAATATGTGGCCAGGTTATTAACAATCGAATGGAGCTGAAGCAGCACATACGACTACACACAGATGCCATCGCTCATAATTGCACATTGTGCAAGTATGTTACGCTCAAACAGCGTCAGATGTTGGAACACTATCGCGTCACCCATGACCTAACACCTGACCAGGCTGAGGAGCTGTTAAAAGAATCTACCACCAAGTCAAATGTTAAAGAAGAGCCGCTGgggcaggaggaggaggtgaaAGTGTGCACTCTAGAGGATATGGAACTATTGATACCCACTGTGCTAACACCCGAAGACTATGCCCAGCCGCAAATGGAGACGGAGCAATTGCGTGAAATTGAACAGCAACTGGCTGTAACCATGGATAATCAGAATGTGAGCATTGGCACAGAGTATCTGGTACTGGCGGATGGCTCACTGCAACAGCTGGGTGAAGGCGGTGTGGTCATTGAGTATATAGATGATAGCAAGACCAACAGCAACTTAAATCTGCAGAATTTGCTTATGGAGCCCATGGACTTGGATATTAATGAGCTCATAGAGGAGGATGCAATGCCACAGCTTAGACCCAAACCCAAGGTGCCACTGTTGAAACACAAATGTAAGCTGTGTCCCAAGGCCTTTGCCACTTTGGCCCGTTTGAAATCTCATCAATTAACCCACAGTCATCTACCCAAATTCTACTGCGATCAATGTGGCTTCTATTCACTGCGTAGCTCTGATCTGGTACAGCATTATAAGAACATGCATCACAAGACATTGGATGAGGCGTTGCCGGGCGACGAGGCGCGTCCATTTTCCTGCGATTTGTGTCTGTTTGAGACCCAAAGTTCGGGCTCACTGCGTGTGCATTACAATGAGAAGCATCAGATACAGCCCACCGATATACACTTACGTCCCAGTTGGTCAACTGAGCTGCCGCATAAAAGCAGCAAACCTAAAACTAACCCAGAGCCTAGCGAAATGCAATTGGGTATTAAGTATCCACCTGCTACAGCTACCATGACTCTGGCTGATCATCATCAGCAGTTGCAGCAGCCACCACCGTTGCCGGCTCTTCCTCCTCAGGCCACCACCACAGCCACAATTACACCCACGGGTGATATTAGCGTGGTGGTAGATGCCACTGCCTTGTTCTATGCAGCTGGCACTGACCCCATCAACAGCAATCCCACTCAAAACACCCATGTAATGGATACCAGTGATCATAGCAATACATTTGCCATCTTTCCCGAAATCCCCACTAACACCACATCAGCCGCCAACACCACCATGTTTGGCGATATGCAGGATTTTATAGATAACACCGATGTGGCTGCCATATGCACCATACCGGCTGACGATATGCCTGTGGTGGATGGCGATGATATAGTCATTGATAATAATAACATAAGCCTGGATTTTGATGcagaaaatctgtttgaagagttcgaggaggaggaagaggatgTCGAAGCTGTAGTGGCCGTAGTGGATGAGGACGACGAAGACGaagaggatgaggatgatgcTGAGAATGAGGATGAGAATGATAACAATGATACGGCAGCAGATCAAAATCTGTTGTTAACCAGTGATGATGACGATGTGGATGACTTTGATGATGAGCAATCGAAGCATTTGCAGAAACCATATTGTATCTATTGTAATAAGAAGTTTACCAGTCAATACAAGTTTGAGAATCATATGTTTGTGCATAGGGGTCTGGCCCCCTATAGATGTGAGCTCTGCACCAATCTGTATAACATGAAGCGTCTACTGATCAGGCACTACAAGACGGTACACAAACGTATGCCCACTCGTGATATGGTACAGGCCAAGGGCGATAAAGTTTCGGTGGCACGCACCAACATTGAAAAGCTGCAACTTAAGGCGACAAACAATCCCATGCTGATGTGTGCCAAATGTCCGTTTGAGTGTGAATCGGATGCAGAAATGCGTAAGCATTTAAATGCACATCATGGCATCAATGATGGTGTTTCCGTCCATGCCAACGAGGTGTTCATCATACGCAAACTTCCATTTGAATGTCCGCGTTGTATACGTTCGTTTGCCGCCAAGCATACACTGACGCGTCATCTGCAGCGTAGCCATCTGGTGGATACCATCATTGAGTTGCAGGCACCCATACAGGCAACTACCAGTGCGGCAGACACAGCTACCACCACAACGTTGCCAGTGAATAGCAATGAGATGATGTCGTTGTCATCTGGTGATAATGGCGAATGCGAGGTAGAAGCTGCCATTATTAAACCAGATCCGGACAATATGGAGCTGGATGTGGGTATGGAAAACATAACGACAACGCCACCGGCCGCAACGGTAGCCACATCCTCATCTTCCTCCACGCTATTTCCCACACCCACGCCATTTGATTTTGACTATGATTTTATGGGTGATGCTGCTGGAgctgccaacaacaacaacaacaacaccacaacGACACCCACACCCAGCAGCAGTggcaataataacaataacaccAACACCACCGATGGCTATGCTGACTCGTCACCACTGCCACCCAATCATCTGCTCAATGGCAGCGATAAACTGTTGACCGCCGCCACCATGGATCCCTCACCTGTTAAGGATCTACGCTCGCGTCTACCCCGTACTCCCATCTATGTGTGCAAGCTGTGCAACAAAACGTTTGATGAGCTGGGTAAACTGGTGAAGCATGAAATGGAGGTGCATTCCAGTGACGAATCGAATCGTTTGACTTACGAGCACAAGTGTACCATTTGCAATACCACCTGCCGCACACCGGCATTGCTAAAGTTTCACATGAGGCGACATCAGGCACGTAAATTTCAGTGCAAACTGTGTCCCAAGGCATTTGGCAAGACCACGGAACTGGAGCGGCACACCAAGGCCAAGCATAACAGTGAAAAGTCCTTCAGATGCTCGTTTGATGGTTGTCGCAAgactttcaattttaaagctcaTATGGTTAGGCATCAGAATGCCTCGCATCTGAAGGTGCGCCATGTGTGTACCATATGTGATAAGGAGTTGATATCCAGTTCAAATCTAAGGATTCACATGAGTGTACATCGAGAACCTGTATCCTACAAGTGTCCCCAATGTGAGCGCCACTATCTGAGACGCGGAGCCATGCGTCACCATGCCTTACAGCTGCATCGCCTACAGCTAAGCGATGAGGATCTGgctgaaatttttaagaatacCGCACAAGAAATAAAGCTTCAAGCGCAGAAGGTCGATATAAAGCTGGAGAGTGGCGAGGTGAAGGAGGAACCGGGCTCCGAGTTAACCGAAGCCGTCGTTAATATTTTACGTTAA
Protein Sequence: MPATTTSKRLITEKEQQPLHSKSVCRCCLRSEAEFLRLDTQLVARNLDATSNSSGALDQIPLLSCLLFCIRTDRNPELSPYICKECSKSLLIAYYFLQNALRAHEILCRQLTKGKPARANGHIQQGQDDKSKSPTVRHECKICGQVINNRMELKQHIRLHTDAIAHNCTLCKYVTLKQRQMLEHYRVTHDLTPDQAEELLKESTTKSNVKEEPLGQEEEVKVCTLEDMELLIPTVLTPEDYAQPQMETEQLREIEQQLAVTMDNQNVSIGTEYLVLADGSLQQLGEGGVVIEYIDDSKTNSNLNLQNLLMEPMDLDINELIEEDAMPQLRPKPKVPLLKHKCKLCPKAFATLARLKSHQLTHSHLPKFYCDQCGFYSLRSSDLVQHYKNMHHKTLDEALPGDEARPFSCDLCLFETQSSGSLRVHYNEKHQIQPTDIHLRPSWSTELPHKSSKPKTNPEPSEMQLGIKYPPATATMTLADHHQQLQQPPPLPALPPQATTTATITPTGDISVVVDATALFYAAGTDPINSNPTQNTHVMDTSDHSNTFAIFPEIPTNTTSAANTTMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEEFEEEEEDVEAVVAVVDEDDEDEEDEDDAENEDENDNNDTAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLQLKATNNPMLMCAKCPFECESDAEMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKHTLTRHLQRSHLVDTIIELQAPIQATTSAADTATTTTLPVNSNEMMSLSSGDNGECEVEAAIIKPDPDNMELDVGMENITTTPPAATVATSSSSSTLFPTPTPFDFDYDFMGDAAGAANNNNNNTTTTPTPSSSGNNNNNTNTTDGYADSSPLPPNHLLNGSDKLLTAATMDPSPVKDLRSRLPRTPIYVCKLCNKTFDELGKLVKHEMEVHSSDESNRLTYEHKCTICNTTCRTPALLKFHMRRHQARKFQCKLCPKAFGKTTELERHTKAKHNSEKSFRCSFDGCRKTFNFKAHMVRHQNASHLKVRHVCTICDKELISSSNLRIHMSVHREPVSYKCPQCERHYLRRGAMRHHALQLHRLQLSDEDLAEIFKNTAQEIKLQAQKVDIKLESGEVKEEPGSELTEAVVNILR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00916592;
90% Identity: iTF_00917514;
80% Identity: -