Land015403.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lordiphosa andalusiaca
Gene Symbol
RREB1
Assembly
GCA_035044965.1
Location
JAWNNM010002901.1:312511-320224[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.042 2.6 8.9 0.8 1 21 234 254 234 256 0.93
2 12 0.00039 0.025 15.3 0.2 1 23 266 288 266 288 0.98
3 12 9.5e-05 0.006 17.2 7.3 1 23 294 316 294 316 0.98
4 12 1.8 1.1e+02 3.8 3.5 2 19 508 525 508 527 0.97
5 12 0.0099 0.62 10.9 0.1 1 23 672 694 672 694 0.97
6 12 4.3e-05 0.0027 18.3 1.3 1 23 704 726 704 726 0.99
7 12 0.00098 0.061 14.0 2.0 1 23 732 755 732 755 0.97
8 12 0.0035 0.22 12.3 2.0 1 23 1011 1034 1011 1034 0.95
9 12 0.0001 0.0064 17.1 0.3 2 23 1341 1362 1340 1362 0.97
10 12 0.17 11 7.0 6.3 1 23 1368 1391 1368 1391 0.97
11 12 0.0099 0.62 10.9 0.5 3 23 1579 1599 1577 1599 0.96
12 12 0.0016 0.099 13.4 4.8 1 23 1605 1627 1605 1627 0.99

Sequence Information

Coding Sequence
ATGCTGGCCACACAGAAGCCCACTCACGAGTCTGATATGGAACGTCCACGCCGGGACTCCACCACCTCGGAGTCCTCACTGGAGCACCTCGATCTCGGTCGCACACCAAAGAAGCtgagcagcaacagcggcgCCCCACAGCCGACCTCAACACCGCACGAGGTGTCGTCGGCGTCCCGCAAACGCAAACtgcgacagcaacaacaccatccacagcagcagcaacagcagcagcagcagccggcgCATCAGTTGTCAGCCGCATCAGAGGATGAGTTTGAGGAACAGCTggaggcaacagcagcaacagttgctGCGGTGCAGCGACCGCGTCACAAACAGCGACGcaacgccgccgccgccgccgtcgtcgttgctgccgctgccagcGCCAGCATTGTCATGGACTACAGTGCCGGCGATGTCAACTCTCTGCGCAAGAAATTCCGCCTGAATCGCAGCAGCGTCAGCACCCTGAACGGTGAACTCTCCGAATCGGGCTTTGTCGATGGCAGCGGCAGTGGCTTCCTGTTGAGCAATCACAGTGCACTGGCTGCAGCCTCCGGAAACAATAGCAACAATCAGGCCAGTGCCAGTGTATTGGCCTCCAGTTCGGCCAGTTCGGGAGCGTCCTCGCCACAGGGCCTGTGCCTGTCCAGTGCCGAATCTGGCATCGGTGCCGGCGATGAGCATATGAAATATCTATGCCCCATCTGTGAGGTGGTCTCGGCCACGCCCCATGAGTTCACCAATCACATAAGATGCCACAATTATGCGAATGGCGACACCGAGAATTTCACCTGCCGTATTTGCTCCAAGGTGCTCTCATCGGCCTCCTCGCTGGACAGACATGTGCTGGTGCATACCGGTGAGCGTCCATTCAATTGTCGCTACTGTCATCTGACCTTCACCACCAACGGCAACATGCATCGTCATATGCGTACACACAAGCAACACCAAACGACGGCAGCAACACAATCGGCGTCGGGTTCGCTTAatgcgcagcagcagcagcaacagcagcagcgccgacagcagcaacatcatcagcagcagcaacagctgggCGCCAATTCGGGACAAAACTCAACGGGTCCCGGACGGGCCGAGAGCTATGAGAGCGATGCCAGCTGCTCCACGGATGTGTCCAGTGCCAATAGTCAGAGCAGTAGCTCCCAGACCAACAACAATAGTCACAAGGCCACCAATCGGGAGGCGGCGGGTAAACTGAAGACCAAccataacaacaacatcatGGATGATGGCGGCGACATGGAAGAGCcagcggaggaggaggaggagaatgAGATGgaggatgtggatgtggatgtggcgCTGCCATTGTCCATTACCAGCACTCCAGATGTGGATACGCTGCTGGCGGGCGCTGGTCCGGGCTCGGGTGCAGCCTCGCCTGTGCCCAGCTTGGGTTTGAGTTGTCCCGCGTGCGGTGCAAGTGATTTTGATACGCTACCGGGTCTGTGTGCACATCTGGATGCACAGCATGGTGATATACCGGCCAAGTGTCGGGATTGTGATGTCATCTATGCCACACATCGTCAGCTGCAGGCGCATTGCTGTCGTGCAGCGGTGGGCGGGGGACTGCCTCCATTGCTGGGTGTCAGCAGTTCGCCTCTGCATGAGACGCAGGAGGAGCAGGATGCCGatgaggaggcggatgaggatgaggaggaggaggaagaggaggcaCGCCAGCAGGCCTCCGCCTCACAGCGCGAGGACTTCTTTCAGCAGCTGTACCTCAAGGGCAAGGGGCCCACCTCACCGCCCTCACCCATCAAGCACGAGCCAGCGGACAGCAAGGATCTGGCCGATATACAGAGCATACTCAACATGACCAGCTCCAGCTGCACCTCCAACTTTCTGCGCAACTTCGAGCAGTCGGTGAACACTCCCTGCTCCAGTCAGTACAGTCTGGATGGACGCGATGGCGAGGAAGAGGCCCAGGATGTGTTCACCTCGGAGTTTCGTCGCATGAAACTGCGCGGTGAGTTCCCCTGCAAGCTGTGCACGGCGGTGTTTCCCAATCTGCGCGCCCTCAAGGGTCACAATCGTGTGCACCTGGGTGCAGTTGGTCCCGCCGGACCCTTCCGCTGCAACATGTGTTCCTATGCGGTGTGCGACAAGGCAGCTCTGGTGCGTCACATGCGCACCCACAACGGCGATCGTCCGTACGAGTGTGCCGTCTGCAATTATGCCTTCACCACCAAGGCCAACTGTGAGCGCCACCTGAGGAATCGGCATGGCAAGACCAGCCGCGAGGAGGTCAAACGGGCCATCGTCTATCATCCGGCCGAGGATGCCAGCTGTGATGAGAGCAGCAAGTCACGTCTGGGCGATGAGCTCAATGAGCTGAGCTTCCGTTCGGTGACACCGCCTCCGCCTGCCAATGAGAGCTCCTCCCAGCTGAAGCATATGCTGATGGCGGAGACACAGCCTCAGCAGccaccacagcaacagcagcagcagcagcagcagcctccgccgccgccgctcaAGATTCAGGTCAAGAGTCTGGATCAGCTGGTGGACAAACCGCCACCAGTTAAGCCTCTCACACCGGCGGCCATGGATCTCAGCATGGATGTCCTAGATTTGAGCAAGAAACCCGCACAGGTGCCAGCCACACCCGCCACTCCGGCGGTAACCGAACTGGCCACTGCCCTggagcagcaacatcaacagcagcaacagctgctcCTGGCCCAGCAGCAACTCTTCGGGGCAGGCGATGCAGCCCACCAGTACATGCAGCAGCTGTTCCGCAATCTAATGTTCCAGCAAACCTCAGCCTTTCCCTTCTTTGGCTTTCCACTGGCTCCACCGCCGCCCACTAATGCTCCAGTCAATGGCAACGCCGACAAGCCCATGACCCCAAGTCCACCCCAGCGGCTGGGTCTTGGTCCGGTGGGTGTGCCCGTGCCCGCCGGCGGTCCCGTCAAGATGGTCATCAAGAATGGTGTGTTGATGCCCAAGCAGAAACAGCGTCGCTATCGCACCGAACGTCCCTTTGCCTGTGAGCACTGCTCGGCCAGGTTTACGTTGCGCTCCAACATGGAGCGACATGTGAAGCAACAGCATCCCCAGTTCTATGCCCAGCGTCAGCGGAGTGGCCATCATGTGATGCGGGGACGTGGTGCCTCCaatgcagctgctgccgcgGCAGCTGCGGCGGCTGCAGCAGCCGCCATGGGACCCCACAATCATGCACCCATCTCCGAGCAGGTGAAGTATGCCATCCTGGCGCAGCAACTAAAAGCACACAAGAACACCGACTTGCTGCAACAGGCCCTGGTCCAGGGTTCCAGCAGTGTGGCCCACAATACTCTCCTCAATTTCGGCTACAATCCGCATCCCCAGACCAACGGGAATGGCCAGGTGGTTAGTGCCCTGGACGATGATGAGCCCAAGTTGGTCATAGATGAAGACGAGGCGGAGGAAGTGGAAGAGTTTGAAGAGATGGACgatgaggaggatgatgaggaggaggaggaggaggaaatGCTAGAGCCGGAAATGCCACAGCCAGTCACTCCCACTCCAGCTCCCGCCATTGAGGCGGCCAAGAAAGTGGCCGAAACCATACTCGAGCAGGCCATCAAGGCGGGCAAGCCCACCCCACCGCCAGTCAGCCCTGAGCCCGCCGCCACACCCGCcgctccaccaccaccaccacacacCATGAAAACCATGATTGCTCAGGCCGAGTCCGTGGCCAAATCTTTGAAAGACGTCGCCAGCTCCCCATTTAAGGATGAATCTCAGGATCTGGTGCCGGTGGCCAAACTGGTGGACAATGCCACCAGCAACCAGGTGAGCTTCAACAGCTACTTCCGTCCCAGCGATGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGCCTCGTGGCCTCGGGCAGTGCCAGCGAGAGCAACAACTCCGGCACCGAGGACGTCACCTCCAGTTCGAGCAGCGAGCCGAAGAAGAAGTCCGCCTACAGTCTGGCGCCCAATCGTGTCTCGTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGTTCCCTGCGCCGTCACATACTCACCCACACGGGCCAGAAGCCCTTCAAGTGCTCCCACTGTCCCCTGCTGTTCACCACCAAAAGCAACTGTGATCGCCATCTGTTGCGCAAGCACGGCAACGTGGAATCGGCCATGTCCGTGTATGTGCCCACCGAGGATGTGAGTGAGCCCATACCAGTGCCCAAGTCGGTGGAGGAGATAGAGCTGGAGGAGCAGCGTCGTCGCAGGGAGGCGGAACGTCAGGAGCAGGCGGAACGCGAGCGGGAGAAGGAGAGGGAGCGAGAGCGTGAGCAGGAGCAAGAGCGTGAAAGGGAGCGCGAGCgggagcagctgctgcagcagctggcggcggcggctcaACTGAGTCAGCAAATGAATGTGGCGGCCGCTGCGGCGGCTGCAGCCGCTGCCGCCTCCTCCGGCAACGAATCCGCGGGCGGAGATCTGCCCTACAAGTGTCATCTGTGCGAGGGCTCCTTTGCGGAGCGTTTGCAGTGTCTGGATCATATCAAGCTGACGCATGCCCAGGAGTTTGCGCTGCTGTTGGCCAAGGGAGCCATTGAGACGGAGGCACTGGAGCCGCCACAGCCAGCGGTGACCGCTCCCGCCTCCGATGATGAGGCGGGCAGCCGGGGCGGTGCCAAATATCCCGACTATAGCAATCGCAAGGTGATCTGTGCCTTCTGTGTGCGTCGCTTCTGGTCCACCGAGGACTTGCGTCGTCATATGCGCACCCATTCGGGCGAGCGACCCTTCCAGTGTGAGATTTGCTTGCGCAAGTTCACGCTGAAGCACAGCATGCTGCGTCACATGAAGAAGCACAGTGGGCGGGCGCATAATGGTGAGCTGCCTGGTTCGGATTGTTCTGATGATGAGCAGGTAACCACACCGCCCAGCACACCCTTGCCGAttaaccacaacaacaacaacaacagcaacagtaacaacaacaacaacaacaatgtcaACTCCAAGCTGGGCCTGCGCCTGCCCAAGCTGCACGAGCTGCTGGACAAGGCCAATGAGTGGCGTGCCAGTCGCCTGGGCGAGCACAAGGAGAACATTGGCGAGGCCACACCCTCGGCCCACTCCACCGCCGGCTCAGTGGCCGGTTCGGATCTGATAGGCAATCTGTTGGGCATCAGTGATCAGGGTATACTCAATAAGTTGCTCTCATCGGCCGATGAGGCAGCCAAGTTGCTGGGAGTGGACAAGTAA
Protein Sequence
MLATQKPTHESDMERPRRDSTTSESSLEHLDLGRTPKKLSSNSGAPQPTSTPHEVSSASRKRKLRQQQHHPQQQQQQQQQPAHQLSAASEDEFEEQLEATAATVAAVQRPRHKQRRNAAAAAVVVAAAASASIVMDYSAGDVNSLRKKFRLNRSSVSTLNGELSESGFVDGSGSGFLLSNHSALAAASGNNSNNQASASVLASSSASSGASSPQGLCLSSAESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTTAATQSASGSLNAQQQQQQQQRRQQQHHQQQQQLGANSGQNSTGPGRAESYESDASCSTDVSSANSQSSSSQTNNNSHKATNREAAGKLKTNHNNNIMDDGGDMEEPAEEEEENEMEDVDVDVALPLSITSTPDVDTLLAGAGPGSGAASPVPSLGLSCPACGASDFDTLPGLCAHLDAQHGDIPAKCRDCDVIYATHRQLQAHCCRAAVGGGLPPLLGVSSSPLHETQEEQDADEEADEDEEEEEEEARQQASASQREDFFQQLYLKGKGPTSPPSPIKHEPADSKDLADIQSILNMTSSSCTSNFLRNFEQSVNTPCSSQYSLDGRDGEEEAQDVFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCSYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDASCDESSKSRLGDELNELSFRSVTPPPPANESSSQLKHMLMAETQPQQPPQQQQQQQQQPPPPPLKIQVKSLDQLVDKPPPVKPLTPAAMDLSMDVLDLSKKPAQVPATPATPAVTELATALEQQHQQQQQLLLAQQQLFGAGDAAHQYMQQLFRNLMFQQTSAFPFFGFPLAPPPPTNAPVNGNADKPMTPSPPQRLGLGPVGVPVPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAMGPHNHAPISEQVKYAILAQQLKAHKNTDLLQQALVQGSSSVAHNTLLNFGYNPHPQTNGNGQVVSALDDDEPKLVIDEDEAEEVEEFEEMDDEEDDEEEEEEEMLEPEMPQPVTPTPAPAIEAAKKVAETILEQAIKAGKPTPPPVSPEPAATPAAPPPPPHTMKTMIAQAESVAKSLKDVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRREAERQEQAEREREKEREREREQEQEREREREREQLLQQLAAAAQLSQQMNVAAAAAAAAAAASSGNESAGGDLPYKCHLCEGSFAERLQCLDHIKLTHAQEFALLLAKGAIETEALEPPQPAVTAPASDDEAGSRGGAKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRAHNGELPGSDCSDDEQVTTPPSTPLPINHNNNNNSNSNNNNNNNVNSKLGLRLPKLHELLDKANEWRASRLGEHKENIGEATPSAHSTAGSVAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00920114;
90% Identity
-
80% Identity
-