Land002382.1
Basic Information
- Insect
- Lordiphosa andalusiaca
- Gene Symbol
- ZNF574
- Assembly
- GCA_035044965.1
- Location
- JAWNNM010000227.1:1490814-1492951[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.17 11 7.0 0.2 2 23 308 330 307 330 0.95 2 10 0.54 34 5.4 0.4 6 23 340 357 340 357 0.98 3 10 0.0009 0.057 14.2 1.7 1 23 363 385 363 385 0.98 4 10 0.00063 0.039 14.7 0.4 1 19 400 418 400 418 0.90 5 10 0.00026 0.016 15.9 0.7 1 23 431 454 431 454 0.97 6 10 4.8e-05 0.003 18.2 1.6 3 23 462 483 460 483 0.92 7 10 0.0016 0.098 13.4 0.4 2 23 495 517 494 517 0.97 8 10 9.5e-05 0.0059 17.2 4.1 1 23 524 547 524 547 0.93 9 10 3.5e-06 0.00022 21.7 0.8 1 23 553 575 553 575 0.98 10 10 9.9e-05 0.0062 17.2 1.3 1 23 581 604 581 604 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCCTGCGTGCTCTGTTTCGGATGCTGCAGTGAGTCCTTAGGCTTGAATTCCCCTGAAGGAGCGCGTCTCGACATACGCGGAActataaacaaacattttgtgttctTTGAGTCACCTCTGGCGGAGCCTCCCGCCACCTGCGAAGTCATTTGCCAGGATTGCTGGCAGAGCTTAAGCTCCTTCAATGAATTCCACCAAAGGGTCTTTCAACTGCACCAGCAACGGCGTGGGGGGGAAAAAAGTCTGGCCATTGAGTTCTGTGGCGAGACAGAAGCCGTTAATCCCCTCTACACCGGTGAACTGGATGCCCTTGCCGAGGGATTCTTTGCTCCTAGTGAAGTCAAAGTGGAGGTTAATGAGCTAGAACCCTTGCCCAAGGTGGAGCTGCTCGAGGATCCTGTTAAAACTGAATCTACTAGGGAAAAAGCGAATAGCAAGCGAAAAATTAAGAATGAGCAGTTACCGGCCAGCGACTCAGATGGCGATAGACCACTGGCCGATTTCTTGAGCTCTCCCCCGGCAGCAGGCCCACTGCGACGAAGCACGCGTCGAGGTCGCccaccaaaaatttcaaaggaAGCTCCGCCCTCGCCCACTCCACTTAAACAGGAGTTCGATTCAGATGACGATCATGATATGGACTTTGTGGCCGCTGAAGCTGTACTGGGTACCGATGACAGCGATAGCTCCTCTTCCACTGAGAGCAGCGATGACAATGCGGATTCCTTGCCAGATATTGAGCCTGTGGAGCAATATGCCGAGATACCTAAGCGGGTGGTGGTAAAGCCCAAAAAGTATCGAAAGCGACCCAAGCCTCTGGTGGCTCCAGTGCGTATGAGTCGCGATGAGATCGAAAAGCGCAAGCTACAGCAAAATGAATACGATGAGATCATCCTGCAATTCTTCAAGAAGCTGCCCTGTGACGTTTGCAATCTGTTGGTCCAGAACTTTGCCGATATGAGACGACACCAGCGCATGTCCCACAACATCGAGTCGGGTTACATCAATTGTTGCGGGAAGAAGTTTCACATCCGCAAGTCACTGGCGGAGCATGTGCTGGTGCATCGCAATCCAGAGCATTTTATGTGCTCCCAGTGTGGACGAGTGTGTCAGGACTCGCGCACGCTGGAGCTGCATGAACAGACGCATACGAATCCCCAGGCGGGGTCTGAGACGAAAGAGAAGCGCATTTATCAGTGCGAAAAGTGTCCCAAAACATTTACCACCAAGGCGGCCATAGAATATCATGATGTGTCCAAACATGTGCCCAAATCAGAGTTCAAATTTACGTGTCCCGAGTGCAATAAGAAAATTCCCACAGAGCGCAAACTGAAGGAGCACTTGCGCTACATGCATGATCCGGAAACGGCCATCATTTGCGACAAATGCGGCAAGACTTTGCGCTCCCAAACGAATCTCAAGAAGCATCACGAGCTTGAACATTCCGAGGCGCCTCGTCCCAAGCCCGACCCAGTGCAGTGCGAAATCTGTGGCACATGGCTGCGTCATTTGTCCGGCCTGAAGCAGCACATGAATACGGTACACGAGCCGCCCGGAGATGAGCACCGTTGTCCCATTTGCAATAAGACTTCCACCAATTCCCGTGCTCTGAAGCGCCACATATATCACAATCATCAATGCGAAAGGAAGTTCAAGTGTGGCATGTGCGAGAAGGCCTTCAAGCGGCCGCAGGACTTGAGGGAGCACACCTCCACGCATACTGGGGAAGTACTGTACACCTGTCCCAACTGCCCCATGACCTTTTTTTCCAACGCCAACATGTACAAGCATCGCCAGCGCTTGCACCGTGCCGAATGGGAGGCGGATCGGAAAAAGCCTTTGCCACCCAATATCATGAAAATCTCGCAGGGAGCCACCACGGCCATGAAGAAGCGCCAGGCTGCTCTCTATCCAGTGGCACAGGTGGCCATAGCTGACACTTCGCTCGCCCAGTAG
- Protein Sequence
- MEACVLCFGCCSESLGLNSPEGARLDIRGTINKHFVFFESPLAEPPATCEVICQDCWQSLSSFNEFHQRVFQLHQQRRGGEKSLAIEFCGETEAVNPLYTGELDALAEGFFAPSEVKVEVNELEPLPKVELLEDPVKTESTREKANSKRKIKNEQLPASDSDGDRPLADFLSSPPAAGPLRRSTRRGRPPKISKEAPPSPTPLKQEFDSDDDHDMDFVAAEAVLGTDDSDSSSSTESSDDNADSLPDIEPVEQYAEIPKRVVVKPKKYRKRPKPLVAPVRMSRDEIEKRKLQQNEYDEIILQFFKKLPCDVCNLLVQNFADMRRHQRMSHNIESGYINCCGKKFHIRKSLAEHVLVHRNPEHFMCSQCGRVCQDSRTLELHEQTHTNPQAGSETKEKRIYQCEKCPKTFTTKAAIEYHDVSKHVPKSEFKFTCPECNKKIPTERKLKEHLRYMHDPETAIICDKCGKTLRSQTNLKKHHELEHSEAPRPKPDPVQCEICGTWLRHLSGLKQHMNTVHEPPGDEHRCPICNKTSTNSRALKRHIYHNHQCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQAALYPVAQVAIADTSLAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00914786;
- 90% Identity
- iTF_00919310;
- 80% Identity
- -