Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010002237.1:1303231-1309631[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.1e-07 2.5e-05 24.7 0.8 1 23 215 238 215 238 0.98

2 8 1.2e-05 0.00078 20.0 0.6 3 23 250 270 248 270 0.95

3 8 0.0016 0.098 13.4 0.4 1 23 279 302 279 302 0.94

4 8 0.011 0.71 10.7 0.3 3 23 312 332 310 332 0.96

5 8 0.00014 0.0086 16.7 7.4 1 23 338 360 338 360 0.98

6 8 0.00016 0.01 16.5 0.1 1 23 365 387 365 387 0.98

7 8 1.2e-05 0.00076 20.0 1.8 1 23 393 415 393 415 0.97

8 8 0.017 1 10.2 4.0 1 23 421 444 421 444 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.1e-07	2.5e-05	24.7	0.8	1	23	215	238	215	238	0.98
2	8	1.2e-05	0.00078	20.0	0.6	3	23	250	270	248	270	0.95
3	8	0.0016	0.098	13.4	0.4	1	23	279	302	279	302	0.94
4	8	0.011	0.71	10.7	0.3	3	23	312	332	310	332	0.96
5	8	0.00014	0.0086	16.7	7.4	1	23	338	360	338	360	0.98
6	8	0.00016	0.01	16.5	0.1	1	23	365	387	365	387	0.98
7	8	1.2e-05	0.00076	20.0	1.8	1	23	393	415	393	415	0.97
8	8	0.017	1	10.2	4.0	1	23	421	444	421	444	0.97

Sequence Information

Coding Sequence: ATGAGTTCAACTGACTGGCATCTGTGGTGTCGTCTGTGTGCCAAAGACGATGTGCAGGGTAATATCAATGTGTTTCTCAAGAATGAGCAACAGACTTCGGGTGCGGATGGGGGGGCTCCAATTGGCGATCTGGCTTTGGCAACAGCCATTGGCAGGTATTTTTGGGTGAATaTAAGCCGAGGTGAAGAGCTGCCGGAGATGATATGCACTGAATGTTTAACTCTGGTCACCTCCCTGGTCAACTTCTCCGAGAAGATTACCCGAGTGCAGAAGCTGTATTGTTTATTACAAAGCCACAAGCAAGATGAGGAGGACCCAAATTTAAAGGAGTTGAGAATAAGATTTGGTTTACTTGGCGAGGAAGAGCAGGTGGAGCTGGAAACTCTTACCGAGGTCCACTATGTGGATGAGATGCCCAAAATAATTcaagaagaggaggaagaaATGGACACCGAATTCGGCTATGAATTAGAAAATCCGCTGAATGAGccggaggaagaggaggatgAGCCGGAAGCTGAGCAGCAGGAAGAGGTTATACTACAGCTATGTGAAGCGTTTGCCCTCAATGAGGAACAAGAGGATGAGGATGTCAATCTTTCTACCAAATCCAAACTCCGCCAACAAAAACGTGATAAATCCCATCAGTGCACGGAATGCCCACGTGTCTATGCCACCGCGAGTACTCTCAGCCGGCACATGCGGATGGATCATGCCCAACTGAAGGAGTCTAGTCCACATCTCGCCTGCCCCGAGTGTCCAAAGAAATTCCATTCACCCTGGAATCTCAAACGACATGCCCAACAACATCTGCCCCTGCCCGAACGCAAAACCTATCCCTGTTCCAGTTGTGACAAAATGTTCACCACCAGCATCTCCGCCCAGCAACATGCCCAGTACATGCATCTGGACGAGCGACCACGTCTCGTCATCTGCGAACAATGTGGCGTCTCCGTTCACTCACTGAGCGCCCTAAAAGAGCACACCCTTAAGCACACCGACGATGCTCCCTTCGAGTGTGATGTTTGCAAGAAATGCTTTAAGTCCTCCAGACGTCTGAAGCATCACCAGGAGACACATGATccgtataaatatatatgtccTGAGTGTGGCATGCAATTGAATTCGAAACCCACGCTGAATCGTCACCGACTGGTACACACCGATCAGATGCAACACAAGTGCgatttttgtggtcgggaattTAAGCGAGCGAAAGCGTTGAAGAATCATTTGATACTCCATACGGGACTCAAACCATATTCGTGCGATTTCTGTGATCGCACCTTTGCCAATGGCTCCAATTGCCGTACGCACAAGAAGAAGGTTCATCCAGAGGAATTGGCCGCACAGGAAGCGGCCGGTGGGGCAAAGAGCTATAATCGTAATATACCCAAACTGGAGGCGCTTAAAGCATTTACCAAAAACAAGGACAACCTGTCGCCGGTCGCCACCAAGCAGAGTGGTTGCTTCGCCTTTGGCAAAAAACCAAAGCCGTTGGTTAAAACCGATGCAGATGTTCCGCAGTTGGTAGTGGTGGTGCCGGAAACCTCTCCATCGGCCACCTCTCCATCGGCCACCTCCTCCAACATACCCACcatagacaatatttacaatcaCATATTGAAACAATCTCCGCCAGCTCACAAATCGGAAGCCATCCAACCAACATATGTGatgcagccacagcagcagttGGTGATCTCAAGTGATGGCAGCGCCACACTGGTGACCACCACGAGCTCTACCGCCAGTAGCAGCACCGGACAGGCCATACAGGATGAGCAAATGGAGTCCAGTGGGGGCTCAACTCAGGTCTTTTCATATTAA
Protein Sequence: MSSTDWHLWCRLCAKDDVQGNINVFLKNEQQTSGADGGAPIGDLALATAIGRYFWVNISRGEELPEMICTECLTLVTSLVNFSEKITRVQKLYCLLQSHKQDEEDPNLKELRIRFGLLGEEEQVELETLTEVHYVDEMPKIIQEEEEEMDTEFGYELENPLNEPEEEEDEPEAEQQEEVILQLCEAFALNEEQEDEDVNLSTKSKLRQQKRDKSHQCTECPRVYATASTLSRHMRMDHAQLKESSPHLACPECPKKFHSPWNLKRHAQQHLPLPERKTYPCSSCDKMFTTSISAQQHAQYMHLDERPRLVICEQCGVSVHSLSALKEHTLKHTDDAPFECDVCKKCFKSSRRLKHHQETHDPYKYICPECGMQLNSKPTLNRHRLVHTDQMQHKCDFCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKVHPEELAAQEAAGGAKSYNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKPLVKTDADVPQLVVVVPETSPSATSPSATSSNIPTIDNIYNHILKQSPPAHKSEAIQPTYVMQPQQQLVISSDGSATLVTTTSSTASSSTGQAIQDEQMESSGGSTQVFSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919314;
90% Identity: iTF_00917460;
80% Identity: -