Basic Information

Gene Symbol
ZNF526
Assembly
GCA_035044965.1
Location
JAWNNM010002673.1:93717-95664[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.041 2.6 8.9 0.1 1 21 298 318 298 319 0.96
2 10 2.9e-07 1.8e-05 25.2 0.5 1 23 327 349 327 349 0.99
3 10 0.027 1.7 9.5 1.4 1 23 352 375 352 375 0.92
4 10 1.6e-06 0.0001 22.8 0.8 2 23 382 403 381 403 0.98
5 10 4.3e-08 2.7e-06 27.8 1.0 1 23 409 431 409 431 0.98
6 10 2.2e-06 0.00014 22.4 1.0 1 23 437 459 437 459 0.99
7 10 0.0053 0.33 11.7 3.2 1 23 465 487 465 487 0.98
8 10 0.00085 0.053 14.2 0.4 1 23 493 515 493 515 0.98
9 10 0.00023 0.014 16.0 4.9 1 23 521 543 521 543 0.99
10 10 0.00027 0.017 15.8 0.1 1 23 549 571 549 571 0.98

Sequence Information

Coding Sequence
ATGGACATCGAAAAGATATGTCTCACCTGTTTAAGTCTCACTGGTCCATTTCTTTCCATTTACGATGATGGATCAGGCAGCTGCTTGGCCGACATGCTGGGAGATTTCACTAAGACAAAGCCGCGACGCCAGAATAATCTGCCGGAGAAGGTATGCCTCAACTGCCTGAGCGAAATCAATCATTGCTTCACCTTCAAAATCAAGTGCGAGAATTCGATTCGAACTCTGCGACAGCTGCTGCCCAATGCTTTGCCCGAAGAACCCAATGTGGAGCATGTGGCAAAACCAGCTGTTTGCACCTTGGACCAAGCTGTGCAGACCAATGAAATCACACTAGAAACTGCTACCAGAGAGGTGCAAACAGATGACGTTTTTAGCCAGgatcaaaagcaacaaaccAGCCCAGAGAAGGCACAAgcgcaggaggaggaggaggttgGCGTGGAGGATTTTGATTATGAGTTTAACCAGGAGACGGGAGACAAGGAACGAGAGGAGAAACATCCCTTAAAATATGAAACCGATATGATTTTTAATCAGGAAGCTGAGCAGGAGACGAGCAAAGTGCAAGATGAATAtaacttttccatttttaataattccaaTGGTGAAACGGAGATTTCGCCGGCCTCTCCTGTGCAGCAGGTTACCACACGGAAAAGTGCTGCGAAATTACtgctccaacaacaacagcaacaccaggAGCAGGAACAGGCACATGAAATTGAGTtaccacaaaaacaacagtCGAAGAGGAGTTCCCGCCGGCGGCCGGTTGGAAAGTGGGAAGATCAGGCCGACGTTTCGCCCTCCTCACCACCAAAACGTGTACGCAAATCTCTTAGCTCAACTGCAGTCGCAGTAGCTGGCACTCCCGTGGCTGAGCTTAAATATCGCTGTGACCGCTGTAACGCTGGCTTTGCCCTGGAAAAATCCTTGATCATACATCGCCGTCAAAATGGTTGTACCAATCGCAATTTCAAGTGCAAGGACTGtgagaaagtttttgtttcgcCCGATCACTTGGCCGAGCATCAGGCCACTCATGGCGCGCACAATTGTCAAGAGTGCGGACTGCTGTGCGAGTCCAAGGAACAGCTGGGCCGGCACATGGTGCAGGGTCATAAGCGTAATTTGCGCAATCAGTGCAATGTCTGTCAGAAGGTCTTCACCATGCTCTCAACCCTGCGAGATCACATGCGCATCCACACGGGCGAGAAGCCCTTCGTGTGCAACATCTGCGGCAAGAGTTTTACTCAGAACGCCAATCTTCGCCAGCACAAGCTACGTCATTCGGAAACCAAAAGTTTTAAGTGCGATCAATGCTCCAATTCGTTTGTGACCAAGGCCGAGTTGACTTCCCATATACGCACCCATACAGGAGACAAGCCCTTTGAGTGTGAAGTTTGTATGGCCAAGTTTACCACCAGCTGTTCATTGGCCAAACATAAACGCAAGCACACCGGCGAACGTCCCTATGCCTGCGAAATGTGTCCCATGCGATTTACGGCCCTGAATGTGCTGAAAAATCATCGAAGAACCCACACTGGCGAGAGACCCTACGTGTGTTTGCATTGCCCGAAGAGTTTCACGCAACGCGGCGACTGCCAGATGCATCAACGTACCCACGAGGGTGATAAACTATACGTTTGTCCTGTCTGCAGTGAGGGATTTAAGACCATGGCCGAATATCGTACACATTTGGCTGTACATGAACAACAGGATAAACGATTGATCCATCATTTCACATTGTTGAGTAACAAGGAGAACGGCAATGAGGGATTGGTAAATGAATTGgatgaagaggaggaggagacaTCATTAATGCTTTAA
Protein Sequence
MDIEKICLTCLSLTGPFLSIYDDGSGSCLADMLGDFTKTKPRRQNNLPEKVCLNCLSEINHCFTFKIKCENSIRTLRQLLPNALPEEPNVEHVAKPAVCTLDQAVQTNEITLETATREVQTDDVFSQDQKQQTSPEKAQAQEEEEVGVEDFDYEFNQETGDKEREEKHPLKYETDMIFNQEAEQETSKVQDEYNFSIFNNSNGETEISPASPVQQVTTRKSAAKLLLQQQQQHQEQEQAHEIELPQKQQSKRSSRRRPVGKWEDQADVSPSSPPKRVRKSLSSTAVAVAGTPVAELKYRCDRCNAGFALEKSLIIHRRQNGCTNRNFKCKDCEKVFVSPDHLAEHQATHGAHNCQECGLLCESKEQLGRHMVQGHKRNLRNQCNVCQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCDQCSNSFVTKAELTSHIRTHTGDKPFECEVCMAKFTTSCSLAKHKRKHTGERPYACEMCPMRFTALNVLKNHRRTHTGERPYVCLHCPKSFTQRGDCQMHQRTHEGDKLYVCPVCSEGFKTMAEYRTHLAVHEQQDKRLIHHFTLLSNKENGNEGLVNELDEEEEETSLML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00915553;
90% Identity
iTF_00917400;
80% Identity
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