Land008669.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lordiphosa andalusiaca
Gene Symbol
kipf
Assembly
GCA_035044965.1
Location
JAWNNM010001711.1:313970-322184[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 2.3e-06 0.00014 22.3 2.5 1 23 158 180 158 181 0.95
2 13 7.2e-06 0.00045 20.8 2.3 1 23 187 209 187 209 0.99
3 13 8.4e-06 0.00053 20.5 0.2 1 23 215 237 215 237 0.99
4 13 4.7e-05 0.003 18.2 4.0 1 23 352 374 352 374 0.97
5 13 0.0002 0.013 16.2 0.4 1 23 379 403 379 403 0.97
6 13 4.5e-06 0.00028 21.4 3.5 1 23 409 431 409 431 0.99
7 13 9.1e-08 5.7e-06 26.7 1.1 1 23 437 460 437 460 0.98
8 13 6.7e-07 4.2e-05 24.0 5.6 1 23 486 508 486 509 0.96
9 13 0.0016 0.1 13.4 0.1 2 23 539 561 538 561 0.96
10 13 0.0072 0.45 11.3 8.3 1 23 610 632 610 632 0.96
11 13 0.0067 0.42 11.4 5.6 1 23 636 658 636 658 0.99
12 13 2.6e-07 1.6e-05 25.3 3.0 2 23 664 685 663 685 0.97
13 13 0.0015 0.097 13.4 1.9 1 23 718 741 718 741 0.96

Sequence Information

Coding Sequence
ATGGAGAACATTTGCCGGGTTTGTATGGACGGCTCTGTTACTCTAGTGGAAATATTTGGTGACGAgagggaggaggaggagctcGATCCGGAGAAGAATCTGGCTTATGTGCTCAACCAGTGTGCCAACTGTCAAGTGACACGAGAAGATCTATTGCCGCACCAGATATGTTTGTCCTGTGTGCTGGCCGCGCAGAATGCATTtcgttttaaacaaaaatgcgAAGAGAGCTATGAGCATCTTTGCCAGCTTATCGAGCTGGGCAGGCGACGGGAGCGAGATGGTACGGAGATGGTTAATGCGGAGGACGGTATCCAGGTGATGGATGTGACGTGTATCAAAGTTGAACCAGGCTTAGAGCCGGAACAGCAAGATGAGATAATCCCATCACAATTTGTCAAGACGGAAGACTTATCCATGCCACTAACTGAAGAGCAGTCAGATCTTTCAAGACCCTTTGAACTCGCACCGCATCCCTGTGAGATGTGTGGTAAATCTTTTCGTGGCCGTTTTGAGCTCAACAATCACATTCGGGTACATCATACGGGCGAGCGTCCGTTTAAGTGTCCTCATTGTCCTAAGACCTTTTCGGTGCGTCTCTATATGAGGAATCACATCCGAATCCATACCGGGGAACGACCCTATAAGTGTCCAATGTGTCCAAATGCTTTTACTTTGCCAAATACACTGAAGGCACACATACGTAGGCATGCAGGTGCCGGGAATCGTTTGCTTTCGCGCAAGCTATTTCACTGCGATTGCTGCTCGGCGGCATTTCGGGAACACTATCGTCTGCGGCAGCACAAGCAACTGAAGCATCGCATGAGCGAGACACTGACGAAGGAGCAGGGaAGACTCACTCAAAGGCTGTCTCAACACCCACCGGAACGTGAATTACCAATAAGACCAGCTGCAGGGATTCACCGACATATCGTTGTCGAGGAGAGTCATGTTGAAATCAAGAAAGAGCCAAACGAAGGAGATTCGTTTTCCAACGAGTTTCTACCCAAAAATGAGGATCCCACCAATACCACCCAATCTCCGGATAAGAATTTCTGCTGTACGACCTGCGGCAAGCGATTTCAATACAGATACGCTCTGACCAATCACATCCGCTGGCATATGGTGCGCCCCCATCCGTGTCCTAAAGCCGAATGCCCGCAAGCATTTCGAACTGATGCCAAACTTAAGATGCATTTGCGTACCCATGCCGCGGATTGGCCCTACAAGTGTAGCGAATGTCCAAAGGGATTTTACAGTAACTGTAAGCTCAACGAACACATGCGCACCCATACTGGCGAACGACCATACAAATGTCCGCATTGCCCCAATGCTTTTACccagaaaaataatttaaaccGTCATATTCGAATTGCACATGTACAGCCAAACCGAGGCACCGATGTGGAAATACCCAGGAGCCAACCCCAGAGACATATACGCGGCCACACCGGCTTCCAGTGCCCTCACTGTCCCAAGGGTTACACCCAGAGTCATAATTTAAAGACCCACATTCGTATACACCACGGCCAGGCAGAAGGTTCTGAAAATTCGGAGATTTCCGACTCTAGGAAAACTCCTGGAAAAAATCTAACCAAGCCCACTCAGAGCATTCGCTGCCCTTGGTGTCCAATTGCATTCCGAGATCAGGTTAAGGCGAAGCTACACATGCAGGTGAAGCACAAAAACCGAATGGCTGTAACAGGTATGGATGGGCCAGCTGAAGAATTGAGTGCTGGAGCCCAGCCGGAACCTctaaagtcagaaaagaaaGACAGTGAATGGGTTCCCAAACAGCcgaaaaagcaacagcaagcCCAGAAGTCGCATGTGTGTGGATCATGCTGTAAAACGTTCTACCGCAGACATGACCTCACCAGACACATTCGTACACATCAGCGGCCCTACAAGTGTGCCCACTGTCCCAAACTGTTTCAATTGCACAGCAAACTCAAATTGCATTTGCGTCGTCACACGGGCGAACGATTAAAATGTCCTCTGTGTCCTTGCACCTATACACGAAGTGATAATTTGCGCAAACATATGCGCACCCATAAGCATCAAGAGGATGTTCATAGTGCAGTTCCAGATGTTGCTGGCACGTCGGCAGCGGATAGTGAGGTAAGCGAACAGACGGGGGAGGGGGAGCCCTATAACTGTGAATTGTGTACCGAGagttttgaatataaatactACCTGCGACTTCATAAACTTATGAAGCATGGCATCAacgaggaggaagaggagcaggaggaggataTGGACATAGAACCTTTGGCAGAACTTAAAATGCATTTAGGTGAAAcggagcaacaacaaagcttaCGGTTGCGGGAAATACGAAGTAGACCTGGAGCTGGTGCTTACGAAGAGCTGGAATGCGAAGATATGGATATGGATTGGCGtcgtttaaacaaaaaacaaaacttgaacTCAAATTTCAATCAAGAACCAACGATTGAGCAGCTGCCGGCGCCGTTCCTGCCCGAGGTTCAAACTATGCTTAAAACGTAA
Protein Sequence
MENICRVCMDGSVTLVEIFGDEREEEELDPEKNLAYVLNQCANCQVTREDLLPHQICLSCVLAAQNAFRFKQKCEESYEHLCQLIELGRRRERDGTEMVNAEDGIQVMDVTCIKVEPGLEPEQQDEIIPSQFVKTEDLSMPLTEEQSDLSRPFELAPHPCEMCGKSFRGRFELNNHIRVHHTGERPFKCPHCPKTFSVRLYMRNHIRIHTGERPYKCPMCPNAFTLPNTLKAHIRRHAGAGNRLLSRKLFHCDCCSAAFREHYRLRQHKQLKHRMSETLTKEQGRLTQRLSQHPPERELPIRPAAGIHRHIVVEESHVEIKKEPNEGDSFSNEFLPKNEDPTNTTQSPDKNFCCTTCGKRFQYRYALTNHIRWHMVRPHPCPKAECPQAFRTDAKLKMHLRTHAADWPYKCSECPKGFYSNCKLNEHMRTHTGERPYKCPHCPNAFTQKNNLNRHIRIAHVQPNRGTDVEIPRSQPQRHIRGHTGFQCPHCPKGYTQSHNLKTHIRIHHGQAEGSENSEISDSRKTPGKNLTKPTQSIRCPWCPIAFRDQVKAKLHMQVKHKNRMAVTGMDGPAEELSAGAQPEPLKSEKKDSEWVPKQPKKQQQAQKSHVCGSCCKTFYRRHDLTRHIRTHQRPYKCAHCPKLFQLHSKLKLHLRRHTGERLKCPLCPCTYTRSDNLRKHMRTHKHQEDVHSAVPDVAGTSAADSEVSEQTGEGEPYNCELCTESFEYKYYLRLHKLMKHGINEEEEEQEEDMDIEPLAELKMHLGETEQQQSLRLREIRSRPGAGAYEELECEDMDMDWRRLNKKQNLNSNFNQEPTIEQLPAPFLPEVQTMLKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00919971;
90% Identity
-
80% Identity
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