Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010000660.1:206834-208585[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00063 0.039 14.7 3.8 2 23 156 177 155 177 0.97

2 15 1.2e-07 7.5e-06 26.4 1.7 1 23 183 205 183 205 0.98

3 15 2.7e-05 0.0017 18.9 3.4 1 23 211 233 211 233 0.99

4 15 4.3e-06 0.00027 21.5 1.0 1 23 239 261 239 261 0.99

5 15 8.1e-07 5.1e-05 23.8 3.0 1 23 267 289 267 289 0.99

6 15 4e-06 0.00025 21.6 3.6 1 23 295 317 295 317 0.99

7 15 1.2e-05 0.00077 20.0 4.6 1 23 323 345 323 345 0.99

8 15 7.7e-05 0.0049 17.5 1.3 1 23 351 373 351 373 0.99

9 15 7.8e-06 0.00049 20.7 5.1 1 23 379 401 379 401 0.98

10 15 0.00033 0.021 15.5 4.0 1 22 410 431 410 431 0.97

11 15 5.3e-05 0.0033 18.0 3.6 1 23 438 460 438 460 0.98

12 15 4.3e-06 0.00027 21.5 0.5 1 23 466 488 466 488 0.99

13 15 2.9e-05 0.0018 18.9 1.2 1 23 494 516 494 516 0.95

14 15 6.8e-07 4.3e-05 24.0 4.0 2 23 523 544 522 544 0.97

15 15 2.1e-05 0.0013 19.3 3.6 1 23 550 572 550 572 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00063	0.039	14.7	3.8	2	23	156	177	155	177	0.97
2	15	1.2e-07	7.5e-06	26.4	1.7	1	23	183	205	183	205	0.98
3	15	2.7e-05	0.0017	18.9	3.4	1	23	211	233	211	233	0.99
4	15	4.3e-06	0.00027	21.5	1.0	1	23	239	261	239	261	0.99
5	15	8.1e-07	5.1e-05	23.8	3.0	1	23	267	289	267	289	0.99
6	15	4e-06	0.00025	21.6	3.6	1	23	295	317	295	317	0.99
7	15	1.2e-05	0.00077	20.0	4.6	1	23	323	345	323	345	0.99
8	15	7.7e-05	0.0049	17.5	1.3	1	23	351	373	351	373	0.99
9	15	7.8e-06	0.00049	20.7	5.1	1	23	379	401	379	401	0.98
10	15	0.00033	0.021	15.5	4.0	1	22	410	431	410	431	0.97
11	15	5.3e-05	0.0033	18.0	3.6	1	23	438	460	438	460	0.98
12	15	4.3e-06	0.00027	21.5	0.5	1	23	466	488	466	488	0.99
13	15	2.9e-05	0.0018	18.9	1.2	1	23	494	516	494	516	0.95
14	15	6.8e-07	4.3e-05	24.0	4.0	2	23	523	544	522	544	0.97
15	15	2.1e-05	0.0013	19.3	3.6	1	23	550	572	550	572	0.98

Sequence Information

Coding Sequence: ATGGCACAAAGAGCAATCGGGCTAACTGTGCCCGAGCTATGCTGCGTCTGCATGGCCACTCCGGGTGTGGGCACCAGCTGGCTGAATATTTACACCGACTCGGATGCGgaacaaaatttgatgtttCTCATAGAGGAGACAACTTGCCGAAAGATTAGGCCTGCTGGGGATTTACCTAGACTTATATGCCCCCCTTGCTTGTCAGAGGCCAAAATTACTTTGAATTTCAAGCGGCGATTGGAGCAGAGTCTCAAGTGCTTCGTCGAACAGTTGGAGCAGAACGAGTCCGGATCCTTCTTGCAAGCAGTAAGCACTGTGTACGGACAGCAAGTCAAGCAAGAGGTGGACTTCCAAAGCGACACTTCAAGCGAAGCAACCGATTCGGAAGACTTTGAATCTTCAACggacgaagaagaagaagagacACTCACTGACCTAGGCAAAGCGAGCGTTGAGCAGCCCTTGAAATGTTCCCACTGCTCAGCAACCTTTGTCAGTAAGAAAAAACTGGATCAACATCTTCGCAAGCACACTGGCTTACGCCCTTTTGAGTGTACAGAGTGCTCGAGGACATTTAGCCGAAGTGACAGTCTAAGGAGACACCTACTTACCCATACCGATGAGCGACCCTACGAATGCTCCCACTGCTCCAAGACCCTGCGCAGTAAGCGTACCCTGGAGCAACACCTACGCATTCACACTGGCGAGCGTCCCTTTGAGTGTTCCTACTGCTCGAAGAGCTTCACCATTAAGCCCAGCCTGGAGCTGCATCTTCGCACGCACACTGGCGAACGACCGTACCAGTGTACAGAGTGCTCAAAGTCTTTTGGCTCAAGTAGCTCCCTAAGGCATCACCTGCTGACACATACCGGCGAGCGACCTTTCCAATGTTCCCACTGCCCAAAAACCTTAAGCAGCAAGCGTTCTCTGAAGCAACACCTACGCATTCACACTGGCGACCGTCCCTTCAAGTGTTCCGTCTGCTCGAAGACTCTTTGCAATAAGCGGAATCTGGAGCAGCACCTTCGCACGCACACGGGCGAACGTCCTTTCAAGTGTACAGAGTGCCCAATGTCGTTTGCCCTTAAGGTTACGCTAAGCCATCACCTACTTACTCATACGGACGAGAGGCCCTTTAAGTGTTCCCACTGCTGGAAGTCCTTTAGGCGGGCAAACACTCTGAAGACTCATCTTTACACTCATACCGGAGGACGACCTAGCAAGTCATTTGAATGTTCCCACTGCACGAAGACATTTAGCTGTAAGGGCAATCTGGAGCAACATCTTCGCACGCTTACTGGCGAACGACCTCATAAGTGTACAGAGTGCTCCATGTCGTTTGGCCAAAGAAACACTCTAAAGCGACATCTACTTACTCATACGGGCGAGCGACCGTTTGAATGTCCCCAATGCTCAATGACCTTCAATCAGAGAGGCTCTCTGAATGGTCACCTTCGTACACATACACGCGATCGACCCTTCAAGTGTACCCAGTGCTCAGAGTCCTTTTCCAGTGCAGGCGATCTGAACAGACACTCTTTTAGTCATACGGGCCAGCGCCTGCTCGAATGCTCCCACTGCTCCAAGACGTTTGTCAGCAAGAAAAATCTACAACAACATCTGCGCACGCATACCGGCGAACGACCTCACCAGTGTACAGAGTGCTCCAAAGCCTTTAGCCGTAAGACCATTCTAAGGAAACATATGCTTACTCACACTGCTCCAATATCTTCACCCACAAAGGAGCTCTAA
Protein Sequence: MAQRAIGLTVPELCCVCMATPGVGTSWLNIYTDSDAEQNLMFLIEETTCRKIRPAGDLPRLICPPCLSEAKITLNFKRRLEQSLKCFVEQLEQNESGSFLQAVSTVYGQQVKQEVDFQSDTSSEATDSEDFESSTDEEEEETLTDLGKASVEQPLKCSHCSATFVSKKKLDQHLRKHTGLRPFECTECSRTFSRSDSLRRHLLTHTDERPYECSHCSKTLRSKRTLEQHLRIHTGERPFECSYCSKSFTIKPSLELHLRTHTGERPYQCTECSKSFGSSSSLRHHLLTHTGERPFQCSHCPKTLSSKRSLKQHLRIHTGDRPFKCSVCSKTLCNKRNLEQHLRTHTGERPFKCTECPMSFALKVTLSHHLLTHTDERPFKCSHCWKSFRRANTLKTHLYTHTGGRPSKSFECSHCTKTFSCKGNLEQHLRTLTGERPHKCTECSMSFGQRNTLKRHLLTHTGERPFECPQCSMTFNQRGSLNGHLRTHTRDRPFKCTQCSESFSSAGDLNRHSFSHTGQRLLECSHCSKTFVSKKNLQQHLRTHTGERPHQCTECSKAFSRKTILRKHMLTHTAPISSPTKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00917367;
90% Identity: -
80% Identity: -