Basic Information

Gene Symbol
Trerf1
Assembly
GCA_035044965.1
Location
JAWNNM010003033.1:1-12210[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-09 3.3e-06 27.4 0.1 2 45 1401 1444 1400 1445 0.93

Sequence Information

Coding Sequence
ACCTGCTGCAAGATCTTTGGAAATGCTTCGGCGCTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATACATTTGTGCGCTCTGCTCAAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATCGGAATAAGAAGCCTTACGAGTGTAAGGCGGATGGTTGCGGCAAATCGTACTGCGACGCGCGCTCACTGCGACGTCATTCGGAGAATCATCACTCGGGCTCGGACTTGCCCACGACCACCGCCAACCAGTCGCTCTCACCCACCACCAGCTCCAGCGGGGcgagcagtagcagcagcagcagcagcagcggcggcggcagcggaaGCGGTGTGGGCGTGGCCACGAGCACACTGAGCCTTTCACCGGCCACAGCCAGCGGCGATGCCAGCTCTCCAGATGGAGCCACCTGCATACGCACCTACATTTCCACCGGCAGCTCGGTAGTGGATGCAGCCACAGGCATTGCCCTATCCGAGGAGCAAATCAAGGCCATGAATTTGCCCATCAAGACGGGAGTAACGCTGCTATCGCCCACCACATCGACTTCCTCGATAGCGTCGTCCACAGCCTCATCGTGTTCGTCCTCGTCTCTCTGCCCATCAGCCCCAACGTCCACGGTGGCCACCTCCAGCACTTTAATCGCCAGCTCACCCACCATAACACTCAGCGATGGCACCAGTCTCGAGGGCGAGGGACTCACGCGCGAGCAACTGGATCTCATTAGCAAGATCATGCAACAGACAAAGCAAACCAGTGCCCAGGTCACGGTCTCCTCACCCACCAGCGTCAGCTCCTACAAGATCAACACAAACACCACGGTCCAGTCGCAGTCAAGGCCACGCACCTGGAACATGCAATTGCTCAACAATTCACAGAACGTAACGGTTACCGTGGAGGATGGCACCGATTTGGTGGCCACATCGTCATCCTCCTCCTCGAGCTCTCCCGTTGAGGTGAAGGAAGAGGAACTGAGTCCACAGCTGGTGGCCGCCATTAATCCGCATCTGCTGAATATTGTGAAGCTGGACAAGCCAGTGGAGTGCAATCTGTGTCACCGTAAGTTCAAAAACATACCCGCCCTCAATGGGCACATGCGTCTGCATGGCGGCTACTTCAAGAAGGATCCGGAAACGAAGCGGAGCGAGAAAAAGGACTCAAACGGGCCACCCCTGCAGACGGCCAGCATAGGGGTGCGCGCACTCATCGAGGAGAAGATTATAAGCAAGCGCAAAGATATCACTAAGGGCGCCTTTGTGGTTCCGGCACCACCGAATAGCGCttgcaccaccaccaccctaCGTCGATCGATTAGCGATCTGGAGAGCTTTCTGAATCCAAAAAGTGGTAACAGCACTCTAACTCAGGCGCTGGCCAGCAGCACGGGAACCACCACAGCGGTATTGCCGGCAGCTACCACCATTAAGAGCAGCAACGGTCTGAGCATACAGCAGATTGGTCTTCCCCAGAGCATCGAAATCTTTAGCGGTGGCCAGAAGCAGTCAAAGACACTCAGTTTGGGCAGTGGCACCAATACCATTACCATAACCACCAACAATGTGCCCACCACAACCACAATGAGTGCTCTCACAGCTCTGAAGGCTGGCGGTACCCTCAGCGGTGTTGGCGCCAGCACAAACAGTGATCCCAAGGACTCTACTCTGATAGAGCTACTTAAGCGCGGTACTCGCATTGCGGTGACCTCCAAGAAGACGCAATCACAAACTCAAACCTGCGCCAATATGCTGATGAGCAGTGGTATTGCAGAGCTAACGGCGCTGGGTGGAGGAGTAGGAGTTGGAATGCATTCGGCTGGACGCCAGATTATCACCAACAACAATCGTACAGTGATTATACCCTCCGATGTGCAGGTGGTGTCCACCAAAAGCAAACTGAGCAGCCTCTCTAGTCTGGTGAGGGCGAATAGCAACATGACTGGCGGCTCATGCTCAACCGGTAGCATTTCTCTGGCCGATGGCACTCCCCTCGCCCTGACCATTGCACCCAGTCAGGAGGGAAACGGCGGCAGTGGTGGTGCCACCTCGGGTGGAGTCATTACCAGCGGTGGCAATGGAGTCTACACTGTTACCTACACCAGCGATGGCTCCGATCTGTTTGACGATGCTGAGGTCTACAATGTGTCCGACACGGAAATGCTGCTGCAAACGGTGGACACCATGGAGCTGCTCAACGATGACGAGGACGAAGAAGTTCCCATCAAGACAGAACATTCCGAGGACTTTGCGCTGCTCAGCGAGGCCGGTGACAGTGCCCACACGCAGCTCATCAAGCTAGAGCCGGATAACAGCAATGGGAACACCATGGCTCTGCCCACCTTCCAGCAATTCCATTCCAAGGAACTCATCATGCAGAACAGCTCACAGATTCAGGCTATTGCCAGCATGCGTGGTGGTGTTCTCACGTCACCGATTCACTCTCCGCTGGCATATCCCACGCCGCCTTCGAGTCATGAGAATATGGCCCAGTCCTCGCCGTTTATAGAAGATGCGGCGGCGCAGTTTGTGGACGCCAATCATACTTTCTTTGGCGACAAAACGGACTTCTCGCATATTTACTTTAAGACTGATGAGAGTCCGACCAACGAGCAGCTGagcgacaacgacaacgagaAGATCCTCAAGCTCAAGTCCGTACTCGAGGAGAGCAGCTTTGACCCCTCGATTAAGGTTGAGGATTTGTTGAATGCCACCAACGACGACGACACCGAGTGCGATCTGCGCGAGTTTGCCGAGACGAATCTATCGTTTCTCGATGAGGACCAGGAGTTTCTCAATGACTCGCGTAATGCCACTTCGCCGCTCTCAGAGTCGTTCTTTACCAGCGGCATCGGCTCGGCGGAGGATGTGAAACAGGTGCTGCGCGAGGTGCTGCCGGATGAGCACATGCAGTTGCCGTTGTCGAGCGAGCAGCAGGGTGAGAACATTATAGATCTCTACTACTTGCCAGGATTGGGTCTGCAGTCGCAGATGATGTCCAATTCTGAGGATCCACTGTTGTCCTCCTCACCGCGTGAATTTGGCCAACAGCGTCAGTTGGGCTTGCCGCATGTTGAGCAACAACTGTACCAGCCCCCGGTAGAGCAGGCAGcagatcagcaacaacagcagcaacagcagcaacaacagcagcagcagcaacagcttctGCTGCCTCAACAAACCCTTAACCAACTGGATgctgcaccaccaccaccaccaccacagtCCAACACACAACAGCAGCCGGACTTTATGATGCCCTTGGTGGGTGGCCAGAACTTTGCTCCCGCGATCAGTCAGTCGCAGCAATTTGTGGATGCCAATCAGCAACATATGACTGGACAACCGCTCAACAGTCTGCTGCAACCGCTGCTCTATGGAGTAAGTTCGTCGGGCAGCTCGGGTAACGACTCCCTGCTGGCGGCCGCCGATTGCCCCACGAATTCATGCCAGAGCACAGGTCTCGATGGCAGCCTGATCTTTACCTGCGGCTCCAACAATTCCCTGAACAACAGCCTGAGCAGCAACGGGAGCCATATCGGGAGCAGATCCCTACTGGCCGCATTACCCACTTCTGTGCCCACACCCGTGGTCATGACCGCCACCAGTGTATCCAACCTGCAGCCATTGTCCAATCAAACCAATTCCATACTGAAACGACGCTTGCGTTCGAGTGCCTCCCAGGAGACGCACAAGTTCTCGAAATTCCATACACTGTCGCCACATCGCTCCAAGCTGCGCAAGCCCTCGCGCACCCATTACACGCCGGCGCCCATCTTGAATCCCGACCGCAAGGGCACTGGACTGTACTGCCAGGTGAGCAATCAGCTGGGTCAGGGCATTTTCGATGTGTTCGACGATGACTTTGGCGACCCGGTGGGTCTGGTCGACTTCTCCGACGAGTCCAAGGTGAACCTGGGCTCGACCTATCAGGTCCAGATACCGGCCTGTCGCCCGCTGGAGGAAGCAGCCAACGATACGGCTGGCGCCGAGCTTATGTGGAATCCCGACGTACAGGAGGATGAGAAGATACTGATGCGCTATATAGATCTCAGCAAATCCTCGGCCGTTCCAATGGGCAGTCATTCCGAGGAGGTGGCCCTGCAAACGCTGCTCAAGTCCAAGGGCAActcggcggcggcggtgctTACCCTGCTGCAGACGCAATCCGGTGCATTCCAGATGAAGTGGACCGCTCACGAGCTGGAGCAGTTTCTGCGCGGTCTGGAAAGGCATGGCAAggattttggcaaaattgcCAGCGAGCTACTCACCAAGACCTCTGGCGACTGTGTGCAGATGTATTACTTCTGGAAGAAGCTCTGCGTGGACTACAAGGTGTCGCATTTGAAAATGGAACCGGTGACGCACACCACGCCCGCCATTGAGAAGCCCTATGTGTGTGAGATAGCCGACTGTTCGGCGAGCTTCAGTTCGAAAGCGGCGCTGCACGGTCATGTTCGCATTCACGCTTATGGCCGCAATgccggcaacaacagcagcaacagcaacagcaacaacaacaacagcagcagcagcaacagcaacaacaacaacaacaacaacagtaacCAGCATGCCTCGGCAAATAgtgccagcagcaacaaccatcACAGttccaccaccaacaacaccaacagcaacaataacaacaacaacaacagcaacagcaatcaCAGCGGCTACGCATGCGCCCCCCtctccagcaacaacagccatcAGGCATGCAATGCAACATCAACAACTGCAACCCACGCTAACAACAGCAATTCCAATGCCGCCGCCAACACCGCAACATCGTCCTGCACGACATCGACATTGACAGCAGGCAAACTAGACCCAAGCAACACCATTAGTAGCATCAATAGCGCCAAGGATGGCGAATTTCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTGAAAAGTCGCAGCGCTCATATGAAAACCCATCGCGTACAGGACACGGAGCAAACATCCAAGTCAACGGCCAATGCAGTTCCAGCGATCGCGGCCTCATCATCCACCTCATCCACGGTCAACATCACCACGTCGTCAGCATAG
Protein Sequence
TCCKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHSGSDLPTTTANQSLSPTTSSSGASSSSSSSSSGGGSGSGVGVATSTLSLSPATASGDASSPDGATCIRTYISTGSSVVDAATGIALSEEQIKAMNLPIKTGVTLLSPTTSTSSIASSTASSCSSSSLCPSAPTSTVATSSTLIASSPTITLSDGTSLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTNTTVQSQSRPRTWNMQLLNNSQNVTVTVEDGTDLVATSSSSSSSSPVEVKEEELSPQLVAAINPHLLNIVKLDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKRSEKKDSNGPPLQTASIGVRALIEEKIISKRKDITKGAFVVPAPPNSACTTTTLRRSISDLESFLNPKSGNSTLTQALASSTGTTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSGGQKQSKTLSLGSGTNTITITTNNVPTTTTMSALTALKAGGTLSGVGASTNSDPKDSTLIELLKRGTRIAVTSKKTQSQTQTCANMLMSSGIAELTALGGGVGVGMHSAGRQIITNNNRTVIIPSDVQVVSTKSKLSSLSSLVRANSNMTGGSCSTGSISLADGTPLALTIAPSQEGNGGSGGATSGGVITSGGNGVYTVTYTSDGSDLFDDAEVYNVSDTEMLLQTVDTMELLNDDEDEEVPIKTEHSEDFALLSEAGDSAHTQLIKLEPDNSNGNTMALPTFQQFHSKELIMQNSSQIQAIASMRGGVLTSPIHSPLAYPTPPSSHENMAQSSPFIEDAAAQFVDANHTFFGDKTDFSHIYFKTDESPTNEQLSDNDNEKILKLKSVLEESSFDPSIKVEDLLNATNDDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDEHMQLPLSSEQQGENIIDLYYLPGLGLQSQMMSNSEDPLLSSSPREFGQQRQLGLPHVEQQLYQPPVEQAADQQQQQQQQQQQQQQQQLLLPQQTLNQLDAAPPPPPPQSNTQQQPDFMMPLVGGQNFAPAISQSQQFVDANQQHMTGQPLNSLLQPLLYGVSSSGSSGNDSLLAAADCPTNSCQSTGLDGSLIFTCGSNNSLNNSLSSNGSHIGSRSLLAALPTSVPTPVVMTATSVSNLQPLSNQTNSILKRRLRSSASQETHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCQVSNQLGQGIFDVFDDDFGDPVGLVDFSDESKVNLGSTYQVQIPACRPLEEAANDTAGAELMWNPDVQEDEKILMRYIDLSKSSAVPMGSHSEEVALQTLLKSKGNSAAAVLTLLQTQSGAFQMKWTAHELEQFLRGLERHGKDFGKIASELLTKTSGDCVQMYYFWKKLCVDYKVSHLKMEPVTHTTPAIEKPYVCEIADCSASFSSKAALHGHVRIHAYGRNAGNNSSNSNSNNNNSSSSNSNNNNNNNSNQHASANSASSNNHHSSTTNNTNSNNNNNNNSNSNHSGYACAPLSSNNSHQACNATSTTATHANNSNSNAAANTATSSCTTSTLTAGKLDPSNTISSINSAKDGEFPCKVCGKVFNKVKSRSAHMKTHRVQDTEQTSKSTANAVPAIAASSSTSSTVNITTSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00914837;
90% Identity
iTF_00918607;
80% Identity
iTF_00914837;