Land009310.2
Basic Information
- Insect
- Lordiphosa andalusiaca
- Gene Symbol
- retn
- Assembly
- GCA_035044965.1
- Location
- JAWNNM010001900.1:2138451-2156268[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-26 1e-22 80.6 0.0 2 89 317 402 316 402 0.96 2 2 2.7 6.5e+03 -2.1 0.3 29 61 507 540 494 584 0.56
Sequence Information
- Coding Sequence
- ATGCATAAAAAGCAAGAAGCCGTGATGGAGCTGAAGCAGCGACTCTCGGCCATGCGTGGCGTACTTCTTGCCAAAGAGTCACGGCTGGCAATATCACACGGCGATCGAACGGATGACGAGATGAGGGACTGCGATTCCGTGGACGGTGATCATCAGCATCAGTTAAGCGCCAAGGCGGCTATAGCAGCTCGTCTCAGTCACACAGTagccggcggcggcggtggagtTGGTGGCCTCAACTTTGCCAGTCCCGAACAGCAAACAGAATTGCCCCTGAGCCATCATCATCAATTGCCGCCAAATCATCCGCTGAATGCACTGGGCAGCTTTATGGGTATCGGTGGACTACATAGCATTCCAAATCTGCAGCACAGCGATGTGCTGGAGAAGCTCAAAATGCAAGTGCGTGACATGAAGGTGGGACTTATGGAACAGGACTATGCGGCCGCTGCACATGCTGCCGCCTTTGGTGCCAACATGCTGCCCACTACCATAGGCTCAGCCTTTCCCCTGTCCCACAACTCAGTGGCTGCCGCTGCGGCAGCTGCATCCTTTGGTCATAACACATCGGCAGCGCCCACGGTCAGCAATAATGGCAATGGAGCGAGCTATAATAATGGGGTAACTGGCGGCAATGCAAACAATTCGATTGGTGGCaacaaccagcagcagcaacagcagcagcaacagcagcagcagcagcccaatCCAACTTCTGCCAGCAATCCAGCCACCAATGGGACCGCCGGCAATCATCCCTTCTCATTCGCCTCACCAACGGCAGCGCCCAGCGCCAAAGAAGCCCCCCGACACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTGTATGAAATCAATGATGATCCCAAACGCAAGGAGTTCCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATTAATCGATTACCCATTATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTATAATCTGGTGATAGCGCGTGGCGGCCTAGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCGGCGTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCATACGAGTGCGAGAAGAAGAACCTCAGCACTCCGGCTGAACTGCAGGCGGCGATTGATGGCAATCGCCGGGAGGGACGTCGCTCCAGCTATGGTCAGTACGAGGCGATGCACAATCAGATGCCACTGACGCCCATTTCGCGTCCACCGATGCCGGGTGGCATGCAGCAGATGTCACCCCTGGCCCTGGTCACACATGCGGCCGCGGCCAACAATCAGCAGGCCCAGGCggcagccgctgctgctgctgcccatcGACGACTGATGGGTGCGCCGGGCTTTGGTCAGATGCCCAATTTGGTCACCCAAGAGATTGAGAATCGCATGATGGAATATCTGCAGCTTATACAGGCCAAAAAGGAGCAGCAGAGCCTCAATGCGGTGCATCATCcccaccagcaacagcagcagcagcagcaacagacaCAGCCCACCCAGCAGCAATCACATCacctgcaacagcagcagcagcagcagcgccagcGTTCCCCCAGTCCAGAGATGAGCACACGAGAGGCACTCAGTGCTCAGGTGGCGCTGTGGCATATGTACCACAGCAATACCAGTCCGCCGGCTTCCGCCCACACCTCCCCGCAGCAAAGGGAAGCCCTCAATCTCTCCGACTCTCCGCCAAATCTAAACAATATCAAACGGGAAAGGGAACGTGATCCCACACCCGAACCACTGGACCAGGACGAAGCTCCGCATCAGCCACCGCCGGCCAAACGTGTGGGCAGCGGTCTCATGCCACCCGGTTTTCCAGCCAACTTCTATTTAAATCCCCACAACATGGCCGCCGTGGCGGCCGCTGCCGGTTTCCATCATCAGGCGAACAGTGGCAACCACCTCCATCAGCAGCAGGATGCCGCCTCCGAGGGTGAGCCGGAGGATGAGTATGGCAATAATGAGCACAATACCACCGGCAATTCATCGTCCATGCACGAGGATGGCGAGCCACAGCAAATCAATGGACaccatcatcagcatcagctgGACAAATCCGATGACTCGGCCATAGAGAATTCCCCCAGCACTTCGAACACCACACACCGTCACAGCTCGCCGGTATCCACCAAAAAGAAGTCACAAGCGGGAGCAAAGGATACGAAAGGAGCAAGCGACAAGTGTACGGGTGGCAAATTGAATCCTCTAGAGACGCTGAGTTTGCTCTCGGGTATGCAGTTTCAAGTGGCACGCAATGAAACGGGCGAGAATGGCGAGCCCCAGCTCAGGGTGAACCTCGAGCTGAATGGCATCAAGTACTCGGGCATCCTAGTGGCTCATGTACCCCTGGCAGACAATGAGGAAGCTGCCGAGTGCTCCGAGGAGCCAGTGGAAATGAATAAAaacgagcagcagcagcaggatgaggaggaggaagcGGAATGCACGTCTGTCAAGGAGGAAACCAGCGAGCGAGAACTAGATACCACTGCGGCCATTGTGAATGGTGTCAGTGGTGGTAAtggcggtggtggtgctggtggtggtggtggtgtgggTGTAGCCTTGCTAAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MHKKQEAVMELKQRLSAMRGVLLAKESRLAISHGDRTDDEMRDCDSVDGDHQHQLSAKAAIAARLSHTVAGGGGGVGGLNFASPEQQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTIGSAFPLSHNSVAAAAAAASFGHNTSAAPTVSNNGNGASYNNGVTGGNANNSIGGNNQQQQQQQQQQQQQPNPTSASNPATNGTAGNHPFSFASPTAAPSAKEAPRHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGAPGFGQMPNLVTQEIENRMMEYLQLIQAKKEQQSLNAVHHPHQQQQQQQQQTQPTQQQSHHLQQQQQQQRQRSPSPEMSTREALSAQVALWHMYHSNTSPPASAHTSPQQREALNLSDSPPNLNNIKRERERDPTPEPLDQDEAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGNHLHQQQDAASEGEPEDEYGNNEHNTTGNSSSMHEDGEPQQINGHHHQHQLDKSDDSAIENSPSTSNTTHRHSSPVSTKKKSQAGAKDTKGASDKCTGGKLNPLETLSLLSGMQFQVARNETGENGEPQLRVNLELNGIKYSGILVAHVPLADNEEAAECSEEPVEMNKNEQQQQDEEEEAECTSVKEETSERELDTTAAIVNGVSGGNGGGGAGGGGGVGVALLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919648;
- 90% Identity
- iTF_00917852;
- 80% Identity
- -