Lbim005025.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- pnr
- Assembly
- GCA_948107665.1
- Location
- OX403588.1:269931-275238[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-16 3.2e-13 49.4 3.3 1 35 491 524 491 525 0.97 2 2 9.9e-18 2.3e-14 53.0 7.5 1 35 552 585 552 586 0.97
Sequence Information
- Coding Sequence
- ATGGAGAGCGTCCAGCACCTGGAGCGCGAGGGCGAGGAGGTGCGCGAGGAGGACGTCGCCGTCGAGGCGCTGCAACTCGTCAAGAACGAGGAGCGACTCGAGCACCACGCGCCCTCGCCGCTCGCGCAGCACGCCGCCGCGCAGCACGCGGCCGCGCAGCACGCCGCCGCGCAGCACGCCGCCGCGCAGCACGCCGCCGCGCCGCCGCCGCCGCCGCACGCCGCCGAGGACGTGCGCCCGCACTCGCCGCAGCACGCCGCGTCCGTCATCACGCGGCGCGGCATGCGCACCATCACCGCCGCCGGACACATCACCGAGGGCTCACCGGCGCCCGAGGACGGCGTGAAAGACGAGCCGCCCGAGCCGCCGCCGCTGGAGGATGCGGGCGCGGCCGCCGGCCACCACTACGCGCCCAAGCTGGAGGACTTGCCGGAGCACGCGCACGCGCACGAGTACGAGGAGCGGCTGCGGCTCGCGGACGCCGAGGCGGCGCGCTACCTCGCCTTCAAGCAGGAGCCCTACCGCGCGCTGCATTCGCCCGCGCCCGCGCCCTCGGCCGCGCCCGGCGACAAGCGAGCCGTGCCGCGCGCCCGCGCCGCGCCCGCGCCCTACCCGCGCGCGCTGGCGCTGCGCTACGGCGCGCCGCACCACGTCATCATGGCGCAGGACGGCGAGCCGGCGGAGCACGCGCACTCGCACCAGCACGCGCACGACGCCTTCCTCTCGCACAAGGAGAAGGGCGAGCCGCAGTACGAGGGCGGCGAGGCCGCGGGCGGCTCCGACGCGCGCCAGTACGCCGCCGCGCTCGGCGAGCAGGCGTCGGCCGCGCTCGAGATGATCCAGACGACGGCGCTGAGCAACCAGCAGGCGGTGGGCGTCGCCTACCAGCCGGTCAAGTACGAGACCCGCGGCGAGGGCGAGGCGCGCGCCGGCACCTACGCCAGCCTGCAGCCGGTGACGTCGGTGCACGGCGGGTACGCGTACGCGGCGCCGCAGTCGCCGCAGTACGGCGCGCCCGGGCAGGCCTACCCGGCCTACGGCGCGCTGTACGGCGCGGCCGGCGCGGGCGGCGCGGGCGCGGGCGCGGCCGAGGCGGCGCGCGCGCGCGGGGACGAGTCGCCGCCGGGGCTGCTGTACCGCGCGGACCCCACGCTGGCGTCGTCGGCGCTGGGCCGCCAGCACGTGGTGTACGGCTCGGTGGTGGGGCAGGCGGCGTACGAGGCGCCGCCGTCGCCGGCCGCGCAGCAGGTCACGCTGTACACGCACGGCAACGCGGTGCAGTACAAGGTGGGCGGCGACCACTACCTGGGCCAGGGCGGGCAGGTGGAGTACGTGCCGGTGTCGGGGTACGAGGGCGGCTTGCTGGTGGAGGGCTACCCGGCGCCCGCGCAGGGCTGGCCCGCGCACAACCTGCTGCCTATCGACGACGGATTTGACCCCAGCATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCGACGACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTCAACCGGCCGCCGCTCAAAGGACAGAAGGCCAAGCCGCAGCAAGCGCTGCCGACGAACGGCAACCGTCGCGTAGGTGTGACGTGCGCCAACTGCCGCACGTCCAACACGACGTTGTGGCGACGAAACAACAACGGCGAGCCCGTCTGTAACGCCTGCGGACTTTACTACAAGCTTCACAATGTCAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACACGTAAGCGCAAGCCCAAGAGCATGGGCGGCCACTCCGGAGTAGCGCGCCCCGCCCCGCCGCCGCTCTCCGTGGAGGCACACTCTCACAAGGTGCTGCCTCCGCTGTACGCCGCGGTGGAGGCGGGCGCGGGAGCGGTAGCGGGTGCGGGCGCGGGAGCGGGCGCGCCCTTGCTGCTACTGCCCAGACACCAGCCCGATATGTTATCAACGTTAGAGCGGAGCGTGGTAGCGGTGTCGACGTCCTCGCAGTACCGCCCGCCCTAA
- Protein Sequence
- MESVQHLEREGEEVREEDVAVEALQLVKNEERLEHHAPSPLAQHAAAQHAAAQHAAAQHAAAQHAAAPPPPPHAAEDVRPHSPQHAASVITRRGMRTITAAGHITEGSPAPEDGVKDEPPEPPPLEDAGAAAGHHYAPKLEDLPEHAHAHEYEERLRLADAEAARYLAFKQEPYRALHSPAPAPSAAPGDKRAVPRARAAPAPYPRALALRYGAPHHVIMAQDGEPAEHAHSHQHAHDAFLSHKEKGEPQYEGGEAAGGSDARQYAAALGEQASAALEMIQTTALSNQQAVGVAYQPVKYETRGEGEARAGTYASLQPVTSVHGGYAYAAPQSPQYGAPGQAYPAYGALYGAAGAGGAGAGAAEAARARGDESPPGLLYRADPTLASSALGRQHVVYGSVVGQAAYEAPPSPAAQQVTLYTHGNAVQYKVGGDHYLGQGGQVEYVPVSGYEGGLLVEGYPAPAQGWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGHSGVARPAPPPLSVEAHSHKVLPPLYAAVEAGAGAVAGAGAGAGAPLLLLPRHQPDMLSTLERSVVAVSTSSQYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -