Lbim005022.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- GATA-B
- Assembly
- GCA_948107665.1
- Location
- OX403588.1:240624-244134[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-18 3.2e-15 55.8 3.3 1 34 57 89 57 91 0.97 2 2 9.3e-19 2.2e-15 56.3 6.8 1 34 126 158 126 160 0.97
Sequence Information
- Coding Sequence
- ATGCGCGCTCGGGTTACACCGTACACTCGGGCGGCGAGCGAGCGCCAGCGGCGCCCGCGGGTCACGGCCTGCCACCGCCGCGCCGCCGCGCCGCGCCGACCTCGGCTACCGTGCCCACGACCAGCTAACGAGTTGGAGATGGCGGAGTTGTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCGCACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACTACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCACGCCGCGCTCGCGCTCGCCGCGCCCGCTCACGACATGGGCACCAAGCGGCCGGGCGTGCAGTGCACCAACTGCCACACCACCACCACGTCGCTGTGGCGCCGCAACGCGCACGGGGAGGCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAATATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATCCAGACGCGGAAGCGGAAACCGAAGAATAGCGTAAAGGCGGACCGAGCCCTGAAGAACGCGGCCCGCGCCGCCAACATCGGAGTCGGCGGAGGCATCAAGCCGACCATTAAAATAGAAAGCATGCTGGACGGCAGCCCGGGCGGCGCGCGCTCGCCGCTGCCGTTCGGCTACTACGTGCCGCACGCACTCAAGCTGGAGGACGGCCCGCCGCCGCCGCCGGCGCACGCCGCGCACGCCGCGCACGCCGCGCACGCCGCGCACCACCCGCACCTGCAGCACGCGCTCTACGACGACGACTACCGCCGCGACCCCGCCGCCGACCGCCACGCCGTCGTCTCGCTCGGCAGCTGA
- Protein Sequence
- MRARVTPYTRAASERQRRPRVTACHRRAAAPRRPRLPCPRPANELEMAELFTEGRECVNCGAIRTPLWRRDGTGHYLCNACGLYYKMNGMNRPLKQPRRLVRQRHAALALAAPAHDMGTKRPGVQCTNCHTTTTSLWRRNAHGEAVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSVKADRALKNAARAANIGVGGGIKPTIKIESMLDGSPGGARSPLPFGYYVPHALKLEDGPPPPPAHAAHAAHAAHAAHHPHLQHALYDDDYRRDPAADRHAVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00251013;
- 90% Identity
- -
- 80% Identity
- -