Basic Information

Insect: Lomographa bimaculata
Gene Symbol: -
Assembly: GCA_948107665.1
Location: OX403589.1:14532654-14542982[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.047 3.2 8.8 1.1 3 23 650 671 649 671 0.90

2 24 2.5 1.7e+02 3.3 1.5 4 23 1024 1045 1022 1045 0.84

3 24 0.04 2.7 9.0 0.6 1 21 1050 1070 1050 1071 0.96

4 24 3.3 2.2e+02 3.0 0.1 3 23 1114 1135 1112 1135 0.90

5 24 0.00056 0.038 14.8 0.7 3 22 1146 1165 1146 1165 0.96

6 24 0.26 18 6.4 0.6 2 23 1173 1195 1172 1195 0.93

7 24 0.006 0.41 11.6 0.7 3 23 1216 1237 1214 1237 0.94

8 24 0.00075 0.051 14.4 0.5 1 23 1243 1266 1243 1266 0.95

9 24 0.13 8.9 7.4 0.0 1 23 1292 1315 1292 1315 0.90

10 24 0.0057 0.39 11.6 3.5 1 23 1320 1342 1320 1342 0.97

11 24 0.0092 0.63 11.0 0.2 1 23 1348 1371 1348 1371 0.95

12 24 0.0059 0.41 11.6 1.0 1 23 1384 1406 1384 1406 0.97

13 24 0.00018 0.013 16.3 1.8 1 23 1455 1478 1455 1478 0.97

14 24 0.0074 0.51 11.3 1.4 1 23 1536 1559 1536 1559 0.96

15 24 0.0021 0.14 13.0 1.5 2 23 1585 1607 1584 1607 0.95

16 24 0.09 6.2 7.9 0.1 2 23 1613 1635 1612 1635 0.93

17 24 0.0068 0.46 11.4 0.5 1 22 1678 1699 1678 1702 0.91

18 24 0.0013 0.087 13.7 0.6 1 23 1709 1731 1709 1731 0.93

19 24 0.00012 0.0079 17.0 0.3 2 23 1819 1841 1819 1841 0.93

20 24 7.9e-07 5.4e-05 23.8 1.3 3 23 1848 1868 1847 1868 0.98

21 24 0.011 0.76 10.7 0.7 1 23 1886 1908 1886 1909 0.94

22 24 0.22 15 6.7 0.0 1 23 1930 1952 1930 1952 0.98

23 24 0.029 2 9.4 0.6 1 23 1958 1981 1958 1981 0.95

24 24 0.00026 0.018 15.8 0.4 1 23 1989 2012 1989 2012 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.047	3.2	8.8	1.1	3	23	650	671	649	671	0.90
2	24	2.5	1.7e+02	3.3	1.5	4	23	1024	1045	1022	1045	0.84
3	24	0.04	2.7	9.0	0.6	1	21	1050	1070	1050	1071	0.96
4	24	3.3	2.2e+02	3.0	0.1	3	23	1114	1135	1112	1135	0.90
5	24	0.00056	0.038	14.8	0.7	3	22	1146	1165	1146	1165	0.96
6	24	0.26	18	6.4	0.6	2	23	1173	1195	1172	1195	0.93
7	24	0.006	0.41	11.6	0.7	3	23	1216	1237	1214	1237	0.94
8	24	0.00075	0.051	14.4	0.5	1	23	1243	1266	1243	1266	0.95
9	24	0.13	8.9	7.4	0.0	1	23	1292	1315	1292	1315	0.90
10	24	0.0057	0.39	11.6	3.5	1	23	1320	1342	1320	1342	0.97
11	24	0.0092	0.63	11.0	0.2	1	23	1348	1371	1348	1371	0.95
12	24	0.0059	0.41	11.6	1.0	1	23	1384	1406	1384	1406	0.97
13	24	0.00018	0.013	16.3	1.8	1	23	1455	1478	1455	1478	0.97
14	24	0.0074	0.51	11.3	1.4	1	23	1536	1559	1536	1559	0.96
15	24	0.0021	0.14	13.0	1.5	2	23	1585	1607	1584	1607	0.95
16	24	0.09	6.2	7.9	0.1	2	23	1613	1635	1612	1635	0.93
17	24	0.0068	0.46	11.4	0.5	1	22	1678	1699	1678	1702	0.91
18	24	0.0013	0.087	13.7	0.6	1	23	1709	1731	1709	1731	0.93
19	24	0.00012	0.0079	17.0	0.3	2	23	1819	1841	1819	1841	0.93
20	24	7.9e-07	5.4e-05	23.8	1.3	3	23	1848	1868	1847	1868	0.98
21	24	0.011	0.76	10.7	0.7	1	23	1886	1908	1886	1909	0.94
22	24	0.22	15	6.7	0.0	1	23	1930	1952	1930	1952	0.98
23	24	0.029	2	9.4	0.6	1	23	1958	1981	1958	1981	0.95
24	24	0.00026	0.018	15.8	0.4	1	23	1989	2012	1989	2012	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCGAGAATCAAGGATTGCGTGTCTGTTCAGATAACCGAAAATGACGAAATGCCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTATTCAAAACTGTGTGTGAAAAGACACAAAACAAACTACAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAACCATATTCTGATGAGGTTTATGATGATGGAGTGCATATTGATGGTTCATACCCAATCATTGAGAATGTCACCTCAACAAGCAAGCTGCAGCCCGAAGGCCCTCCTATCTTGGCTTCCTTGGGCCTCACACCAAGGAGTGATAAGACAAATGTGGATCCCCGAATGGACTGGCAGCGAGTCCATGCCATACTGGAATTGGTTCAAGAACATGATATCATTGATTCACTCCAGTCCACGGAAGAAAGTGACACGATCCACCATTCTGACCATGATTCCGAATCTGAAGGAGAATTAGAACCTGACTTGGATGATATTTACATCCGCTGTGATGGCGGTTACAAATGCAGGGATATGAAAATCTTAGCCAAAAATCCTCGAACATCAGAAACGGGACGGACTAAAGACGCCGATAAACTGAGAAAGCGTAAGGCTGTCGCCGTGAGGCATTGTCCTCGACCTAAAAACGCTTGGCAGCTACTGTTCACAGATGATCTACTCGAGCTCATTGTCACGTCGACCAATGAGAAAATGATCAGACACGGTAAAAGCTACTCGATGATCACTAGTGCTAAAGAAATAAGGACGCTAATCGGCGTTGTATATCTGCACGGAATAATGAGGCCGACCTTTCAGAACCACGCTGATCTATGGGACAGCAAGTGTGGTCTCCAATGTGTAAAAAAAGCCATAAGTTTCGAGCGTTTTAAATTCCTCCTTCAAAATCTGAGCTTTGATACCGAAAACGACGATACACTAATCCAGTTCGATACCATGAGACGTATACGGAAAGTGTTTGAGATATTCGCCATGAATTGCAGGACTGCGTTCGAATTGGAGACTGTCGCAGTCGTCGATGAGATCGTTGTCCCAGTTTACGGACCTTGTCCATTTAGATACGATATTGATAAGAAACCATTGAAACGCGGCATTAAAATGGTACTATTAATCGACCCGGCTACCTTCTACGTTAGCAACTTAGACGTGATAACCGATCCTTATTTCGGCGCCGAGGATATTGTCAAGAAAATCACAAATCATTTAGTTGGGACGGGAAGAACCATCGTAATGGACAGCTGGTACTTTTCCAAACAGTTAATGCACTCTCTTAAAACTAACGATCTCTACACAGTGGCAGCTTTACATCCCCGAAATGAAGAGATACCGCCTCTGTTTCAATCTCAGTACAGAAAAGTTCGTACATTCATGTCAGGATTTTTCAACGAAGAAGTCTCATTGACCTCATATGTCGATTCCAAGTCCAAGTCATTAACGGTTATAACAAATGAGCCGAAGTTCTACAAAAAAGGTCCTTCTATAAATCATGTAACTGCTGTGTCTGTGTACAAGAAAAATCAGTCAGCTGTGGAAGTACTGGATGTGCTTATGCATTACTACACAACTATGCAACATACAAATGACTGGACACTTTCATTGTTCTTCACCTTGTTGAATGTTGCTTCGGTCAACGCTCAGGGGGTGGAGAGCGAGAACAATGAGGAGGAAGAATACGAGGAAGAGGTGAGGGAGCCTCCTAGGCCTGTGAAGGTGCCTCATATGCCGGAAGTTTCCATCACAGTGATGCGGCCCACAGGAGAAACTCTTCATGCCCGTCAAGGTATCCAGCAGCTGGCGTCCAAAGATTGCCTCCTTTGCGGACGGACCTACCGATATTCCCACAACGCTCGTAGACACGAATTAGCTTCTCATAACTTCGACCGCTACACCAACAAAGTAACAAACAAGAAATCCCACTCGCGTATGACGCCCAAACTTCGACCGAACCCCTTCAACCCCAAAGCGCGGTTGATGCCCAACCCCATCAGCCATAAACTCCAATTCATGCCAAAAAGCATGCCCCCAAAAATAGTACCACACAAAATTATCAACCCACCGAAACCGATACCCATTAAAACACCTAAAATTCAACAGAATAACCTACCGTATCCCTTACGTATAAAAGCGCTCAAAGACTTGCAGATAAAGAAAAAAGAACCGCAAATCTTGAAGACTTTGCTCACTGCCAAACCTGAGGTGTTAGTTTCTGAACCAGAAATTATGAATTCTGGCCCGGAAAGCCCGGAGACGCTTATATCAGAGCCGGAGATCGCGTCCTTCCAGGTAGAAGCTATTCTCTCTGAGCCCACCGAATACGAACAAAATCAAGACGAAGAAATCGAAGAGCAGAGCAAAGAAAATCATAGTCAAAACTACGACACCGTTGATATGGAATCCGATCATGAGATCGAAATCGCTCGACAGCAGATACATGAAGACGAATTGTTGGAGGAAAATATTGGTGAAAACGATCACGAACCAGAAAAGCACATGGACGACGGTGAGAAACAAGGCGAGAGTGATAATGATGGAGATCAAGACATTCAAGACAATATGGATATAGACGAGAGTCAGGATGCTCTCGTGGATGATGAAGGCAAAGGAGATGATAATGAAGTTGAGAATGATGGCAATGAGAGTATCGAGCATGAGGTTAACCCAGAAGCAGAGGGAGAAAATGAAGACGAAGAAGACATAGTTCCAGCACCAGTTGTAGAACTAAATGAAGAATTGCAAAATCATTCTTCCAGCGAGTTGAATGAGGAAGATGAGGAAATGGATGAAACTGCGGAACTCAACGATACAGTTGATGGCGTCGAGTCTGAGCCTAAAGTCCTCGACCCTGACAAGCAGTATGTCACGAAAGCCCAAAGGGATTTCATCAATAAGTTCCGTAACGTCATCGAGCAAATCAACACAAAGAGATGTCTCTGCTGCGACAAAACTTACCCGCGCAGGAAGGCGGTTGTTCAGCATCTGCAGAAAAATGGACATAAGGTTCCCAAGCACACTTGCTACAACTGTGTAATAACCTTCTCTCACATAGGAGCTCTACTCAGTCACATGAGACAAAACGCTTGCACGGATCTATGGAAGATCATATATGATGAGAATGGCATTCCAGATGAGTTGGTACTCGAAGACGAACCTAAAGTTAAGATACAATCCAAAGATATTTTCAACGCTAGATCATATGGTTGCAAAATTTGTCCTGCCAAATTCCAATTGAAGCAATCAATCATGAAGCATGTACTAGATGTGCATGAAGATGGACAGTCGAATGTGCCTCTAGGCTGTGTTCACTGCGGAGTCAACTTCAAAGACAGGACCTCGCTCAAAAAGCATATTCGCGTCGGGGAGTGCACTGTCTATATTCATTGTGACCTTTGTACAGAACAATTTTCGAACATGCAAGACTTTACTGATCACGCGCTCTCGGTCCACGCCGATCATTTCGAGAAGCCTGATAATCATAACAAATACATAGACGGACGTGCCACGGACTGTTCTATCTGTGGCAAGAAAACTAGCAACTACCTAAGCCTGGTGAAACATTTGAAGTTCGTTCACAACGAAGACCGGCCGCATTACTGCCAAAATTGCGATGCTAAGTTCGAACAAGCGGCTGACCTTAATAAGCACATTTATGTGGAGCATTCAGACGCAGCGCTGGGTTTGCAGCCGCTCGAGCCAGATATGACCCTGGTAAAAGAGGAAGCTGAAGAGTATCACTATTCTTGCACTGAATGTAACGCGATATTTGAAACAGTCGACGCCTGGACCGATCATCAGGTCGCAGAACATAACCAGGTGGCTCATCATTGCGACCAGTGTGACAAAAAATTCTTGCGACCCTCGGAACTCGCCGAGCACAAAAACACCCATTTGAGAGTGAAGTTTTATCCCTGCAGTGTATGTCCCAATTCCTACAGCACTCCTCAAAAGCTATCCGATCATGTCCAACAATCTCATCCCAACGCGGGCAATAACGCCAACGCGGAAACAGAATTTTTCTGTGACATATGCATAAGAGGTTTCAAAAGCCGGCAGGCGTTCTCGAATCACATGCGTATACACGCTAAGGTGCCGACTACCAACAGAAAACCGGGTGAGCCGAAAGGATTCGATCCGCGCATTATCGGTAAGCCAATCAAACAATTCTCCATAGTTCAACCTGGTTTCGTCAACTTTAAGCCAAATATTAATGTTCCTAATGCGCCTTACTCCTGCGATATATGCGGTAAAGGCTTCATGCACAAGAAAAATATATGGAAGCACAAAAAAGTTTTGCACGCGGACATAATTAACGATAGAAACGATAGCGAGGAGAATACCATGCACGCTTCCACGGAAGACGACGATTACAATCCTGACGAGAACGGAGCACTCTCGACGCCGCAGTTCGACAGTTTCAACTTCTCAAACTTCAGTAATAACAGTTCGTCTAAGAAAGACAATCTACCTTACTCCTGTGAGTTGTGTTTTAAGCGATTCCCGATCAGGACTAGTCTGTGGAAGCACAAACGCGCCAAACACGGAATCGTGAACCCCGGTTCCAGCGGCAACAGTGAAACCTCGACCCAAGTGACCCCCGGGGAGACCGGTCGATCCAGTTGCACTATTTGTAAAATAACTTTCGCGGACAAGAAATCCTACTACCGTCACAGGAAGAACGTTCATAAAACTGCCACACAAATGTGCAAGATTTGCGGCAAGCCTCTCAACTCTACACTGGAACTGTACGAACATCTGAAAGCGGCTCACGCGCGGGAGCTACTGGGATACAACGCCAACCAGGGTTCGAGTAAAACTCAAGAACCGGCCCAGGAACTCGAGCCAGAGTATGACGAGCCGGAGCCCACCGATCCCAACGTGGACTTCCAGGCTCGTTACCCATGCGACACATGTGGAAAGCAGTTCGTGGGCCTGCTGGCGTTACAGAACCACCAGTGTATAAATCAGCATCCGCAGCAACCGCAGACGTTCGACTGCGAAATATGTCATAAAAGCTACACTTCCATCGCGGCCTTGAAGAGTCATCGAGGTTGGCATTTGCGCTCGCCAGATGGGAAAGCGGCTGCCAACAACAGCGGGCTCTGGATGCCCCAGCACAAAGTGACGAGTAAGGTCAGCAAGCACGAGGTAGTCGAGGCGGCAACGCCGACTCGTATCTCCGCGCCCGCCGCCGCCGTCACCGCCAAAAGGAGATTACCGCCCGAGGTCGAAGTTACCGTCGTCAATCCGAATAAAAAAATGCGCTCCGACGACTCCGTAGAATTGGATCAGCAGAACGCAGACGCAGTAGACGGCAGGTACTGCACGATCTGCGACAAAGAGTTCACGAAACGCGCCGCCTATCAGCGGCACATGGACGAGGTACATCAACCCAACTCCGTGTTCTGCCCGGTCTGTGACAGGAGTTTCACGAGGAAATCTACGCTTCTCGTGCATATGAAGAAGCACTACGAGAGCGGGGAGAGTAGCACGTCTGCGACGCCGTTGGACGACGAAGGTCACGCGTGTGACGTCTGTGGGGCGCAGTTTGATAGCGAGAAGGCGATGAGAGCTCACCAGGCGAGGCATCACGCGGAAGATTCTGGGGAATCTGACGACGATGGTAGCGCGCCAATCGCGCAACCCGGCGAGTTTACTTGCGGCCAATGCGGGGACGGCGTTGCCAGTCCGCGAGACTTGCTAGCACATCGATCGATGCACGCAACCCCTACTAAATTCTTCTGCAATATTTGCAAGGTCTACTTCGCCCGAGCGTTAGACCTGTCCTCTCACACGAGAGCGCGACACGCGGATAACGAAAAGGTCTTCTTCCCCTGTGCCATGTGTGACCGCTTCTACATGAACAAGAAGAGTTTACAGCGTCACATTGAAATGGCGCATTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASRIKDCVSVQITENDEMPTNVCRKCMDNVNNWHVFKTVCEKTQNKLQSLIKKDGSLLEEVKIKSEPYSDEVYDDGVHIDGSYPIIENVTSTSKLQPEGPPILASLGLTPRSDKTNVDPRMDWQRVHAILELVQEHDIIDSLQSTEESDTIHHSDHDSESEGELEPDLDDIYIRCDGGYKCRDMKILAKNPRTSETGRTKDADKLRKRKAVAVRHCPRPKNAWQLLFTDDLLELIVTSTNEKMIRHGKSYSMITSAKEIRTLIGVVYLHGIMRPTFQNHADLWDSKCGLQCVKKAISFERFKFLLQNLSFDTENDDTLIQFDTMRRIRKVFEIFAMNCRTAFELETVAVVDEIVVPVYGPCPFRYDIDKKPLKRGIKMVLLIDPATFYVSNLDVITDPYFGAEDIVKKITNHLVGTGRTIVMDSWYFSKQLMHSLKTNDLYTVAALHPRNEEIPPLFQSQYRKVRTFMSGFFNEEVSLTSYVDSKSKSLTVITNEPKFYKKGPSINHVTAVSVYKKNQSAVEVLDVLMHYYTTMQHTNDWTLSLFFTLLNVASVNAQGVESENNEEEEYEEEVREPPRPVKVPHMPEVSITVMRPTGETLHARQGIQQLASKDCLLCGRTYRYSHNARRHELASHNFDRYTNKVTNKKSHSRMTPKLRPNPFNPKARLMPNPISHKLQFMPKSMPPKIVPHKIINPPKPIPIKTPKIQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPTEYEQNQDEEIEEQSKENHSQNYDTVDMESDHEIEIARQQIHEDELLEENIGENDHEPEKHMDDGEKQGESDNDGDQDIQDNMDIDESQDALVDDEGKGDDNEVENDGNESIEHEVNPEAEGENEDEEDIVPAPVVELNEELQNHSSSELNEEDEEMDETAELNDTVDGVESEPKVLDPDKQYVTKAQRDFINKFRNVIEQINTKRCLCCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRQNACTDLWKIIYDENGIPDELVLEDEPKVKIQSKDIFNARSYGCKICPAKFQLKQSIMKHVLDVHEDGQSNVPLGCVHCGVNFKDRTSLKKHIRVGECTVYIHCDLCTEQFSNMQDFTDHALSVHADHFEKPDNHNKYIDGRATDCSICGKKTSNYLSLVKHLKFVHNEDRPHYCQNCDAKFEQAADLNKHIYVEHSDAALGLQPLEPDMTLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSDHVQQSHPNAGNNANAETEFFCDICIRGFKSRQAFSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFSIVQPGFVNFKPNINVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEDDDYNPDENGALSTPQFDSFNFSNFSNNSSSKKDNLPYSCELCFKRFPIRTSLWKHKRAKHGIVNPGSSGNSETSTQVTPGETGRSSCTICKITFADKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTQEPAQELEPEYDEPEPTDPNVDFQARYPCDTCGKQFVGLLALQNHQCINQHPQQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEAATPTRISAPAAAVTAKRRLPPEVEVTVVNPNKKMRSDDSVELDQQNADAVDGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYESGESSTSATPLDDEGHACDVCGAQFDSEKAMRAHQARHHAEDSGESDDDGSAPIAQPGEFTCGQCGDGVASPRDLLAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -