Basic Information

Insect: Lomographa bimaculata
Gene Symbol: -
Assembly: GCA_948107665.1
Location: OX403611.1:10068250-10083673[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.5e-17 2e-14 53.7 2.7 1 44 37 78 37 78 0.99

2 8 2.7e-17 3.5e-14 52.9 1.6 1 44 119 160 119 160 0.98

3 8 1.1e-14 1.4e-11 44.6 1.9 1 44 205 246 205 246 0.98

4 8 8.8e-10 1.1e-06 28.9 3.8 3 44 296 336 294 336 0.93

5 8 5.2e-14 6.7e-11 42.4 5.6 1 43 378 418 378 419 0.97

6 8 1.5e-14 1.9e-11 44.2 3.5 3 43 459 497 457 498 0.95

7 8 1.3e-08 1.7e-05 25.1 0.3 2 43 563 603 562 604 0.95

8 8 1.7e-09 2.2e-06 27.9 4.5 1 43 640 681 640 682 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.5e-17	2e-14	53.7	2.7	1	44	37	78	37	78	0.99
2	8	2.7e-17	3.5e-14	52.9	1.6	1	44	119	160	119	160	0.98
3	8	1.1e-14	1.4e-11	44.6	1.9	1	44	205	246	205	246	0.98
4	8	8.8e-10	1.1e-06	28.9	3.8	3	44	296	336	294	336	0.93
5	8	5.2e-14	6.7e-11	42.4	5.6	1	43	378	418	378	419	0.97
6	8	1.5e-14	1.9e-11	44.2	3.5	3	43	459	497	457	498	0.95
7	8	1.3e-08	1.7e-05	25.1	0.3	2	43	563	603	562	604	0.95
8	8	1.7e-09	2.2e-06	27.9	4.5	1	43	640	681	640	682	0.96

Sequence Information

Coding Sequence: ATGGATTTGGATAATGATAACAGTGATACTGATGCCGAATACGTTCCAGATAAAACAGATCTTCTTGAAAATGAAGATTGTAGCGAAAACGCAGCAACAAACAGAAGTTCTAAAGTATGGGAGCACTTTGAGAAAATCGACAACGCGCGGGCAGAATGCAATTACTGCCAAAAGCAGTTGTCGTATAAAACAACAACTAGTAACCTGAAGAAACATCTCGGGCATAGGCATCCGGACGTCCGCTCGATGCTCTGCGACCCTGCAGCGCCGACCACAGCTATCTCTGTCATAATGGATCCGACGTCGCCGGATGCATCCGATACCAGTTGCAAAGATGCAGAGACAAACAGAAGTTCTAAACTATGGGACCACTTTGAGAAACTTGATAACACAAGCGCTGAATGTAATTACTGTCAAAAGCAGTTGTCGTATAAAACAACAACAAGCAACCTGAAGAAACACCTCGGGTACAGGCATCCGGACGTTTGCTCGATGCTCTGCGACCCTGCTGCGCCGACCACAGGTGTATCAGTCATAATGCGTCCGGCGTCGCCGGATGCATCCGATACCAGTTGCGAAGAAAACACAGCACCGAACAGGAGCGCCAATGTAAGTGCGGCCTGGACACATTTCGATAAAATCGATAGTTGTATGGCCCAATGCAAGTACTGTCAAAGTCAGCTGTCATACAAGACGTCAGTTACTAACTTACTTAAACATATCCGCGCCAAACATCCGAGAGCTCTAGAGCTGGAGTTATTATACGAAACAGAAACACATACACAGAAAACAATGGATAGCCCAGTTTTGGCGCTGGAAGCATCTGATTCGAGGAGAGAAGGAAACACACCAACAAAACTTAAAAGCAAGAAAACCTTGAATGATATCTGGCAACACTATAAGAAGCTTGGAAACTTGATGGCCCAATGCAACTACTGTCAAAATCATAATATATCCTATAGGACTGGAATTAGCAGTTTGCAGAAACATATCCAGCGGAAGCACTCGAATGTTTTAGAAACATCTGAACTAGATAATATAAATATAACTGGAAATGGCAACTCAGATCCATTGTTAAATGCTTCTGATGATTCCAgtagCGAAGAAACCACCCCATACAGGAACACTGTGAGTGTTGCATGGAAACACTTCAAGAAGCTCGACAACTTCATGGCACAATGCAAGCATTGTCACAATCAACTGACGTTTAAAACGTCAGTGAGCAATCTTGTCAAACATGTCAAGCGGAAACACGCAGATGTATATGAACCATGTGAGCCAGAAGTTGCACATGAACCTAATGATACCTTGATCAAGTCACTGATTGAAGCTTCTCTTTCGAATTCGAGGAGCCAAGGAAGCAAGCCCAACATAATTTGGGCTCACTTTGAGAAAATGCCAAACTATTTCGCAAAATGTAACTACTGCAGAAAAAATCTCTCGTACAAAACATCAATATCCAACCTCAGGAAACATTTGAAGTACATACATTTGAAAGAAGCGCGACGCTCAGTTATGTATGATAACTCGGAAGACGGTACCTTCCGGCGCTCTCAACTTAATGAAAACGAGGTGGAAGTAGAACACTTGGAAGTTTTCGAAGCCGATGATATTTCCACGACTGATAGGAACAGCAGTGACAATGAAAAACCGTCTCGCGAGTCAGTATCAGAAAGGGATCGGGATGACGTTTGGAAGTTCTTTAATCTGTCAGACGACGACGCCAATAAAGCTAAATGTAAAATATGCAGCCAATTGGTGACCTGTAAATCTGATTCCAACTTAAAATACCATATCATTAAAGAACACGGAAAGATAGAATTCGCCGATGCTAAGAGTTCTGATGAAGAGAAAGAAGAACAATTAGAAAACAGGCGCGATATAAAGTTCGAGAAGCAGAAGCACCGAAAGCGTCGGAGCTCGATTTGGAAATACTTTGACATACAAGATCGCGCTACAAAAAAGGCAAAATGCAAGCTTTGCAACTGCACATTCATTTACACTTGCCTGTCGAACTTGAACAAGCATTTGGCGAGAACGCATGGTGTGATCGCAAACACGGAGGGAAATGAAATGGAGATAGTGTGA
Protein Sequence: MDLDNDNSDTDAEYVPDKTDLLENEDCSENAATNRSSKVWEHFEKIDNARAECNYCQKQLSYKTTTSNLKKHLGHRHPDVRSMLCDPAAPTTAISVIMDPTSPDASDTSCKDAETNRSSKLWDHFEKLDNTSAECNYCQKQLSYKTTTSNLKKHLGYRHPDVCSMLCDPAAPTTGVSVIMRPASPDASDTSCEENTAPNRSANVSAAWTHFDKIDSCMAQCKYCQSQLSYKTSVTNLLKHIRAKHPRALELELLYETETHTQKTMDSPVLALEASDSRREGNTPTKLKSKKTLNDIWQHYKKLGNLMAQCNYCQNHNISYRTGISSLQKHIQRKHSNVLETSELDNINITGNGNSDPLLNASDDSSSEETTPYRNTVSVAWKHFKKLDNFMAQCKHCHNQLTFKTSVSNLVKHVKRKHADVYEPCEPEVAHEPNDTLIKSLIEASLSNSRSQGSKPNIIWAHFEKMPNYFAKCNYCRKNLSYKTSISNLRKHLKYIHLKEARRSVMYDNSEDGTFRRSQLNENEVEVEHLEVFEADDISTTDRNSSDNEKPSRESVSERDRDDVWKFFNLSDDDANKAKCKICSQLVTCKSDSNLKYHIIKEHGKIEFADAKSSDEEKEEQLENRRDIKFEKQKHRKRRSSIWKYFDIQDRATKKAKCKLCNCTFIYTCLSNLNKHLARTHGVIANTEGNEMEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -