Lbim002891.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_948107665.1
- Location
- OX403587.1:15929727-15931934[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 2.3e+04 -5.0 4.6 91 115 38 53 10 110 0.52 2 3 5e-102 1.2e-97 326.5 6.5 1 217 212 420 212 421 0.93 3 3 0.35 8.1e+03 -3.2 2.1 38 118 624 705 619 718 0.51
Sequence Information
- Coding Sequence
- ATGGAGGGACCCACATCAGGACCTGTTATCCAACTTAAGGAAGATCAAGATGCAATATGCAGTAGTGAAAACGAAGAAACGCAATCTGTAAACATTGAAGAAGAGTGCGAAGCTTTAGTTAAAGACGATAAAAGTGATAGTGACGCTCATAGTGATGATCTTAGTCCTAATGATGAACAAAATATTGTAGTCAATAGTGGTATTTCTCAGTTTTATGAGAGCAGTGACAGTAAAGAAGATTATGCGGTAAAAATAGATGACAATGATACTCTTAGTGATATAGACGATATAAAAACTGACAGTGCTTCAGCAGATAGTGAGGATTCCGCGCTTGGTAGTCTTCCGCCGGATACTGGTGTCCCCGACAGAGAAGAAGAACCACAAGACCGATCAGAAGGAAGTGACTCTGGCATCGGATCAGAGACTTTGGACGATGTCAAGATACCGAGCTTCAATCTGGCACTGCCATGCACAAATAGCCTCAATATAACCAGTGCCGATAAAGTAAATGACATCTCTATTAACAGCAGTAATGACAAATGCCATACAACAGTTGAACAAGTTAAATCTCCTATGAGAAGTAATCTCAAAAGGAAAAGAAATAATGAAAATGATATTGAACCGGAAACAAAGAAAAGAAAAGAAGGAATCAAATTTGATAATGTCACAGTGTATTACTTTCCACGAGCTCAAGGGTTTTCGTGCGTGCCATCACAAGGTGGTTCCACTTTGGGAATGGAATGGGAACACTCACATATACAGAAATTTTCCTTAGCAGAACATGCTTTAGAACAAAGGAGATTACATAGACAAATATTACAACAGTTGAAAAGTGAGCGTCATTCTTTACAAGGCGCTTCACTTTCATCTAGCGAGGACAGTGACACCGAAGAAGAGACAAGTGACATTTCAGAATCTGAGCTAGATTTAGACAGTTACTATTTCTTGCAACCGGTACCTACGCGACAAAGAAGAGCTCTATTACGTGCAGCCGGAGTTAGAAAAATTGAAGGTTATGAGAAAGACGAATGCAGGGATATAAGATCTTCTCGCGAATTTTGTGGATGCGCCTGCAAAGGGGCATGCAATCCAGAAAGCTGTTCATGCAGCTTGGGAGGCATTAAATGTCAAGTGGATAGATTAAACTTCCCTTGTGGATGTACTAGAGACGGGTGCGCCAATACAACGGGGCGAATCGAATTCAATCCGGTGCGTGTCAGAACTCATTTTATTCATACGCTAATGAGAGTTGGCCTTGAGAGAAAAAACGAAGAAAATCGAGAAGCTGCCAAAAGACAATGGGCTGATGCACACAACGCTAATACAACCGCCTGTACCCCTAGCACATCTTTCGATAGAGAGAGGTGCCGGGTAAATCAAGACGACGGATTATTAAGAGATGTTAATCTGACTCCAAGGGTAGAAGTCGAATCCTGTGTGAACTCGGGCAATTTCAGTAACATCCACTGTGATATGAGCAATCCCACTCCACCTCAAGAAAACACAGCATATGTCTACAGAAATGAAAACTGCGATCGCATAAACACTATTGAAAGTAACATGCAATTTGATAATACGAATCACAATCACGCTGACCCATACACCTCGAGTATACTTCAAGGCAAAGGCCCACCTTACTCCGCTGCGAATGCAATGGGATACAATACAATGGCTAACAATATGCAGCAGTTCCCATGTGATCTCAACTATTCGTACGACCAACACACCGACCATCATTTCAAAGGTTTGCAAAGCTTTTCAGCAAGCAGTTTCGAAGAGTTTGCACACAGTTCACATATGTCGATGTTTAGCCATTACGGCCACATGTATGCGCCGGAATATTTACACAAACCGAGCACATCGATGCAAGACCATAGTTCTTTGCAGTACCATACCACACCTCAGAATCATTACGATATGTATAGGAGTCCGGAATGTGTAAATAATGAAGTCAGGGGAAATTATAGATCGATGATAACGATGCCATATCAGACTAGTAATAAGATGCAAACGATAGATAATGACGAGAACTGGTTCAGTCATAACACGCTCCTTAACTTGGACCATAACGACCAGACAACCCAAGATGCTGCTGAAGTGCAACCCCAGTCTAGTACCACAGAAGCCACCGAAAGTGCTAGCGTTGAGACTACGGAAAATTTCGGTGAACTTATCAAAAAAACTATGGTAGAATCTGTTACTGTGTAG
- Protein Sequence
- MEGPTSGPVIQLKEDQDAICSSENEETQSVNIEEECEALVKDDKSDSDAHSDDLSPNDEQNIVVNSGISQFYESSDSKEDYAVKIDDNDTLSDIDDIKTDSASADSEDSALGSLPPDTGVPDREEEPQDRSEGSDSGIGSETLDDVKIPSFNLALPCTNSLNITSADKVNDISINSSNDKCHTTVEQVKSPMRSNLKRKRNNENDIEPETKKRKEGIKFDNVTVYYFPRAQGFSCVPSQGGSTLGMEWEHSHIQKFSLAEHALEQRRLHRQILQQLKSERHSLQGASLSSSEDSDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRSSREFCGCACKGACNPESCSCSLGGIKCQVDRLNFPCGCTRDGCANTTGRIEFNPVRVRTHFIHTLMRVGLERKNEENREAAKRQWADAHNANTTACTPSTSFDRERCRVNQDDGLLRDVNLTPRVEVESCVNSGNFSNIHCDMSNPTPPQENTAYVYRNENCDRINTIESNMQFDNTNHNHADPYTSSILQGKGPPYSAANAMGYNTMANNMQQFPCDLNYSYDQHTDHHFKGLQSFSASSFEEFAHSSHMSMFSHYGHMYAPEYLHKPSTSMQDHSSLQYHTTPQNHYDMYRSPECVNNEVRGNYRSMITMPYQTSNKMQTIDNDENWFSHNTLLNLDHNDQTTQDAAEVQPQSSTTEATESASVETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01172389;
- 90% Identity
- -
- 80% Identity
- -