Lbim000517.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- CDC5L
- Assembly
- GCA_948107665.1
- Location
- OX403592.1:14670436-14687840[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-17 4.9e-14 52.5 1.8 2 46 9 54 8 54 0.97 2 2 4.6e-12 5.7e-09 36.3 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGGATTATGATCAAAGGCGGCGTTTGGCGCAATACCGAGgatgaaatccttaaagcggcggttatgaaatatggcaaaaaccagtggtcccgtatcgcttcactgctgcatcgcaagtctgctaagcaatgcaaggctcgttggtacgagtggctggatcccagcatcaagaagacggaatggtctcgagaagaggacgagaagttgctgcatttggcgaagctgatgcctacacaatggaggactatagctccaattattggtcgcacagcagcacaatgtttggagagatacgaatatttactAGATCAAGCCCAAAAAAAGGAGGAGGGGGACGATATGGGTGATGATCCACGCAAGCTGAAGCCTGGTGAAATTGACCCCAATCCCGAGACCAAACCTGCAAGGCCTGACCCCAAAGATATGGATGAAGACGaattggagatgctctctgaagctcgcgctcgtctcgcgaacactcaaggcaagaaggcgaagaggaaggctcgtgagaagcagctggaagaggctagacgtctcgcggcgctgcagaagcgtagggagttgagtgctgccggcatcgctgtgccttacaaACGCAAGAAGAAGCGCGGTGTGGACTACAACTCTGAGATCCCGTTCGAGAAGCGTCCGGCTGCTGGTTTCTATGACACCTCCACTGAAGTCGTGGATCCGATGGCGCCAGACTTCACCCGCCTCAGGCAGCAGCATCTGGATGGTGAACTGCTTTCTGAGAAGGAAGAGCGAGACCGTCGCAAGGATAAAAACAAGCTAAAACAACGGAAAGAGAATGACGTGCCGCAAGCAATGTTGCAAGGTGACCAGCCGGCGCGCAAACGAAGCAAGCTGGTGCTGCCGGAGCCACAAGTGTCGGATCAGgaattacaacaagtagtgaaactagggcgcgcgtcggaagcagcgcgcgaGTCCGCGGGCGGCGCGGGAGCGCCCACCGACGCCTTGCTCGCCGAGTACGCGCTCACCGCCACGCCCGCCACCGCGCTGCGGACGCCGGCGCAACAACAGGACAGAATTCTAATGGAAGCTCAGAATGTGATGGCTCTAACCCATGTGGACACACCTCTGAAAGGCGGTCTCAACACTCCGCTGCACCAGTCCGACTTCACGGGCGCATTGCCACAGTCACAAGCCGTCGCTACACCCAACACGGTTTTAGCTACACCTTTCAGGTCAAGTCGGACTGAGGTTTCAACTCCCGGTAGTTTCAACACGCCCAGTCATGGGACAGGACCACCGGGTTTGACCACACCTGGACTAAGGGATAAATTGAGTATAAATCCAGAAGACAGGGTAGGCGCTGGCGACACTCCTCAGCTGGCCAATCAAGTGCAGAAACAGCTAAAAGCGTCCGTCCGATCGGCGCTCCTTTCTCTACCAACGCCACGCAATGACTATGAAATAGTAGTTCCGGAACAAGATGGCGACGAAGGAGCGGACGCCAATGCGCACGCGCAGCTCGTGGAAGATCAGGCAGATGCAGACGCCAGGCTGGCGAAGGAGAGGGAGGACGAACGTATAGCCGCGTTACGTCTCCGATCACAAGCAGTCCAGCGCGGGTGCGCGCGGCCCTGCGACGTCAACGTGGGCGTCCTCCGCGGGACCGCCGGCGCACCGCTCAATGCGCTGCAACAAGCTGAAGAACTGCTGAAGGCAGAGATGGTCACCATGCTGCACTACGACGCACTGAGAGACCCGCCCGCAGGCGTAGACAAAAAACGCGCAGTCCAGCTCCAAGCGTCACACCTCgcgtacctagaacaacatccgtacgaggagttctcacaagaagagctagaagccgcgaagcaagagatgaaaaaggagatggaggtggtcaaagctggcatgtcgcacggggacctcagcatggacgcttacacgcaagtgtgggaggagtgtttggcgcagGTGCTCTTCTTACCCGGACAAAACAGATACACTCGAGCGAACCTCGCGAGTAAGAAGGACAGGTTGGAGTCCGCTGAGAAGCGGCTGGAACAGAATAGGAACCACATGGCGAAGGAAGCCAAGAAATGCTCAAAGATGGAGAAGAAATTGAGGGTGCTCACAGGTGGTTACCAAAGCAGAGCCGCGTCACTAATAAAACAGTTCCAAGAGTTACAAGACCAGATAGAGCAGTCAAACCTCGAGCTCTCCACCTTCAAGTTCTTAGCTGACCAAGAGAAGGCTGCCATTCCACGCAGGATAGAGTCATTAACAGAAGACGTGAACCGGCAAACAGATCGTGAGAAGGTTCTACAGAAACGTTACGCCGATCTGCAAGCGGAATTGGAAGACCTAACGAAGAGCAGGCATCCCAAGGACATAGACGAAAGGACTGGTGAATAG
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPYKRKKKRGVDYNSEIPFEKRPAAGFYDTSTEVVDPMAPDFTRLRQQHLDGELLSEKEERDRRKDKNKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVSDQELQQVVKLGRASEAARESAGGAGAPTDALLAEYALTATPATALRTPAQQQDRILMEAQNVMALTHVDTPLKGGLNTPLHQSDFTGALPQSQAVATPNTVLATPFRSSRTEVSTPGSFNTPSHGTGPPGLTTPGLRDKLSINPEDRVGAGDTPQLANQVQKQLKASVRSALLSLPTPRNDYEIVVPEQDGDEGADANAHAQLVEDQADADARLAKEREDERIAALRLRSQAVQRGCARPCDVNVGVLRGTAGAPLNALQQAEELLKAEMVTMLHYDALRDPPAGVDKKRAVQLQASHLAYLEQHPYEEFSQEELEAAKQEMKKEMEVVKAGMSHGDLSMDAYTQVWEECLAQVLFLPGQNRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKMEKKLRVLTGGYQSRAASLIKQFQELQDQIEQSNLELSTFKFLADQEKAAIPRRIESLTEDVNRQTDREKVLQKRYADLQAELEDLTKSRHPKDIDERTGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282289;
- 90% Identity
- iTF_00635365; iTF_00206022; iTF_00206945; iTF_00649962; iTF_00390321; iTF_00666483; iTF_00895891; iTF_00935682; iTF_00825685; iTF_00826918; iTF_00649046; iTF_01172311; iTF_00125080; iTF_00818296; iTF_00055366; iTF_00926555; iTF_00032862; iTF_00143018; iTF_00033754; iTF_00044448;
- 80% Identity
- -