Lbim019005.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- jarid2b
- Assembly
- GCA_948107665.1
- Location
- OX403600.1:11544829-11564467[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.57 1.1e+03 0.4 0.0 3 27 722 747 720 750 0.76 2 2 3.1e-15 6e-12 46.2 0.0 19 89 919 986 906 986 0.86
Sequence Information
- Coding Sequence
- ATGGGGAGAACAAAACTAGCAGTACGTGCTCAACGCAAGTTTGCACACAAGGTTTTCATCCCTAATGTGTCGGACACCAAATGTGATGTTCCGGTTGAAAAACGAGATCAAGAACCGCCTACACCAATACTAGTGAACAATCCAATATCTGTACATGATCTCCTTGATCAAGTCGCTTTCAGAAATATTCATGCCCACATTGATGAGAGAGAACCAGAACGCATTAAAGATGTAAGAATAGTTCTTAAGCGCCTCCCACCTATAAGAAATGGCATCACCAACAAACCAAATACAAACCAACCAGCAGAAGAGAATGCTTCAGAATCATCCCCACTTTCTAGTCCGGGTAAAAAACCTGAAGAAAACAAATGTAATTCTATCTCTGCCCGGCCATCCATTCCTGTTGCACATTCCTCACGTACTCCTCGAACACTACAAACTAAAAGTCGACAAACACTTAAGAAAGTATCATTAAGAGGACAAACGAAGGTTGTTACAAAATCAGGTGTTACTAAAAATATGAAGGCAATGAAACTTCGCAACAGAACAATATCACGAAAATTTATGAATACCAATCAAATTAAAAAAGTAATACAAACTAAAATACCTGTGGTAAACTTGCGCAAAGAGAGCTTGTCTCGTCGGACCAGTGAAACAAGCGTAGAAGACAACAGACCACTGATGTACTATGTAAGCAATAAAGTGAAAAAAGGAAGCGTGAGTAACCCAAAAAGTTCTCTGAACCCAGAAAGACAGAAACACACCAGGAATCTGAGTGTAAGGAAGGGGCTGATAGCTTTATCAACTAGAACATCACGCTCTTTAACTATCCCACCTGTTAAAAAAACCTCATTGACACAGAAAAAGTCTTCAACATACATCTTAGAAAAGAAATCTTTGGCTATAATCAAGAAAAAACCTGTAGTTGTGCAAAAAAAGGCTACAGAAAATATAGAAATCTCAAACAAATCACCAACAAAAACTAAAGAGCCCAAACTATTACTCAAACTAATTGATAAAATACCTGACAAAGTGGCTTCTAAGGCATCAGAGACCAGCTCTATTCGTCCATTAAATACTTTTCTTAAACGAGGGAGTGTGAAACCACAACCACAATTAAATGATGGCAGTGATGGAATCGGCTACAGTGATGTTGATTCCGAAATATCTGGTCTCACTGATAAAGCGGACGTAGCTCTAGAACGAGTTAAGCAATGGTTGGATAATGTGAGACCCGAGCCGCGCCTAATCGCACCTGAGCCCTGCCCTGTCGTACCGAAGTCCAGCCCTGCTACACCCAAGCCCAGTACTATAGTAACGAAATCCAACCCTGCCACACCCAAGCCCAGTACTGTTGGAACGAAATCCAGCCCTGCCACACCCAAGCCCAGTACTGTCGGAACGAAATCCAGCCCTGCCACACCCAAGTCCAATACTGTCATAACGAAATCCGGCCCTGCCTCACCCAAGCCCAGTAATGTCGCAACGAAATCCAGCCCTGTCACACCCAAGCCCAGTACTGTCGTAACGAAGTCTAGCCCTGCCATACCAAAGAACAGTACTATCGTAACAAAGTCCAAGCAGGAATCGACAGTTATTAAAAAAACTCAATCCAAACGAATATCACCTACACAGAAAGCTAATTCTAAGCCGGTTCAAGCTAATCTAAACTCGAATAAAAACGTCGAACCCGTAGTGTCCGGCATAGTCGAAACTCAACAAAAAACTGAATTTAAAGTACCGGAGGCGCCCCGTAAACGAACCGTCCGTCGATTACAGTCTGCGCCATCCACGAGTTCCCCTCGTCCGCAACTCTCGCCCAGGGAACGAAACTTGAGAAAGCGCTGCACTGCTTGGAATTACAAACGATTAGGTTGCTTGATAACTAAACCGGAGACCATTAGGCGCTTTTGCACAGAATGTACCCGCTGCAGATTGTTATTCAAGCCCGCTACGATCTCGAATGAAGGAACGTATCTGCATTCCGGTGCGTCGAGATCGAGATTTTCCTCAGACGTGTACGAGTTTGAAGAACGAGATGACGATAGTCGGAACATCGCTCCATATTGCGCCACCAGAGGGTCTAGGCCAGAAGAAAATCAGTCCACATCAGAAAATGATTCGAATTCGATACGCTCGGCTTTGTGGCTCATATCAACACAAAGCAACCATGTAGAAAAACTTAATGAATTTATGACGCGGAAAGGAAAGAAGTTCCTTCGAGCGACTAGTATAATAAACGGCAACTCGGATGGGGATCCGCCGAGGGATGATACCGTTCTCGCTCAAGTTATTGGCATATTGATGGAAACTGACACGGATGATAACGAGCCGACACAAAGTACTGAGCCGGAAGTTGAAGTTATAAGTAAGAGTAGTTTGGATGAACCAAAGCCTGGGTCGAGTCGCCATTTCAGCGCAGAGGGCGAGGTGCCGCGGAAGCGTACGCGGCACTCGAACCAGCATGCGCCTTCTGTTCAGCCCGAGTGTGCGGCTGTGCAAGTTTGCCGGAAATTTCGTCCTACCGAGAGTGAATTTACAGAGGGCCCTGCTAAATACGCCGCACAAATACTGCAAATGTACACTGGCATTGGCTTATGTGGAGTAATACCGCCATCGAATTTCAGTCCGTCATGCGTTATTAACAATATCGAGACTCCGTTCAAAATGAACAATCAGTATGTACATCGTATGTATCAGAGATGGGGGCCCGCGACGAAAGATCTGACTGTTATTCGATCTGTACAAGATGCAAAAGTCCAAGGATGTCCCCTGTTTGATGGCATAGAAGTGGATCTGGTAAAACTTCATAAGATTGTGCAAGAAGCAAATGGCATCGAGGCATTACAGACTGATAACCAAAAGTGGACTGCTATCATGCATAAATTAGGATTTCGCTCATCCACTAAACCCACCAAACTGCAAAGCATTTATTACAAATGCTTATTAGATTATGACATTCTCACTTGCGAGCAACTCGATAAACAGAACAACGAAGTAGACAAATGCTGGGCAAAACGCGAGGCGCAGGCAATAGCGCGGGCAAAGGATCCGCTCTGGCGGCAGAAGAAAATGAAAGCGGGAAAGTCGTTAGACGATGACGACGCACCCACGCATCTCGAGACAGTATGTGCTGAGGCGGAGGAATGCGTCGCACCAGGAAAGAACGGCACCATCAAATCATTCAAAAAGATCGCCAATCTAGTCCATGACATGTATTTCCCCACTCGCCCTAACCCGTCAATGAATGAAGTAGAACAGGAGTTCTGGGATATAGTGATGTCCGCGAATCCCCACGTGTGCGTACACTCCGCGTCCGTGGACACCTCCACGCACGACTGCGGGTTCACGGCGGACAAGAGCGAACCTTACTCCAACCATCCCTGGAATCTCAAGCGTTTGAGTACTAGCTCAACAAATTTGCTTAGCTACTTGGGACCGATGCCGGGAGTTTCTTCAACAACGCTCCATTTTGGAATGACTTTCACAACTAGCTGCTGGCATATGGATCCCACTGCCGTGCCATATATAGAGTACTTACACTCTGGTCCGCCGAAGATCTGGTACTCGATCTCAGCGGATCAGGCGGACGCATTCCGTACGGCCGCCGAGACTCTATGTCCCGCTGCCGTGCAGAATAAAGACATCTGGCTGCCCTGCGACATCCTGATGATCCCGCCTAATATTTTACAGCAGCAGGGTGTCAAAGTATCGCGTCACGTGCAGAACGCGGGCGAGTATGTGATTGTGTACCCGAAGTCGTACTGTGCTTGCATCGACACCGGCTACACAATCTCCGAAGGCGTATACTTCGCGCCTCACACCTGGCTCAACAACGCAGAGTCCATATACTTGAACCTTCGAAGTAGCTGCGAACCGAGTCTCTTTCCAATGGAGAAGCTCCTCATCTCCATGGCGACCATGCAGTACGACGCAGTTTTCCTGTTACAGCGGGTGCACACGATGTTGCAGTCAATGTTGCGCGCTGAGCTCGCCTATAGGCAGAAACTGGCCGGACGCAGCATAGAACTCATGTCGCCCGCAGAGCAGAACAGACGCGCGTCACGCGCCTCCTGGCAGCTTTACGAGAACGGGGAATGCGCCTATTGCCGCTGCCATTTGTACCTCTCTAGGGTAATCGGTCTGACTAAGGGCCAAACAGGCCTTTGCGCGATGCACGGCGTCCATCTATTCGAACAAACTGTAATGCGCGGGGAACAACTAACTGGCGTGTACTGCATCCTGCTATTCAGCAATGCCAAGATCAACTCCATCATGGACAATCTGCAGCAGAGGATTAGAAGGTTATGCTCGCCGACGCTGAAAGTCTGA
- Protein Sequence
- MGRTKLAVRAQRKFAHKVFIPNVSDTKCDVPVEKRDQEPPTPILVNNPISVHDLLDQVAFRNIHAHIDEREPERIKDVRIVLKRLPPIRNGITNKPNTNQPAEENASESSPLSSPGKKPEENKCNSISARPSIPVAHSSRTPRTLQTKSRQTLKKVSLRGQTKVVTKSGVTKNMKAMKLRNRTISRKFMNTNQIKKVIQTKIPVVNLRKESLSRRTSETSVEDNRPLMYYVSNKVKKGSVSNPKSSLNPERQKHTRNLSVRKGLIALSTRTSRSLTIPPVKKTSLTQKKSSTYILEKKSLAIIKKKPVVVQKKATENIEISNKSPTKTKEPKLLLKLIDKIPDKVASKASETSSIRPLNTFLKRGSVKPQPQLNDGSDGIGYSDVDSEISGLTDKADVALERVKQWLDNVRPEPRLIAPEPCPVVPKSSPATPKPSTIVTKSNPATPKPSTVGTKSSPATPKPSTVGTKSSPATPKSNTVITKSGPASPKPSNVATKSSPVTPKPSTVVTKSSPAIPKNSTIVTKSKQESTVIKKTQSKRISPTQKANSKPVQANLNSNKNVEPVVSGIVETQQKTEFKVPEAPRKRTVRRLQSAPSTSSPRPQLSPRERNLRKRCTAWNYKRLGCLITKPETIRRFCTECTRCRLLFKPATISNEGTYLHSGASRSRFSSDVYEFEERDDDSRNIAPYCATRGSRPEENQSTSENDSNSIRSALWLISTQSNHVEKLNEFMTRKGKKFLRATSIINGNSDGDPPRDDTVLAQVIGILMETDTDDNEPTQSTEPEVEVISKSSLDEPKPGSSRHFSAEGEVPRKRTRHSNQHAPSVQPECAAVQVCRKFRPTESEFTEGPAKYAAQILQMYTGIGLCGVIPPSNFSPSCVINNIETPFKMNNQYVHRMYQRWGPATKDLTVIRSVQDAKVQGCPLFDGIEVDLVKLHKIVQEANGIEALQTDNQKWTAIMHKLGFRSSTKPTKLQSIYYKCLLDYDILTCEQLDKQNNEVDKCWAKREAQAIARAKDPLWRQKKMKAGKSLDDDDAPTHLETVCAEAEECVAPGKNGTIKSFKKIANLVHDMYFPTRPNPSMNEVEQEFWDIVMSANPHVCVHSASVDTSTHDCGFTADKSEPYSNHPWNLKRLSTSSTNLLSYLGPMPGVSSTTLHFGMTFTTSCWHMDPTAVPYIEYLHSGPPKIWYSISADQADAFRTAAETLCPAAVQNKDIWLPCDILMIPPNILQQQGVKVSRHVQNAGEYVIVYPKSYCACIDTGYTISEGVYFAPHTWLNNAESIYLNLRSSCEPSLFPMEKLLISMATMQYDAVFLLQRVHTMLQSMLRAELAYRQKLAGRSIELMSPAEQNRRASRASWQLYENGECAYCRCHLYLSRVIGLTKGQTGLCAMHGVHLFEQTVMRGEQLTGVYCILLFSNAKINSIMDNLQQRIRRLCSPTLKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -