Lbim023268.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- XBP1
- Assembly
- GCA_948107665.1
- Location
- OX403589.1:17524748-17527019[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-17 3.5e-14 52.9 8.1 2 52 40 90 40 92 0.97 2 2 5.3e-05 0.051 13.9 0.8 33 55 85 107 84 112 0.91
Sequence Information
- Coding Sequence
- ATGAGTGCTCCAATAATCATCACGGTGCCCAACAACTACCTGATAGAGGAGGAGGGCGATGTGGTGGTAGATGTGCCACCACCATCCCGGAAGCGGAGGCTGGACCACCTCACGTGGGAAGAGAAAATGCAAAGAAAGAAGTTGAAGAACCGCGTCGCAGCGCAAACTTCGCGCGACCGGAAGAAGGCCAAAATGGACGAGATGGATTACCGCATCAAGAACCTCGAGGATAAAAACGATAGACTCGTGAGTGAGGTTGAGAGCTTGAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCGTCGCTACGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGAGCCCCCGGACCAGCAGAGTCCCCTCAGCAGAAGGACGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGACGATGTGTCTTCTCTCACAGACCTCCTCGCACAGTTCGACTCTGAAGAGTACCTCGACACCCTCCAACAACTTGCAAACTCCCTCCTCGAAGAAATTGATGCAAGTTCTGCAGGAGCGGCTAAAAATAACACAGAGAGGCAAACTAGAGAATGCCCTCAAGGAGATAAAGTGGTGGGGACCGCAGCAGAGCACTTGGAATCCGGTGGAAGTGCAGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLIEEEGDVVVDVPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDYRIKNLEDKNDRLVSEVESLKALNERLLSENASLRSEAAARTVAGAPGPAESPQQKDGPPTAIRAARLLLTMCLLSQTSSHSSTLKSTSTPSNNLQTPSSKKLMQVLQERLKITQRGKLENALKEIKWWGPQQSTWNPVEVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- -
- 80% Identity
- -