Lmig003913.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- -
- Assembly
- GCA_026315105.1
- Location
- scaffold172024:4452-199940[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-11 2.4e-07 30.5 3.4 1 35 254 288 254 289 0.97
Sequence Information
- Coding Sequence
- ATGGCTTCAACCCAGGGAGAGATAAGAGTGGGACCTTCACATCAGGCCCGATTACCTGAGTATCGGCCAGCGTTGCTGTCAACTTCTGATATTGCAGAGCAGCCTTCAGATCCTGAATGGGAAAAAGAACGTGAAGATTTGCGTTGGGTGCCTTCCATGACACTTGACACAGATTTGCTTATGTATTTGAGGGCAGCGAGATCAATGGCAGCATTTGCTGGTATGTGTGATGGTGGTTCACCAGATGATGGATGTGTTGCTGCAAGCAGAGATGACACAACAATAAATGCTTTGGATGTGTTACACGACTCTGGTTACGACCCAGGAAAAGCGCTGCAAGCATTGGTTAAATGTCCTGTTCCTAAGGGCATTGATAAGAAATGGTCAGAAGAAGAAACGAAACGGTTTGTAAAAGGGCTACGTCAGTTTGGAAAAAATTTCTTTAGGATTCGGAAGGATCTTCTACCTCATAAGGACACTCCTGAGTTGGTGGAATTTTACTATTTGTGGAAAAAAACACCAGGGGCTAACAACAATCGACCTCATCGACGTAACCGCAGGCAGGGTTCTCTTCGGCGAATTCGAAATACAAGAAATGCTAGAGGGCAACCTAAAGAAACAGATGCAAGCTCTCCTGCAACCGTGGGTGCATCAAGGCCATCACCACAAACTCCAAAGGAAAATGGTGAAGCTAGTTCTGCAACTGATGAGGAGAATACAGAAGAAGATTCAGACTCTAGAGACAATGCAGCATACCGTTGTCAGCACTGCTTCACTACAAATTCTCGAGATTGGCAACAAGGTGGAAAGGATCGGATATTACTCTGTTCAGAGTGTCGATCATACAACAAAAAATATGGTGAACTACCTCCTGTTAGCAACACGACTCAACCTGCAAATCAGGGGAATATTAGAGGAGAAACACCTTATTTGTTCAGACCCGTGCAGTCAGAGGGGCTAGATGATTCTCCTGGTAGAATGAGGACACGGACTAGAGCAAAGGAGCAGTCAAAACCAGAAACCCCAACAAAAGGGAAAAAACGGTCAACAGTTGAGATTGAGAATGAAGAAGAGAAGGAAGTTTCATTATTTAAGCGCAAACGAAATGATAGGGCAGATAGTCCTGCAGAGAGTTTGACAACAGATAGTGGATCATTAGTAGATGATGGAGAAAATAATGAACAAGAAAGTGAAGCTGCAGAGCCCATTACAGGGAGTGTTACAATCATGTCCACAGGAAATGCAAAAGGAATAACAGATGTAATACGTCCTCTGGCAAGTGCAAACAGCCCGAAAGTACCAGAGTCCCCATCATTGAGCACAAACTCAGATAAAATTGACTGCTCAGGAGTACCTAGTATCACAGCTAATCCTGGACTTTGTTCACCAGGACAGGTTACAAGCTCTGTTGTAATTGTTAACAGTGCTAATGCAAGCAGTGTTCCATCTGTAATGAATGTTCCTCTTCCATTAAGCCAAACTGGTCCAGCGACAGGGAGGAGTTCAAGTCACCAACATCATCAGAACTCTCACCACACAAAATCGAGTTCTGGAACTTCTCATCATCATACTGGGCAAAGTGGTTTAGTAGTACAGCCTATACTACCACCATCACTTGCGCATCACCATGTTGCATTGGGAGGAGTTCCACCAACTGCTGGTCCTACATCTTCATTGGAAGCACTGAGGGCTCATGCCCAGGCTGCAGCCAGTATGCAGCAGCAGTCGCAGCCAGTTCAACAGGGATCTCTTGCTTTTGGGATGATTCGTCCTTCGTCTCATTCTCCATTGCAACAAACGGTGTGGTTAATGCTGCCAGCTGCGGAGTCAGGGTTGCCAGGATCACACCATCACACCCCTCGGCATATTGTAGGTATACCGGATGATCTCAAGCCTGAAACATTAAGTGAAATGGATTCACAAATAACACCCTCACAACAACCAGAAGAAGATGAAATTCCGAGCCCAAACCATGTCCCACGAGGCCCAAGCCCAGAACCAAAGATAGAAGATACAGAATGTCATCGCAGCCAGAGTGCCATATTTCTGCGGCACTGGAACAGAGGTGATTTCAATTCCTGTGCAAGGACTGATCTCACATTTAAGCCAGTTCCTGATTCTAAATTAGCTCGTAAGAGAGAAGAACGGCTTCGAAAACAAGCTGAACGAGAAAGAGAAGAAAGAGAAAAGGCTGCACTGCAAGCACAAACGAGGAAAATCACAACACCAGAAAAATCTGAGGGCCCAAAGCCTCCATCCCGGGGCCCCATGGAGACTATAACCTCTCCATATGAGCGTTTTACGCCAAGACAAGGGTATCCTGACACACCAGCATTAAGACAGCTAAGTGAATATGCCAGACCTCATGCAGGCTTTTCACCTGGAACATTACCACGGTCGTCAGGATTGTCGTTGCCACCTCAGTGTATTGATCCAATGCTTCATTATCAACTAAACAGCATGTATGCGCCTGGAACTCGTGAAAGGTTGGAGATAGAACACTTTGAGAGGGAGAAAAGGGAGAGGGAGCTAGAACAATTTGAGAGAGAAAAGAGAGAGAGAGAGATACGTGAGCTTCGGGAACGGGAGTTGACTGACCGCTTGAAAGATGAGATGCTGAAGGCAGCTGGTCCTGGACCACGACCAATTGAACCTCACTGGGCTGATTTGCACAGAAGATATGTCGGATTTGGACCCAGTGATCGGCCACAGGGAGCTCTGCATCAATTTGGGCTGTACCCATCAGCACCAGCTGCAGGACAGACAGCATTAGGGCAGCTGGAGCGGGAACGTCTGGAGCGTCTAGGAATACCGGCTGCCGGTCACGGACCTGCGGCTGGTCCTCACACTCACCCCCACCCTAGTTCTTTGGCAGCAGCCCAACTGGAAGCTGCTGAACGGTTGGCACTGGCCACTGATCCTATGGTGCGCCTACAAATGGCTGGCATTTCAGCAGAATACCATGCTCACACCCATGCACATACTCATGCTCATTCCCACACACATTTACATCTTCACCCAAGCCAACAAGCTCAGCAAGCACAGGCACAGCAAGAAGTTGCAACAGCAGGATCAGCTGCTTTCCCATTACCAGCATCAGCATCAGGCTATCCAAGACCTGCTCTTTTACCTCCAAGAGAGGCAGCCCTTGGGTTGCATCACCCTTCTGATTTATTGACACGTGGCCCAGGTTATGCTGATCAGTTGGCTCATCAG
- Protein Sequence
- QLPFVFAVAIASVAATLPSYVTVCPKNDPQLNECFVNSLNKMRPRLIKGISELGVPALDPLELPEVKVAQSFGDWTKVLLKNVKIRGAGEFNISRLKINLEAKEFSGLIFIPNLTYEGDYNLEANFMNLSMKGKGSIKGNATECYGHFELRSDLENRNGENNFKFNEIIINLKVNRGIASISGLVNGQVEIGDAVDDEDLWLFVKPIIEETMLEVVLEMVNNIAKQVNIDEVFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00912828;
- 90% Identity
- iTF_00912828;
- 80% Identity
- iTF_00912828;