Lmig012481.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- Cacna2d3_1
- Assembly
- GCA_026315105.1
- Location
- scaffold133957:221563-257981[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-19 3.5e-15 55.6 4.4 1 35 57 90 57 91 0.98 2 2 0.43 3.1e+03 -1.9 0.1 6 15 111 120 105 128 0.63
Sequence Information
- Coding Sequence
- ATGACAGGCGATCGTCGAAAACAGAGTTTTCCCACACGAGCTATTGCTGAAGACTGGGGAGGAACACATCATCCTCCTGACTTTACTGGTAACAATCCGTGGTGCAATCTGTCACCAGCAGCAAGATCAGGCAGGCAACAACTGGCAGCACGGCGAGTGGACTTATCATGTACTAATTGTGGTACTATGACAACTACCATTTGGCGACGCAATCCAGAAGGTGAAATGGTTTGCAATGCATGTGGTTTGTATTACAAGCTACATGGAGTGAATAGGCCAGTTACAATGCGGAGAGATACAATACATACACGGCGTCGAAGGCCAAAAGGGGACAAGAATTCTCCAAATCTTCGCCATCGCTCAAAAGCAGCCAATGGGAATCCAAATGTAGAGGATCCCGCAGACATGTTGGCAGCTTTACGTCGACAAATCCAACCACATCTAATGTTGGCGCTGCAGGCGGCGCCAGGACTTCCTCCACATTCACAGGGACATCCGCCTCATGTTCCTTCTTCACTGTCAGTTGTCAAGTCGGAGCAGGATTCTGTACCTGCTGGAGGCTCTGACAATGAGTCTGAAGAACATGATAGGTCAGGTGAAAATGATCTTTCTGACCTACCTCTCAATTTGGTGGCAACCAGCTTAGCTGATTGA
- Protein Sequence
- CGRMCAGSVVVGALAAVVAAAVVAGSPDVINIEPHLFKSLADKLGAELWEVGSYVSRRQEIQDAYNKESGEVRAVDGEKLLEKIADNIRNMTESKISAIKRIMDTAENTAMAHQDDEVTEFPYYNAKNLSKPDEPLPEGFREVILTQDKHFYNMEVNTSFSAVHVPTNVYDKAPDLLRAVKWSDKLDSIFISNYEMDPSLSWQYFGSSLGFMRLYPAVKWTPKPAELEVDLYDCRTRQWYIEAAASPKDIVILVDSSGSMTGVRREIARQVVTDILDTLGINDYVNVFNFSEHITEVVPCYSNHLVQATLHNIRELKRGMEELHTDKIANFSAVLMHAFELLQSYRESTSGAHCNQAIMLITDGAPYNYKDIFELYNWHKQPDGEVQIPVRVFTYLIGREVADVREVNWMACANKGYYQHLSTLAEVREKVLMYIQVMARPLVLGRTVHPTVWTPVYADVTDPKTTDWLWEKRECRKQKEIFLASREYNSNKSEEHLRQYVESLKRVTDENADETSYQLMTSVAVPVYDRRENATKIADLLGVAGTDVPIQEIKDLMLPHLLGVNAYAFMVTNNGHILTHPDHRPAFQGILKPNYNSVDMTEVELENNDREARDFSPNLLELRENIINQKTGSEVLSVKYHYDGMKRASVDRRHYYYCPIENTPFSLVLAIPERQKVLIAQKELRRAWSIGERVRKYFSGNNWKLHPNWAYCRYHYETEHTMNSPEEQFMHFLNRTQGKWQWLDKRTVTPPEHVASPNTPAGKTDKLAKDSYYCDRDLFQALVFDAMATESFQQNLSSLHKDDKGKQFQQRFGVTLAFVATRSGLTRWDDIAGPQNSSQPHFSEIHNHAIDEVWYKRAVEQHYENSKSFVYSVPFDAGEKNGSLVTASHAIFHSKDRASAPAAVVGFQFQHSALSTLFRNITYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -