Basic Information

Gene Symbol
Cacna2d3_1
Assembly
GCA_026315105.1
Location
scaffold133957:221563-257981[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-19 3.5e-15 55.6 4.4 1 35 57 90 57 91 0.98
2 2 0.43 3.1e+03 -1.9 0.1 6 15 111 120 105 128 0.63

Sequence Information

Coding Sequence
ATGACAGGCGATCGTCGAAAACAGAGTTTTCCCACACGAGCTATTGCTGAAGACTGGGGAGGAACACATCATCCTCCTGACTTTACTGGTAACAATCCGTGGTGCAATCTGTCACCAGCAGCAAGATCAGGCAGGCAACAACTGGCAGCACGGCGAGTGGACTTATCATGTACTAATTGTGGTACTATGACAACTACCATTTGGCGACGCAATCCAGAAGGTGAAATGGTTTGCAATGCATGTGGTTTGTATTACAAGCTACATGGAGTGAATAGGCCAGTTACAATGCGGAGAGATACAATACATACACGGCGTCGAAGGCCAAAAGGGGACAAGAATTCTCCAAATCTTCGCCATCGCTCAAAAGCAGCCAATGGGAATCCAAATGTAGAGGATCCCGCAGACATGTTGGCAGCTTTACGTCGACAAATCCAACCACATCTAATGTTGGCGCTGCAGGCGGCGCCAGGACTTCCTCCACATTCACAGGGACATCCGCCTCATGTTCCTTCTTCACTGTCAGTTGTCAAGTCGGAGCAGGATTCTGTACCTGCTGGAGGCTCTGACAATGAGTCTGAAGAACATGATAGGTCAGGTGAAAATGATCTTTCTGACCTACCTCTCAATTTGGTGGCAACCAGCTTAGCTGATTGA
Protein Sequence
CGRMCAGSVVVGALAAVVAAAVVAGSPDVINIEPHLFKSLADKLGAELWEVGSYVSRRQEIQDAYNKESGEVRAVDGEKLLEKIADNIRNMTESKISAIKRIMDTAENTAMAHQDDEVTEFPYYNAKNLSKPDEPLPEGFREVILTQDKHFYNMEVNTSFSAVHVPTNVYDKAPDLLRAVKWSDKLDSIFISNYEMDPSLSWQYFGSSLGFMRLYPAVKWTPKPAELEVDLYDCRTRQWYIEAAASPKDIVILVDSSGSMTGVRREIARQVVTDILDTLGINDYVNVFNFSEHITEVVPCYSNHLVQATLHNIRELKRGMEELHTDKIANFSAVLMHAFELLQSYRESTSGAHCNQAIMLITDGAPYNYKDIFELYNWHKQPDGEVQIPVRVFTYLIGREVADVREVNWMACANKGYYQHLSTLAEVREKVLMYIQVMARPLVLGRTVHPTVWTPVYADVTDPKTTDWLWEKRECRKQKEIFLASREYNSNKSEEHLRQYVESLKRVTDENADETSYQLMTSVAVPVYDRRENATKIADLLGVAGTDVPIQEIKDLMLPHLLGVNAYAFMVTNNGHILTHPDHRPAFQGILKPNYNSVDMTEVELENNDREARDFSPNLLELRENIINQKTGSEVLSVKYHYDGMKRASVDRRHYYYCPIENTPFSLVLAIPERQKVLIAQKELRRAWSIGERVRKYFSGNNWKLHPNWAYCRYHYETEHTMNSPEEQFMHFLNRTQGKWQWLDKRTVTPPEHVASPNTPAGKTDKLAKDSYYCDRDLFQALVFDAMATESFQQNLSSLHKDDKGKQFQQRFGVTLAFVATRSGLTRWDDIAGPQNSSQPHFSEIHNHAIDEVWYKRAVEQHYENSKSFVYSVPFDAGEKNGSLVTASHAIFHSKDRASAPAAVVGFQFQHSALSTLFRNITYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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