Basic Information

Insect: Locusta migratoria
Gene Symbol: BRAP
Assembly: GCA_026315105.1
Location: scaffold149796:132926-405546[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1e-06 0.00011 22.7 1.9 1 23 1291 1313 1291 1313 0.97

2 10 9.5e-07 0.0001 22.8 2.8 1 23 1319 1341 1319 1341 0.98

3 10 2.8e-07 3e-05 24.5 0.4 1 23 1347 1369 1347 1369 0.99

4 10 1.7e-05 0.0018 18.8 1.6 1 23 1375 1397 1375 1397 0.98

5 10 1.5e-07 1.6e-05 25.3 0.6 1 23 1406 1428 1406 1428 0.98

6 10 4.3e-07 4.6e-05 23.9 2.6 1 23 1434 1456 1434 1456 0.98

7 10 1.8e-05 0.0019 18.8 0.2 1 23 1462 1484 1462 1484 0.98

8 10 8.1e-06 0.00086 19.9 8.2 1 23 1490 1512 1490 1512 0.98

9 10 2.8e-07 2.9e-05 24.5 0.3 1 23 1517 1539 1517 1539 0.99

10 10 0.022 2.4 9.1 3.6 2 23 1546 1568 1545 1568 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1e-06	0.00011	22.7	1.9	1	23	1291	1313	1291	1313	0.97
2	10	9.5e-07	0.0001	22.8	2.8	1	23	1319	1341	1319	1341	0.98
3	10	2.8e-07	3e-05	24.5	0.4	1	23	1347	1369	1347	1369	0.99
4	10	1.7e-05	0.0018	18.8	1.6	1	23	1375	1397	1375	1397	0.98
5	10	1.5e-07	1.6e-05	25.3	0.6	1	23	1406	1428	1406	1428	0.98
6	10	4.3e-07	4.6e-05	23.9	2.6	1	23	1434	1456	1434	1456	0.98
7	10	1.8e-05	0.0019	18.8	0.2	1	23	1462	1484	1462	1484	0.98
8	10	8.1e-06	0.00086	19.9	8.2	1	23	1490	1512	1490	1512	0.98
9	10	2.8e-07	2.9e-05	24.5	0.3	1	23	1517	1539	1517	1539	0.99
10	10	0.022	2.4	9.1	3.6	2	23	1546	1568	1545	1568	0.96

Sequence Information

Coding Sequence: ATGGGGAAGAAAAAGAAAGGTGGTATTAAACCACCGATGGCATTGAAAACACCAGGAATTAAGCCCAATAACCCTAATACCAGCAATGTAAAGAACATGGCGCCTTCACAGAAAAAAAGGATGACAATGCAATCAAGAAACACAGTAGCTTCAGTACAAAACACTAATGCGCCTTATGTACCACTGCCTGGCACAAATATATACGTACCGAGGTCAGGAGGCTACGTACATCCAAGTCAGATTATGCACCCAAATTGGTCTGTTAATCAGTGGTGGCCTGGCACAGACATGTATACCAACCAGTTACCACAGCAACCCCAATACAAAATAAAACCAAAGAAGAAAAAGCAGAAGCAGGCAACTGCGATCAAGAAGTCTGGCGCAAATATAAATACAAACCAGCAACCGGAACAACCGCAGACCACAAATGTGAATCAAAAGCAGCTACCAGAGCAATTGCAAAGCAAGATAAATCCACAGAACAAAAACCAGAATCAGCCTACTGCGAGTAATATTCAGAAGCCAAACGCAAATGTAAACACAAACCAGCAAACAACGCAATCACAGTGCGCTAATGTAAATAAAAACCAGCTACCAATGCAATCGCAAAACGAGATAAACCCACAGAACAAAAATCAGAATCAGCCAACTGCGAGTAATACTCAGAGGCCTGGCCCGAATGTAAACGCAAACCAGCAACCAGCGCAATCGCAGTGCACTAATTTAAATAAAAACCAGCTACCACAGCAATCACAAAACAAGACAAATCCACAGAACCAAAACCAGAATCAGCCAAATGTGAATAATATTCAAAAGCCTGGCCCAAACATAAATACCAAACAGTTATCAGTGCAACCGCAATACAAGATAAAGCCAAAGAAGAAGAAGAAAAAGAAAAAGAAGAAGCCGAAGCAGCAGACGGTGGGTAATGTTCAGAGGCCTGGAACAAAAGCAAATGCAAAGCCGCTACCAGTGCAATCGCAAAGCAATGTAACTCCAAACAGCAAACCACAACAGACTGCCAGTAATATTCAGAAGCCCGTAATAAACGTAAATACAAAGCAGGTACCAGTGCAGCCACAGAGCAAAGTAACTGCGATCAACAAAACACAGCATCAGTCGACTGGGATTAATACACAGAGGCCAGTCACAAATGTAAATAATAAGCAGCAACCGGCGCAGTCAAATTGCAACCGAACTCCAGACAACAAAACGCAGCCAACTGGGAGCAGTATTCAGCAGCAGGCTTCAAAGTCGGATCACACACCGGGCTTGCAGAGTCAATGTTCAGCAGCAATTGTTACTAGCACATCTGGAGGAACAGAAAGCTCAGCAGCCTCAAAGCAAATGGAAGAAGTGGACCTTATGGATGACATAATAGAGATCCCGTATGTAAAGGAAGTGATAGAGGTGGATCTTACAAAGGATGACATCGAAGTGGAAAGTATGAAGGAAGTGACAGATGTGGACAGTACAAATGCTGCTCACTTACTTACTGCGCAGCCAGATATTCTGTCAGATAAATCCCCCAACGTCTGGCATAAAGTTATAGTTAAGTCAGCTGTGGTTGACAGAGTAGCTGTTCTCAATGCTATCAACAAGCAAATTTCTCCAGAGAAACTCAACCCATATTTTTTTCAAATGGAGGATGGACATATAACATTCCTAGTGAATAATTGCAGTGCTTCCCTCTCAACATTGTTCAAACGGAACCTTAAAGTGCCATTTTCACCTACTCAGATTGAATTGAAAGTCCAGCTTCATGCCAAGAAGGTGAGCCTCTCTGAAATTCTGCACAAAGTTGTCAGTGGAAGGATCAATCTTGAGAGGACGTTTTTAGACCTGTCAAATCTGGCTAGCATTCCTGAAATACAGGAAGTGCTGTACCACCCATCAGTCACCTCCCATTTAGAGCACGAGTTGCTGAAAACAGCACAGTTAATGGCGCCATATCTGATGAGCCTCAGTATTGCGGGAAACGAGATATCGACACTGAGGCATCTCTCCGATTTCTTCACAGATAATGTAAAGTGGAGGACACTAAAAAAATTAGATCTGAGTGACAACAAGATTGATTCACTTTCTGAACTACGCTTCTTCAAGTCTTTATGTATCACGGAATTGAACTTGCACATGAATCCTCTGTGTGGGAAATATAAAGAAGATGCCTACGTAAGGGTTGTGAAAGTGAACTTCCCCCATATCCTTAAATTGGATGGAACTTACATCCAGTGCCTGCCGAACTTGCCTCAGTGGCGGCCAAATTACATCTCGAGTAGCGAACGTGGCGACTCGGCTGAGCTCGCCGACCAGTTTGTCGAGCACTTTTTCATGCTGTACGACCGTGATGACAGGGTGTGCCTTTCGGATCTGTACCAAGAGAATGCCTACTTCTCAATCTCTAGCACATACTTTCATGGACAGACCACATCAAACAATGCAAGGCTGAGCGCCTATATAGCACAGTGCCGTAACCTCTTACACCCGTCTTACAAATTGAGGTCGAAGACGGCGCTGTCCCGAGGCACGAAACAGATCCTCGACAGATTTGATGAGTTGCCACGGACTCAGCATGACCCTTACTCTTTCACTGTGGATCTCCTACATCATTCTGAGAAAAGTGCTGTATTGACTGTTACAGGTGTTTTCAGAGAGCGGGATGTAAAGCTACAGACATCACCTCGACATTTTATGCGCACATTTATCCTCATTAGGCTGGAGAATGATGAATATCGGATTGTTAATGACATTGTGTACATTACAAATGCCTCAACAGCACAGGCAGCGGAATCATTTATGTACATACACCCTCAATCAGCTCTAAACAAACCGAAGCAGCTGACGGAGAGTGATAAAAATTCCATGGTAGCAAGGCATTCAGAGCTTACTGGCATGAAGATCGACTGGTCTCGCAAGTGCCTGGATTCTGCAGACTGGAACCTAAGAAAAGCCCTCAAATCATTCATCAGATTGTATGAAGCAGGCCAAATTCCAGAAGCTAGTTACATACCAGGTGGTGGTGTTTACAATGACAGTGTTCTAAATGTAGCTTTGCAAACTGTATATGAGGCATTCATTGAACCAGCCATGGTGCCATTCACCCTGGTGAAAATGGAGCCTATAGACTTCAGTGGCGAGGACTCTGAAGCAGTGGGTGGAGGAAACGAAGCTGACGAAGACATGGCCGTGCCGGATCCCACATCCATGCTGTCAGTGGGGCTCGAGGAGGAGCAGCCTTCTGATTTCAAGATCTCCATCGCACCTCCTCCAGCTCCACCTCCTGCTGCAGCATTCATTGAACCAGCCATGGTGCCATTCACCCTGGTGAAAATGGAGCCTATAGACTTCAGTGGCGAGGACTCTGAAGCAGTGGGTGGAGGAAACGAAGCTGACGAAGACATGGCCGTGCCGGATCCCACATCCATGCTGTCAGTGGGGCTCGAGGAGGAGCAGCCTTCTGATTTCAAGATCTCCATCGCACCTCCTCCAGCTCCACCTCCTGCTGCAATGCCAAAAGCTTTACGTTCATCATTGTGGTATCACTACAACAGAAAAGAGGAAGACCGAGGAGAATGCAAATATTGTAAAACTACTATCAGTGTTGCGGGAGGTTCTATGGCGGATGATTGGGAAAAAAGATGTGACCACTGTACGAAAATTGAAGAAGAATACATGGACTTAGAGCCTCACATAGATGACGCGACGGAACAAATTATTATCAGATTAGGCGAGGACTCTGACAGCGAAGAGAGCGGAGAAGAGACGGACAGCTCTAGTGAATGTGAAAGAGATGAACTAAATGTTCCAGACAAGAATCTACATAAAGACAATGAGGAACATCCTTCGAGCCAAATTACAGTTCGAAAAGCACATCCGTGTGATAAGTGTGAGAAGTCATTTAATCGGAAGTCAGAACTGAATGTGCACGCTCGAACGCACTGCGAAGTGAAGCCGTTCGCCTGCCACTTGTGTGAGAAGACGTTTGCGCAGAAGAATAACCTGCTGCGGCACTTGCGAACGCACTCTGGCGAGAAGCCCTTCCAGTGCAACCTGTGCGGCCGCACCTTCGCTCAGAAGGAGCTACTCATGTCCCACATCCGAATCCATACGGGGGAGAGGCCATACTCGTGTCTGGTTTGCGGCCAGGCCTTCAACCAGCGGCACACCCTGACTCGCCACGTCAGGGAGCACGCCAACAGGGACACCGCCAAAGCATTCTCTTGTTCACAGTGTGGCAAATCATTTCCCAGGCAGATTAACCTGGACATCCACATGCGGACTCATACTGGTGAGAAGCCATTCGAATGTGAATTGTGTGGTAAACGATTTTCACAGTCAGGACACCTCCAACGGCACAAGTTGACACACACTGGCAAAACACCCTTCCCGTGTGCAATCTGTGGAAAAGGATTCACGCAAAAGAAGCGCCTCGTTGACCACGCTCGTACGCACACAGGCGAGCGGCCTTTCATGTGCCACTACTGCCCAAAGTGTTTCACTCATGCCGAGTACTTGAAGTCGCACCTCCGAACCCACCGTGAAGAGAAATATGTGTGCCCTGTATGCAGGGAAACGTTTCCGCGCAAGTACGATCTGAGGGAGCACATGCGCATCCATTCAAGTGAGTGGCCTTTACAGTGTGCGCACTGTAAAGCGTGTTTCATTTCGAAGAGTGATATTGCTGATCATATACACACTCAGCACCTTCCAGACATAATGGGAGACTGTGCCTCTCCGGTCAAAGAAAATCTCGTGAGATCAGTTGGCGATACAGGTACAGCTTTTGACGAGCTCAGCGCAACCACGTACTGCAAGATTGAAAAAGAAGACACCAGTGGTGAATTTATAACAGTGTTGACTGGTGGCTCGGCTTTACCGTTGTACAAGGAAGAGCAGGGTGAATCGGAAATTCTTCTAGAAAACAGTGATGCGCTGCCACACAAACACAATCCCACTGAACCATCTGGTACTATCTCTGAGAACATCTTCATCAAAGAAGAACACATCTTGGATGAGCAGGATTTGTTGAGTTCGACAATCAAAAGGGAGTCTACTGTTTTGCCACCACAAATCTTTCCTGACAGTGTTCCCATGATAGAACCGTCAGTCATCATTAAAGAAGAGAGAGATGCGTGTGTGGAAGATCCCCCACATTTGAGAAGTGATACAGTAGTTACCACTTCAGAAGCATCAGTTGCAACCAGTGTCAGCCGTGAAATAAACTTACCAGCCACCACTGAAGAAAACACTGCTGCCCATTTGGAAACAAACCCCTGTTTGGAACAAATTACCTGTAAACAAACCAACAAAGAAAAACAGATATCATGGGTCAAAGCAGAAGTTATGTCAGATAATGGCTGTGTTAGGTTTCAACAGAATGAAGACATTCAAGATTCTCTAGTGACTGGCAAAGTGAAAACAAATGAAAGCTTAGATACCAATTTGTTCACCAGTCCAGAACATTCTTTCTGTCTGGAAACTGAAACTGCAACTAAAGGCTCACCTGAAAGACCCATTTCTGATCTCAGAAGCAAAATAACAGCACCTGTCAACATAAATAATGAGCTGAACTCGAGTGAAGAATATCCACTGCATTTGAGAGATGATGTAGTGTTTCAAACTTTGCGTACACCACTCACCTCAGATATTAGCAGGAAAGCACATTCAGCTGCTAACTTCAATGAGAGTGCAGCCTCAGAAATGCAATGTCCACTCTATCTGGGAAAAGATGCAGTGCAAAAAACATTGCCAACACCTAGAATTTCTAGTAGTGGCACCAGTGCAAAATCAAGTTCTGGTTTCAGGGAACAGGCGACTAATAATGTAGAAGAGGCAGCTAACAAGTGGACCGCTAGGCGTCACGGGATCGCTGAAGCGAGAGAGAGCGTCTCGCGGATGACAGAGACGGAGATAGGAAGGTCAGCGGAGGTTTCCAAGAGGTCACCGCGCTATACGGCAGGGCCTGGGAGACGAGAGCTGCGTAGGTGGGGGGGCCTACGTGACGAGAACAGGCAGAATGTTCTAGAAACATGA
Protein Sequence: MSLPVSLCILRIELSDEFSDKKSDKNSGLCGAMAAENMKRYGRGRREMRNLTIETYSNDGESRPRGLIPGSESRESTPLCLTEEDSKSRRSCDSESESAYKSRSQIPFVSGNPFVEVTKGILHLYKENELTSMERASQRSQTICILAVPATMTCHDLLTFTAACHADIQHLRIVRDGSPNQYMALLTFRTQQAAAEFYTSFNGVPFNSLEPDCCCHLVFVSHVELVCEGGSEGELAPPPSHTELPTCPVCLERMDESVDGILTILCNHSFHGSCLAKWGDTSCPVCRYVQTPELVADNRCLECRSADSLWICLICGHVGCGRYVQGHAFEHYQQTQHCYAMQLGNNHVWDYVGDNFVHRLLQNKGDGKLVEARSPDKEECEEKMDSVQLEFTYLLTSQLDSQRLYFEDKLAHLEQQAYLEASELKEKVSKLSEENARLQTKVATLTREKQAMDKKLSQANARAVAARAELQEERQMGKALRENQTAWQDKFQQLEKQFTTYREEKDKELAEVREQLRDVMFYLEAQKQISESSDRDEIAEGQIVVPESSTATSRGGSTGGRHGRHRRKHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -