Lmig019125.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- Crot_1
- Assembly
- GCA_026315105.1
- Location
- scaffold39023:43489-261044[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-07 0.001 19.4 0.0 3 31 270 302 268 322 0.77 2 2 1.9e-14 2.1e-11 44.0 0.1 3 43 373 417 373 419 0.91
Sequence Information
- Coding Sequence
- ATGAAGGTTTTTGGAGAGGCTTTTGCATTAGAAGCTCGTTTCTCAGAAAAGTTGCCCGTACCTGTAATAGGTGGTCCAGATGATCCAAGAGAAAGTGTGGAAAAGTTTTATGACTTTTGGTACAACTTTGAGTCCTGGAGAGAGTTTTCTTACCTTGATGAAGAAGACAAAGAAAAAGGTCAGGTCCGGGAAGAAAGGAAATGGATTGAGAAACAAAATAAATTTTATCGAGCAAAGAGGAAGAAGGAAGACATGACACGAATTCGAAATCTTGTGGATACTGCATATTCTTTAGATCCCCGAGTAGCAAAATTCAAACAAGAAGATAAGGATCGAAAAGAAGCAGCAAAACAGGCAAAGCGAGAAGCTGCTAGAGCTCGGCAAGCGGAGGAGGAAAGAAAACTTCAAGAAGCGCAGGAAATAGAGCAGAGAAAGAAGGCAGAGATTGAGGCGATTGAAAAGGCCAGATTAAGTGCTCTTAAAGCAGAGCGAGAAGCTCAAAAAAAGACACTTAAAGTTAAACGTGCAACATTACGAAAACTTGTGAAATCAAATGATTATTATGTTGAGAATGAAGCAGAACGCGTGCGACACATGGCGAGCTTGGAAAAATTGTGTGAAGTCCTTAAGCCTGAACAGTTTGATGAACTCTTAGAGAAAATGACACTGGGTGGCCGAAGTGTATATATCAGTGCAATTGAAGAAACGGAGAAGCATATTGAAGAAGAGCGCCAAGCCCTTTTAGCTGCATCCCAACGTAATAGTGGTGCATCTGGTGCGCAGGGATCGAAGAAAGGAACACAAGTCAATTGGACAACTGAAGAACTCCACCTCCTTATTAAAGCAGTTAATTTATTCCCAGCTGGAACAAACCAGAGGTGGGAAGTTGTGGCAAACTTTATTAACCAACATGATACAACTTCTACAAATAAGAAAACTGCAAAGGATGTTCTTGCAAAAGCCAAGTCCCTCCAAAGTTCAGATTTCAGCAGAAATGTTTTAAAAGAAACTGTGAACAAACAAGTGTACCACATGTTTGAGAAGGAGCATTCTACTGGTGATAAAAGTGCTTCAGCCACAGAGAGACTTGATGTTCCAGTGCCAACAGAAGACATTCCATGGACAGCAGCTGAACAGAAGCTTTTAGAACAAGCACTGAAGACATATCCTAATTCAACACCAAATAGGTGGGACAGAATTGCAGAGTGCATACCAACAAGATCAAAGAAACAGTGTATTTTGAGATACAAGGAAATTGCTGAAATGGTGAAAGCCAAAAAAGCAGCTCAAGCTGCTGCTGAACAAAAGAAAAAATAA
- Protein Sequence
- MGIRSSKGGSGDGGGVPEGAVGPLSAGATPPLTAGVRALYVVPEGSGETTFRQDELLPPLPLPPLEHTMERFVDSCRPFCSEAELEDVRRVAAEFAAGEGAELDRVLRQRAATSHNWVERWWEEGAYLSNRQPLLPFCSMTGAMPLADLGWRLGEGRQTEHASLYAYHMTRLWQLLREERLLPTRSADGCTTFSMRQFRRLFNCARIPQPGTDRLDVHFRTRREGACPSHVVVICRCGRLYRCESVHANGVTPLTPLEWQWQLKEVVARCEGEGAVRPGVGVLTCSDRDRWARNYARLRESSARNAATLSEIESAMFVLALDDARPGSSQGACGAESLGGNFSYRWADKSLVLVFFADGVVGGVSDHTAYDGMISIAAMYFVYTAMKDTKGVWPLENDFVSFRRHLRTPQELTFDLDEGLRNEIVRVNEELEPNHWAVCVTYERYRGFGKEFLQAHRLHPDSCVQMALQLAYYRLHNKAAPVYETATTRAYYNGRTETVRSCTVEQMEWVRSMLDAASSDAERERLLRRAVARHDRLMAEARANAGCDRHLFGLYCAAVEAGRPVPALYAHPAYSRSGGNGNFVLSTSLVGYTPVSGGVAPMCLDGYGCFYSITASSIQLTVLVFRASRETSGGRLCAALAHSLDDVARLLGPPPPAADAALPPAKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -