Lmig012218.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- Skp2
- Assembly
- GCA_026315105.1
- Location
- scaffold216399:20814-84768[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 1.8e+03 -0.6 0.0 26 41 47 65 39 68 0.77 2 3 3.6e-10 3.8e-07 30.3 0.0 3 46 126 169 124 169 0.97 3 3 2.5e-09 2.6e-06 27.7 0.0 16 46 348 378 347 378 0.97
Sequence Information
- Coding Sequence
- ATGGTATTGGCAGAAAGAAACTCAGAAAGTGCTAGAAATGGTCGGAGATCTAGAGGACCGAGTCCAAATGGTCATGCGTCGGATTCCAGTAGCGAAGAAGAAGGAGAGAAAATTCGCGTGGGACGAGATTATCAAGCTGTTGTGCCAGAATGCATCCCACTGTCAGAACGTCGTCCGGAACAGTGTTCCGACAGAGCGTTATTGGTCTGGTCCCCGACCAACTCCATCCCCGACTACAAGTTGGACGAGTATATTTCGCTCGCTAAGGAAAAGTACGGCTACAATGGAGAGCAAGCCCTGGGTATGCTTTTTTGGCATAAGCATGATCTTGAACGAGCCATTCTTGACCTGGCGAATTTCACGCCATTTCCAGATGAGTGGACAGTGGAGGACAAAGTGCTCTTCGAGCAGGCCTTCCAGTTTCATGGAAAGAGTTTCCACCGCATCAGGCAAATGTTGCCCGACAAGACAATTGCGAGCCTCGTCCGCTACTATTATTCCTGGAAGAAGACTCGCAGTCGCACCAGCCTCATGGACCGGCAGGCTCGCAAGCTCGCAGCACACAGAGAGGAGGGCAGTGAAGGTGGTTCGGAGTTGGGCTCCAATACCGACTCCGACTCTGACGATAAGAAATGGACAATCCATCGGGGTATCCGTCGAAAGAGTGGATCACCCCCACGCGCTCAGAATGCAGAGGACGGGTCTCAGAAGGACGGTGCTGAAGGAGGCAAGAATTCGTGTGCAAACTGTGGTGTGTCTTGCACTCACACTCACGTCACGCCGAAGGGCAACATGTGCAGCACGTGCTACCAGCACTGGAGGCGTACCGGCAGTGTGCGACCGACAACCGGCCCCGTGAAGAGAGACCGCCACATGCATTCCTTACTGCGACACAAGCGAAAGCCACCGCGCGGCATGTACATCAACCACGACGACCTGGTGGCCATGGCCTCATCACAGGGAGGTGGTGCCGGCGCCGGGGGCGAGCACATGCTGAAGGCTATGGACCGCGAAATTGTCTCCCTCAAGAGGCAGGTCAGGGTGCGCAAATATGGCAAGGACTTTCGTGCAATCGCAGAAGTTCTGGGCACAAAAACAGAGGCCCACGTACGTAGTTACTTTGTTAATTACCGCCGGCGTTACAATCTTGATGCTGTGCTGAAGGAATTTGAAGCAGAAAATGGACCCATTGTTGATGCTGAAGCGGACAAAGATGAGAAGATGGAGACAGACGGGGTGTCTTCTGGGAGTGAGGCGAGCACTCCAACACCCGGGGGCAGTTCACCAGTCACAGTGACATCTTCGGCAACCGGAGGGTCGGCGGGCGCGGCAGCGGCGGTCGGCAGCACCGGCGGCGCCTCCGGCACCGGTGCTTCTCCCGGGAAGAATGCCGCCGGCTTTCCGAAGACTCCACCTGTCGGGCCGGGACAAGCTGCAAAATGA
- Protein Sequence
- MDSLPDEILLHIFSYLNMKDLVFSAQYVCRRWLRVSRDDALWQDKRYNPSDESEPEILLRLQKMPSLRAFILHRRPTDVILETLSSCCKNLVELDISCLEISSYPTINFSTLYKLVLDCPNIEMLSIPDTLVTFDEFSNVIARWKKLTELEIVGAAKKPLSLRPIGDGCPSLKHIGLYSGYYKNEDLEYVLRKKRNTIVSVVLPWSVEEGKSTIPVLKVCCEKIEALKICDYREVMVQESLDTLESLIHLKKLWMHGLENLSVQRLMPVFECGSLSNLVMLDLSYYESLDDRLAQTICIKCPLLQQLSFHCSSLLTGEGLRFINCLKKLVFLDLYWCSGITDNGIVFLVQCQTLRDLNIAGCVQLTECSMQMLLTLGQLRSLILSGCTVKGLPFRSFPTHLPYLRKLDLKYCEEVDIEALNELELQMPNLSVERMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -