Basic Information

Gene Symbol
Cont
Assembly
GCA_026315105.1
Location
scaffold247145:188752-191196[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.15 1.6e+02 2.8 0.1 2 18 149 165 148 170 0.85
2 6 0.3 3.2e+02 1.8 0.1 31 46 239 254 227 254 0.84
3 6 1.3e-10 1.4e-07 31.8 0.4 1 46 260 307 260 307 0.97
4 6 0.0088 9.4 6.7 0.1 1 44 313 360 313 361 0.94
5 6 9.6e-14 1e-10 41.8 0.0 1 43 367 409 367 412 0.97
6 6 1.3e-12 1.4e-09 38.2 0.1 2 46 419 463 418 463 0.96

Sequence Information

Coding Sequence
ATGGATGGAGAAGTGTGTGTCGAAGAGGCCAAAGCAGATATCACTGACTTAAAGAATGTTCTCGCTTCTACGGAAAGTGAAAATAATAGTTTAAAGAGGGAGCCGACGGTTTTTGGAGGTCGTGGAAGTTTGCTACACAGTAAGTCCTCTTCTGTCCTCAAAAAGTTAATTGAAAAAAATCAACAACGTTTGTTGTGTCTTACGGAGTTGGAAGATGCCCTTACCAAGCAACTTTTAAAAGTTTGTGACGAATTGTTAGCAGTAAATGATGATATATCAAAAGTTAAATTGAATAATGAGCAGAGAAAGCCTCGTGTGAAACCTCACCTAACTAAATTTGGGACACCTTACTTTCGGTATAAGGAATCTAAACCTGACGATAATTCTGATGTACTGTTGTTGAGGAGGATTGGTGATATAGGATATGTCGAGCGGCCAGTCCCCCAAAGTTGGCTAGAAACGGAAAAGAAATGTCTAATCAAGGCCATTGAAACGGAAGAACGAAACCGACAAATGAAAGAAATCGAAATAGAAAAGCTGAAAGTTACAAAGAAAATGCAGACGTGCACCGGATCTGAGCGGATAGAGTTGCAGTTGGAACTTAGCGATTTAAATAAAAAAGCTTGCTTAATCAAAAATATCCGAGGTGCTCAGCTATTTCATGACAATTCTTGTAATTACGATTGGATTAAAGTTTCCGTTGTTGATCTGAAAGGCAAGCATAGCGACCATGAATGTAAAGCAATGTGGACTAATTACCTTCATCCATCGATCAACAAAGGTCGTTGGAAGGCAAACGAAGACGAAAGGTTGAAATTTCTTGTGAAGAGATACGAATTCAGCAACTGGGATACAATCGCTGTTGAACTTAATACACAGCGATCAGCCTTTCAGTGTATGTGCCATTATCAGAATAGACTTAATCCACTGTTAATGAGGAATGTATGGGACGAACACGATGATTATACACTCACAGTACTCGTAAAGTCTTTCAGGAGAGGAGATTATATACCGTGGAAAAAAGTTGCTTACTGTTTTAGCAATTGCTCAATTGCAAATGTTGCAGCGCGATGGAAAACAATAAATCCAGAATTGGTGAAAGGAAAATTTTCAGAAGCAGAGGACGTGATCCTGCTTGCAGCTGTTAGGAAGTTTGGTACAGATTTTAGGAAGATATCGGACCATTTTCCAGGACGAACAAGTGCTCAATTGCAGGAGCGCTATAAAGCATTTTTAAAAAATGACCCCAGTGTGAAGCCTTGGTCGCCAGATGAAGATAGACTGATCTGGGAGAAAGTTAAAGAATTTGGACACAACTTTTCTCATATTGCAACGTTCTTGATCAACCGCAACCGAGTACAAATTAGGCATCGTTACTACAGGATGCTGGACTGGTTGAAGAAACATCCAGGTGAAGAGTATCCTGCATGCAGGAGTGGTCAATTCAAAATAGCTGAAGGACCAGACGAACTTTGGAAAAAGGTTGTGGATGTTATGAAGGACAAAAAAGTAAAATTTAAGGAAGTCAATGGCGATGCTCTTATGGATGATGAAAGTTTTTTAAGTCTCCAAACAAAGTTGAGATTGAAGAAAAAGAGTGGACCAAAGCCTGGCTACCAGAGGACTTTTCATAGTGTTGATTTAGAGCTTGCTAATTTTTTTTGTTCTATTTATCCACAGAGTGGTGGAAGGCATAAAGTCAAATACAGTGATACAGAAATTGATACATATACCAAGTCCACAACCAAGTTCTTAGAATTTTTATGTGCAGATTTGAAACGTGTGCCCGAGGATGACATTAACAATGACCAAATGCTTTCTGTTTTGGACAAGTTGGTGCTGAAAAGAATAAATACCAACCTGGATGAGAAGGCATCAGTTATGGCGAGTTTACCTGGTACTAGTGTAAGTTCAGAAACAACTAGGGGTCCTGCAGGGAATTACATTTTTGGAGCATGTAAGGTATGTAACATTAAACATAGTGAAAGATTTTACATCAATGTATTGCATAATGCAGTACCACCAAACCAGACATCTCTCGTAGGAATTCGTTCTATTATGTTGTGGCGCAATGTTTTGAAAGCTATGCGATTCTCATCCGAAATTAACATAGAACACACATTTGAGGAATGTGGTCAGCATGAGGGAAATCAAGTGAGTCAGGGAAGTGGGAGTTGTGATGCTGATGAAGAATGTAGTGAATGTGTTAAGGAGGCTAAAGCTGCATTTACAAAACATTCAAATATTTGGAAATCTCGATTTCAGTCAGTTTTTGCATGGGCAGCTTTATGTAGTGAATTTGCTCCTAGTGATACATGCTGTCAGGATGATGAATTTAATGATGTAAATCTGAGCAACAAAGCTGAATTATTGGAACATTTCAAGACTAAAGAGCCTAAAGTATATGTGGGAAAAACACAGAGGAAAAGGATAAAATTAAAATAA
Protein Sequence
MGIMTVKLLYATLCLLFLATAQRIREQESCPRHWLSFQDSCYRFIKSPLRSRNDARRNCQAYDADLVSVSNLDEHGFLVHQLVMQDPQHRRWYTSARQQSPDYWVNDGDNSQVINMDGAFLPEQESTFNKDYLVYSFSNQLKRWGFEKVDGEEPLLFICEAPRSSLSYLVVEDRTFTYGVEVEDPEKVPRGPFFKRQPQDVVFDLSKRSTLNDVTLSCLAGGYPTPTYEWFREDYENDRLVARKIDPISDRRYTISGGALIIYDPKMIEDRASYHCKATNMFGTIMSESVQLSFGFIGEFNLKRSPETGNQNWGKTVFCDPPQFFPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALENIDRGNYSCSVQSKVSDKGRTGPFFPLRVNPNSNYQQLKFPNNFPKAFPEAPVAGQDVRLECVAFGYPVPSYNWTRRGAHLPRGAVLSNYNRVLTIPRVQVEDQGEYVCHVHNDRASIDNGVILTIQAEPNFTIPLVDRHMDKNSDLTWTCEAFGIPDVTYSWLRNGEPLDVEKLPGEDRDRYRIVDNVLTIKNLDPERDQAMYQCKAKNQLKAKYSSAQLRILSLKPSFKKRPLEPETYAAEGGNITINCNPEAAPRPSFVWKKDGAQIGSGGLREILRNGDLLIRSVSRNDEGLYTCIAENEYGVAESTGRLIVLRGPRFIQTMVPVEHTAVERDMELRCQAVSEEILDVAYIWTHNGLRIRDTDPSASRLHIKGNVLDIRNISFADGGDYECIIKSAVGRIATKTHLIVEGPPGPPGGVQVTDIKKTSATIQWTDGATNGRPILHYTISGRTRWNNTWMNLSENVEAKEIYLYNGRKEATVENVLSPWSGYEFRVAAANALGYGPPSAPSPIHNTPADVPYKAPSNVGGGGGKIGDLTITWDPLPPQDHNGPGIYYKIFWRRTRDTEFQSLGLKKYGNIGTAVVRIQQEFYYTQFDVKVQPVNDVGYGPESEVVTIYSAEDMPQVAPQQVSARAFNSTALNVSWVPINQSREMIRGKLIGHRLKYWKEKNREEDSVYYLSRSTRPWAIVVGLEPDTYYYVKVMAYNSAGEGPESERFLERTYRKAPQKPPSAVHIFGVNPTTVKVVWRYVAPSAEEEPVIGFKVRVWEIDQDMSTANDTIVYVGSKLEAYVDNLSPGKIYHMRVLAFSNGGDGRMSSPALTFQMGNFVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-