Lmig012290.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- Olfml2b_1
- Assembly
- GCA_026315105.1
- Location
- scaffold49778:3529886-3772999[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.3 5.4e+03 -2.5 0.0 4 19 81 96 80 97 0.72 2 5 0.00082 0.83 9.7 0.2 2 36 194 228 193 238 0.80 3 5 2.8e-10 2.8e-07 30.4 0.1 3 37 245 278 243 285 0.86 4 5 0.72 7.4e+02 0.2 0.0 28 39 324 335 323 341 0.77 5 5 6.7e-12 6.9e-09 35.5 0.3 5 40 362 397 361 400 0.94
Sequence Information
- Coding Sequence
- ATGTGTGCGAAACCAGAACATTATTGCCTAAAGTGGAACAATTATCAAGATCATTTGGCAGAAGTGTTCCTACATTTACTGCAAGCCCAATCACTAGTTGATGTGACATTGTGTGCTGAGGGGCAGAAGATATATGCACACAGGATTGTTCTTTCAGCATGCAGCCCATATTTCCATGAGCTTCTTGCAGGTGTGGAGGAGGCCCATCCAATTATAATCCTCAGTGAAATGTGTGTTGAAGACATCCAGGCAGTCATAGAATTTGTTTACAGGGGAGAATTAAGCGTGACTGCAGATCGTTTCAGTTCTGTTTTGAAAGTAGCTGAAGAATTAAGAATAAGAGGGCTTATGGAAGTGAGCAACCATTTGCCCCAGTTGGATGATAACTGCCCTGAAAATGAACAAGAAGTTATTGTCTGTGATGCATCAGAAGCATGCGCACCAGATCCAAGTGAGGCAGCAGTTCAGTCAATACCTGCAGAAGAAAGTCCACCGCAAAATACTTCAACGGAGAAAAAACAAGAGGAGGATTGTAGGAAAAGAAAACGGAGAAAGGAGAGCAGCAAAAAGGACTACAGTGATGAGAGCATGGAAGCAGCACTAGCAGAAATTCGAGATGGTCGCCCTCTTGTAGAGACTGCTGCAGCACACCGCATACCACGCTCAACTCTGTATGTACGAGCATGTGCCAAAGGAATAGTTCCTACCATGACAAGGCGTGAACATTCTGGAGAAAATGTACAGGCTGCTGTTCGTGCTGTTACAGGTGGAGCAAGCCTTCAGCAGGCAGCCGAGCAGTACAAAATACCGAAGACAGTATTGTGGCGGCGTGTCCACAAGGAAGGTGCGGGTGTGGTACTGAGCAGGAGGTCCAAGCTGCACCAGGGCCTGAGTCGGGAGAGGCGTCAGGCAGCCATACAGGCCCTGGAGCGTGGGGAGAACCTCAGTGCCGTGTCCTCTGACTTGCAGATACCCAAGAAAACTCTATATCGTGAGAAGGCCCGCCTGGTTGAAGCAGGACGTTTACCGTCAAATTGCATACGCAAGCGTTCTGGAACATCTGATGCATGTAAGCAGTTGAGGTTAAATGAAGCTGTAGCAGCATGTCAGCAGGGGAAAATGTCTCAGGCAGCAGCATCAGTTGCATACCAGGTGCCAAAAACTGCTATCTGGAGAAGGTTGCAAGAAGCACAGAAATTGCCATCAAAGAACCATGAGCAAACTTCTGAGGCTGGAGTTGACTCAGCAATGGAATCAATACAAGAACAATCAGAATTTTCTTTTCATGATGTTTCCACACAGATACCTGTGACATACATTGATGAATCAGATTTCCATGAAACATCCCTCATTATACTGACTACTGATATGGACAATGGAGTAGAATTACAGGAACAAAATAATCTGCTGATGGAAAGGCAACAGGAAGAGGAGTGCACAAAGAAATCGTTATAG
- Protein Sequence
- CADDGGGGGRWAAVGACLVALALAQLAASCYLLRYVQQVERACCGRGDGHTPPPTPGEEASRPRAARSLADDSNAVVQEATVEFFDPKLRPEIEERDQQQSKAAGDKGATPWVWLTSYSRLPLVAIQGFCKSTREYCPPGAPGSPGPQGPPGLHGQPGAKGERGERGFPGEPGARGLPGVAGMPGPRGPKGELGYPGPPGLDGRDGVPGEPGLDGLPGRNGLDGVPGRPGTDGVPGTPGLPGTNGTDGLPGLPGPIGPPGPKGPRGIAGPRGRPGKPGTNGIPGTPGINTWKVRVNGSLSNELLIPPSITGSGALERTEATAVHEGDNVRISCGAAGSPRPHVQWRKLDGAPIPLGSWQTVSVSGHTLNLTRVSRAHMGVYQCIADNGIPPPANKTYRLEVHFPPLIRIHRQLVGVVNGSTGVLECDVEAFPEPVCYWEREDGRLVEPGHKYITSTSDRDRYKMRMQLNVTRVYPPDHGKYHCVAKNEMGITRGVFNVYGVDPRLSAPPPVLASVPGAAVFGEGPPPPLDLDDLCPAPPACPQCPRAARCLGGDLSLLKLVGGRLDIRGFDNVTVPGLPNRTTDCLLYAIGKPVYHRWTDMTYGSWMRDAMPRPESSADKFWVTNETDPYHLYEFANKTAFSKDVPTKVYKLDHPFKGNAHVVYNGSFFYHERGQQRVLRLELASGHYTPLDVPLVAASGPNYLYSTEHNYIDFSVDDNGLWLIYALPDINNTIVMKVDTSTMQKQYMWNISVNHHEVGEMFVVCGVLYAVNSVTDRITKIAFALDLYTNNLQDVNLNFTNPFRRTTMIGYNHRNKELYTWDKGNQLTYPVRYHEMGLHLNGTAGGGSASVEDRSDADADASSAQLHSGIEVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00913002;
- 90% Identity
- iTF_00913002;
- 80% Identity
- iTF_00913002;