Lmig010234.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- PAF1
- Assembly
- GCA_026315105.1
- Location
- scaffold198148:405308-613519[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-14 9.6e-11 41.8 1.6 3 37 478 512 476 515 0.94
Sequence Information
- Coding Sequence
- ATGATACAAACAGCACAGTTCCACCACCCACACCCCCATCCACGCTCTTTCCAGGGTCGTGTGCCAGTGGTTCGCACAGCTAGTGTCGAACAGCGCTGGCAAGACTTGGCAAACCTGCTGAGCCTACCTGGGGAAGGTGTTCCTGGCCACACGAGCTACCCTCATCACCATCATCCTCATCACCCACACGCACACCATCCACATATTGGATATGGCGGCAGTGCAGCTGGAGGTGCTGTTGGCGGTTATGGAGATGCAGCAAGGGGGGTCTTGCTGCACAATGCCACGCTTGCTCCTCCCGTTGGGGACATGAATGCTTCCAGTCCATATCATGGACATTCTGTTGGAAGCAATTCAAACCTTGGAACTGCCGTGGCTGCTTCAATGAACCTGACAAACAGCAGTGAACCAATGGGAGATGCAGGCTCTACTGCATCATACAAAATGGAATCATCGCATGACATGATGTACTATCAGAATTCCACCACCGAAATAAGTCAGACAACAGAGGGATTTTTGTCATCCATACTAAATGATGAGGATTTGCAGCTGATGGATATGGCAATGAATGACAGTATGTACACGATGCGCATGCTGGACGCGACGGGCAACCCGACTTCTGCGTCTAGCGGCGGGCACGCGGGGGCGGCGNNNNNNNNNNNNNNNNNNNNNGCGGCGGCCGAGGAGCGCATGGACGCGTCCAGCGACAGCGCCGTCAGCTCCATGGGCTCCGAGCGCGTGCCCTCGCTGTCCGACGGCGAGTGGATGGAGACCGGCTCCGACTCCGGACACACGCCCGGCGACCACTACGGCGCCGCCGACTACCACGCCAGCAAGTACAGGCCATACGACTACAGCTACTCTGGACGCCAGCACTCCAGTTCTGTTAGCACTGCTGAGACGCAGCACCGTGTCCCGCCCATGGCTCAAAAGAAACATCAGATGTTTGGAAAGCGATGCTTCCAGGAGCAAACTGCAGGAGCAGCTTCTTCGTTGGGTAGCCACGGTACGACACCTAGTCTGCCACCAGCGCCTGTAAAGTACGAGTTCAGTGAGGCGGTGCCTGCTGGTGGAAATGCATTTGGCAGCCCGCTGGAGGCTGGAGTTGCTGCTGCAAAGGCACCTGAGATGAAATATAGTTGCAGCGTTGAATTTGCAAGGCACCATCCAGAAGTAAGACCATCTATTGACCACATACAGCACAATCATTCATACCACCTTCCTGCGGAAAGTACAGGTGCCTTACAAAGACCTGTCTCGAGAGACAAGCAAAAAGGTCGTAAATCTGATGAGGAACATCTGAACAGAGATGAAAAACGGGCACGTGCAATGAACATCCCATTGCCTGTGAATGACATTATCAATTTGCCAATGGATGAATTTAATGAGCGACTGTCAAAATATGATCTTAGTGAGGCACAGTTATCACTTATTAGGGACATCAGGAGGAGAGGAAAGAATAAGGTTGCAGCACAGAACTGTCGCAAAAGGAAACTAGATCAGATTCTCAGTCTTGCAGATGAGGTTAAAGAAATGCNNNNNNNNNNNNNNNNNNNNNATGCAGGAGAGGGATTACATGCTGGCTGA
- Protein Sequence
- MAPTIQSNINTERDQRPVRPGEKRSELVCRVKYCNTLPDIPFDPKFITYPFESIRFIQYNPTSLERNYKYEVLTEHDLGVHIDLINKDTYAGDPGAVLDPADEKLLEEDVLTPQDSKRSRHHARSVSWLRRTEYISTEQTRFQPQTMDKVEAKVGYSIKKNFKDETLIMDRDSQIKAIEKTFEDSKKPIEKHYSKPNVVPVEIQPVYPDFKIWKYPCAQVIFDSDPAPTGRSFPAQIEEMSQAMIRGVMDESGEQFVAYFLPTQETLEKRRKDFTNCVEYEDEEEYDYKMAREYNWNVKSKASKGYEENYFLVVREDGIYYNELETRVRLSKRRQKVGQQPNNTRLIVRHRPLKAQEYRMQRYRERQLEPPGEEEEDEEDEEEEEETQEQQQQDDGEDTQQDDKTEQREDDGEGSDGEKATEDGDTQNGEAAEDDDDQENSGNDSAIASESEKEGSDKDESDKETSDKEGSDKEDSDKEGSDKEDSDKEASDKETSDKEASDKETSDREASDKEVSDREASDREASDREASDREASDKEASDKEESQDENEEDGERQETEAEGDEEEAGTEKEADDDQEAAASAKEDGRSDSEEEGSGSEGSSSSGSNKSRSGSGSGSGSGSESSSASDSDSGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -