Lcra017985.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- pnr
- Assembly
- GCA_947563755.1
- Location
- OX387425.1:14592362-14595804[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 6.5e+03 -1.6 0.0 15 24 334 343 333 343 0.88 2 2 1.9e-17 1.1e-12 48.9 3.6 1 34 360 392 360 394 0.98
Sequence Information
- Coding Sequence
- ATGACAGAAAAAAAGCAGCAATCAGAAAAGCTTTTAGAAAATCTGACAACCTCAATACACACATTACCTCCCGATTTTAAAATCGAACGACCACAACTAGCTTCAAATGAAAACTTCATGACGCCCACCAGAGTACCAACAGAACTAGTGGATGTGAAGACGATCGGAATAAAAACAGAACCCGTATATATGGATGAAGGAGAAATATCACAAGCGTCACTTGAACCTAAGAAGTTTGATGGCGAAAGTGTAATTATTGTTCCCAAAGTTGAAGCATCCGATAATCTTCTGCCCCCACAAGATGTTTCCATGGATTTGTCCAAGGATAATACCGAAGAATCTGTGCGCGAACCTTTAATAAAGGTGAAACCCCCCAGTGCCCTACATTACACACCCGAAAATAGTATTGCCGATTTATCTAATATTCCTAGAATGATTACTCAAGATTTCAGTCGTTTTGTAAGCGACGACAAAAACGATAACACCTGTCCTACCGAACCCACTGATCTATCGAACAAGAAAACTGAAAAATTAACATGTGTGCCTGAGATTGGTTACATCAAAGAAGAAATTGATGCTGTTTCGGTGTCGAGCAACAGCTCTGATCCAGAACGATTAGAAGTGGACATGTCTCAGGTAACTGAAGAGCAAAGTGATTCAACAAACAGCGAAACGTCCCCCATATCCGAATCAACGTTAAATCAAAATGAAGTTGACCCTGCACTCTGGCAGACTCTTTCTCGGAATGGTTATAATCCATCTTTGAGTGGAGAAGCTAGCCAGCTACTAAGAAAGCTTATAACGTGTCGAAAATTGGGCATGACTATAACTCCCGCTCAGCCGCGTGTTTTAAATTACACATTATTTGACGAGAGACAAGCATCTGCCGATAGTATTAATCAAAAAAATTCGTGTAGAAGAAAACAAAGCTATCCTTCAAAGGCAACCGTTCCACCTGAAGGTGCTCCAATGGAACAAGATAATGAAGATTACGAGTATGGGCCAGATAATTCTCTTATCTTATGCAATTTGGGAAAGGGAAAGAAAATGGAATTGAAACGAATGGTAGCTATATCTTGTACAAACTGTGGTACTCAAACAACGACGATTTGGAGACGTAATCTAAGAGGGGAGATGGTATGTAACGCGTGTGGTCTTTATTTCAAATTACACGGAATAGACAGGCCTGTCACAATGCGAAGAGATACAATTCACACTAGACGTAGAAGGCCAAAAGCGGCCGAAGCAGAAAAACCGCATTCTAAAGGTAATTTTATAAATAACTTAGTAAATACACTGAGAAAATGA
- Protein Sequence
- MTEKKQQSEKLLENLTTSIHTLPPDFKIERPQLASNENFMTPTRVPTELVDVKTIGIKTEPVYMDEGEISQASLEPKKFDGESVIIVPKVEASDNLLPPQDVSMDLSKDNTEESVREPLIKVKPPSALHYTPENSIADLSNIPRMITQDFSRFVSDDKNDNTCPTEPTDLSNKKTEKLTCVPEIGYIKEEIDAVSVSSNSSDPERLEVDMSQVTEEQSDSTNSETSPISESTLNQNEVDPALWQTLSRNGYNPSLSGEASQLLRKLITCRKLGMTITPAQPRVLNYTLFDERQASADSINQKNSCRRKQSYPSKATVPPEGAPMEQDNEDYEYGPDNSLILCNLGKGKKMELKRMVAISCTNCGTQTTTIWRRNLRGEMVCNACGLYFKLHGIDRPVTMRRDTIHTRRRRPKAAEAEKPHSKGNFINNLVNTLRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -