Lcra009813.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- -
- Assembly
- GCA_947563755.1
- Location
- OX387422.1:105836290-105838167[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0011 30 6.0 0.3 29 101 88 161 81 186 0.50 2 3 9.1e-06 0.25 12.8 0.2 35 104 219 288 206 310 0.67 3 3 3.6e-06 0.099 14.1 0.2 32 108 344 418 340 437 0.69
Sequence Information
- Coding Sequence
- ATGTACCCCAAAAAAGGACCTTTACATCCTCGTCTGTTCAACGAAGTTCTTGCAGCTATATATACTCTTAAAGATGCCAAAGGTTCGACCGAAAATAATATTATAGATCAGGTGGAGCGCATTCTAAATAAAAGAATCCCAAATAATTCAAGTCAGGTTAGTATTGTAGCATCACGATCGATATATTTATACATAATAGGTTTGTTCATTAATCAAGCCTTAAAACATGGTATATCGAACGGATTAATAAAATCTAAAAATGGAAAATACGTTTTGGGTATGAATCAAAAAGATTATAGTATTTTCAAAACAATGCTGAGATTGAGTTCGGGAGGTAAATTGGGGAAACAAGTTCGAAGAAAAAAAAGTAAGAAAAATAGAAAGCGAAGACCTAAAAGGCGAATACCTAAAAGACGAAGACGGCATTCTGACCTGAGTGAAACGGATGAAGGCGATGAAGAAGACGATTACGACGATGATACCTGTGCCTCTCCAGGTAATTATGCCGAAAAGGAAATTGTTTTCATCACTTCCACACATAGTTCGACATGTTTACAAGACAGTATGTCTCAAAATTTTCGTAATAGGTATAGATCTCGTACTTTTTTGCTTCAAAAGAACTTAATTATTCACATACCAAATAGACTAGGTAGTATGGGCGTCGCAGTTATAGAATTTAGATGCTTTACTGTGAGTGAATTGGGGGAGAAAGTTCGAAGAAAAAGAAGTAAAAAAAATAAAAAGCGAAGACCCAAAAGGCGAACACCTAAAAGACGAAGAAGGCATTCTGATCTGAGTGAAACAGACGGAGGCGATGAAGAAGAAGACGAAGAAGAAGAAGGCGACGACTACGACTATGACGATGATACCTGTGCGTCTCCAGGTAATTATGCCGAAAAGGAAATTGTTTTCATCACTTCCACACATAGTTCGACATGTTTACAAGACAGTATGTCTCAAAATTTTCGTAATAGGTATAGATCTGGTACTTTTTTGCTTCAAAACAACTTAATTATTCACATAGCAAATACACTAGGTAGTATGGGCGTCGCAGTTATAGAATTTAGATGCTTTACTGTGAGTGAATTGGGGGAGAAAGTTCGAAGAAAAAGAAGTAAAAAAAATAAAAAGCGAAGACCTAAAAGGCGAACACCTAAAAGACGAAGAAGGCATTCTGATCTGAGTGAAACAGACGGAGGCGATGAAGAAGAAGGCGACGAAGAAGAAGACGACGACTACGACTATGACGATGATACCTGTGCGTCTCCAGGTAATTATGCCGAAAAGGAAATTGTTTTCTTCACTTCCACACATATTTCGACAGGTTTACAAGAGTGTATGTCTCAAAAAAGGTATAGATCTCGTACTTTTTTGCTTCAAAAGAACTTAATTATTCACATACCAAATAGACTAGGTAGTATGGACGTCGCAATTATAGAATTTAGATGCTTTACAGTGAGTTGA
- Protein Sequence
- MYPKKGPLHPRLFNEVLAAIYTLKDAKGSTENNIIDQVERILNKRIPNNSSQVSIVASRSIYLYIIGLFINQALKHGISNGLIKSKNGKYVLGMNQKDYSIFKTMLRLSSGGKLGKQVRRKKSKKNRKRRPKRRIPKRRRRHSDLSETDEGDEEDDYDDDTCASPGNYAEKEIVFITSTHSSTCLQDSMSQNFRNRYRSRTFLLQKNLIIHIPNRLGSMGVAVIEFRCFTVSELGEKVRRKRSKKNKKRRPKRRTPKRRRRHSDLSETDGGDEEEDEEEEGDDYDYDDDTCASPGNYAEKEIVFITSTHSSTCLQDSMSQNFRNRYRSGTFLLQNNLIIHIANTLGSMGVAVIEFRCFTVSELGEKVRRKRSKKNKKRRPKRRTPKRRRRHSDLSETDGGDEEEGDEEEDDDYDYDDDTCASPGNYAEKEIVFFTSTHISTGLQECMSQKRYRSRTFLLQKNLIIHIPNRLGSMDVAIIEFRCFTVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -