Lcra039315.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- Cdc5l
- Assembly
- GCA_947563755.1
- Location
- OX387435.1:27444080-27447840[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-10 1.3e-06 29.9 1.7 18 46 2 31 1 31 0.95 2 2 3.7e-12 1.3e-08 36.3 0.1 1 45 37 80 37 81 0.93
Sequence Information
- Coding Sequence
- atgaagtatggaaaaaaccagtggtcaagaatagcctccctacttcatagaaaatctgcaaagcagtgtaaagctcgttggtttgaatggttagatcctagtattaagaaaactgaatggtcaagagaagaagatgaaaaactgttacatttggcaaaacttatgcctactcaatggagaacaattgctcccatcattggtagaacagcagctcaatgtttggaaagatatgaatatttacttgatcaagcccaaaagaaagaagaaggtgaggatgcagtggacgaccccagaaagttgaaacctggtgaaattgatcctaatccagaaacaaaaccagctagacctgacccaaaagacatggatgaagatgaattagaaatgttgtcagaagctagagcaagattagctaatacacaaggcaaaaaagctaaacgcaaggctcgtgagaagcaattggaagaagcgcgtcgtttggcggccttgcaaaaacgcagagaattgagagctgcaggtatagaagtagcatctcgaagaaagaaaaaacgcggtgtggattataatgcagaaataccatttgaaaaaagaccagcaattggattttataatacagctactgaaattttggaccctatggctcctgatttttcaaaaatgaggcagcagcatttagatggtgaattaagaagtgaagaagaggagAGAgaacgtaaaaaagacaagcaaaagttgaagcaacgcaaagaaaatgacattccacaagcaatgctacaaaatcaagaaccagcaaaaaaaagatcaaaattagtcttaccagaaccccaaatttcagatcaagaaatgcatcaagtagtgaaactaggaaaagctagtgaagctgccagagaaatagcaaccgatagtggtgtagaaactacagatactcttttaaatgattacactttcactccacagggcactgctacacctagaacaccagcACCTCAAACTGATAGAATTCTACAAGAAGCACAGAATATGATGGCTCTTACTCACGTAGATACACCTCTTAAGGGTGGTCTGAATACTCCATTACACAATTCCGACTTCAGTGGAGTCATGCCTCAAGTACAAACTATTAGTACCCCAAATACAGTGCTTGCCACACCATTTAGATCAACTAGAAGTGATGGAGGTGGTACTCCAACTAGTACTGTAGGTTTTATGACTCCAAGAAGTGGTGCTGTTGTACCTGTTGGAAAAACTCCCAGTGCAACAACACCATCTGTTAGGGATAAACTTAATATCAATCCAGAAGAAGGTATTGATATAGGAAGTACTCCTGCTGAGCATAGAATACATCAAATGTCAATAAAAGACCAATTGAAGATAGGATTGAGCAGTTTGCCACAGCCTAAAAATGATTACGAAATAGTTGTGCCAGAAAATGAAGAACAAGAAGAACCTGAACAAGCTCAAGCACAAATGgttgaagatcaagcagatatagatgccagaaaacaggaagaattaaaagctaaagaggctagagaactagctttacgttcgcaagtaattcaacgggaattgcccagacctcaagatgtcaacataacagttttgcgtcctccacatgaaagttactcattaactgatctacaaaaagcagaagaactaatcaaatgcgaaatggtgactatgttacaatacgataatttaaaaaatccagttcccacacacagcaaaagatccaacatgtcacaggctcaacagctagcatttttagaacaacatccatatgatgccttcaagaaagaggatttggaaatggccaagtttattttaaagaaggaaatggatgttgttaaaaatggaatgaatcatggagaATTGTCCCTTGAAGTATACACTCAGgtttgggaagaatgtttaagtcaagttctcttccttcctaaccaaacgcgctacacgcgcgctaatttggccagtaaaaaagatagattagaatccgcagaaaaacgcttagagcaaaatagatcccacatggcaaaggaagctaaaagagctgccaaaatggaaaagaaattgaagatattgactggagggtatcaatctcgagctcaggctcttattaaacaattacaggatatgtacgagaatattgatacggccagtttggaattgaatacttttaaatttttacaagatcaagaAAAGAATGCTTTACCCAGAAGAATACAGTCTCTTACCGAAGACGTCAGCAGACAAATGGAAAGAGAAAAAGTCTTACAGAAAAAATACGCGGAATGTCAATTTGAAATCAAGCAATTGCAAGAGAAATATCGACCGGTGCACGCACCTTCCAGCGAAGTTCCCATTAATATTGCAAACGAAGTTTCATCAACTACAAATGGAGAAGTGGCCATGGAAGTTCAAGAAAGTGCTGCGCTTGAAAATTGA
- Protein Sequence
- MKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDAVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEVASRRKKKRGVDYNAEIPFEKRPAIGFYNTATEILDPMAPDFSKMRQQHLDGELRSEEEERERKKDKQKLKQRKENDIPQAMLQNQEPAKKRSKLVLPEPQISDQEMHQVVKLGKASEAAREIATDSGVETTDTLLNDYTFTPQGTATPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSDFSGVMPQVQTISTPNTVLATPFRSTRSDGGGTPTSTVGFMTPRSGAVVPVGKTPSATTPSVRDKLNINPEEGIDIGSTPAEHRIHQMSIKDQLKIGLSSLPQPKNDYEIVVPENEEQEEPEQAQAQMVEDQADIDARKQEELKAKEARELALRSQVIQRELPRPQDVNITVLRPPHESYSLTDLQKAEELIKCEMVTMLQYDNLKNPVPTHSKRSNMSQAQQLAFLEQHPYDAFKKEDLEMAKFILKKEMDVVKNGMNHGELSLEVYTQVWEECLSQVLFLPNQTRYTRANLASKKDRLESAEKRLEQNRSHMAKEAKRAAKMEKKLKILTGGYQSRAQALIKQLQDMYENIDTASLELNTFKFLQDQEKNALPRRIQSLTEDVSRQMEREKVLQKKYAECQFEIKQLQEKYRPVHAPSSEVPINIANEVSSTTNGEVAMEVQESAALEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01344846;
- 90% Identity
- iTF_01105843;
- 80% Identity
- -