Lcra047928.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- ATF2
- Assembly
- GCA_947563755.1
- Location
- OX387434.1:13789436-13790604[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-08 0.00022 22.7 13.8 9 52 235 278 229 285 0.93
Sequence Information
- Coding Sequence
- ATGCTAGTACAAAAGGGTTGTGTAACTCAAGAAAAACCATTTGCTTGTGATGTAAAGGGATGTGAAATGACCTTTACGAATAAGGATCATCTAGACTGGCATCATAAAAAACATGAAATGATGTTAAACTTAGGATTGGTGAATAAGACTATAGCGAATGAAGTAGCAGATCAAACTCCAACACCTACAAGATTCATAAGAAACTGTGAAGAAATAGGTCTTTTCCAAGACCTACAGAATGTAAATCCTTTTGATGAAATATTTAAAAAAGCAGTAGATTCTGTTAAAAATGGTGAAACTTTAGAAGTACATACAAATAATTCAAATGATACTTTACATACCCCACATATCTTGCCACACAATATCGAAAATACATTAAAACAAACAGATGCACATTTAACAAATAATAGTGATTGTGAAGTATGTGTCTTTCCAAGTAGTAACCATGATGATCTGAATTCCACAATTATAGTAATTCATAACGATGAAGTAAATATAAAAAAGAAAATTAAAGAAAGCATACAAAGTAAGCTAAGTAAAGACTTGCAAAAAGATGAAACATCACCTGCTATATCTGTTGTGCCACTTCAAGATTTAACATATGAAAAAGGTGATGAAACTTTGCAAGATTTAACTCATGATAAAAATAGCATCAAAGAAAATAATTCCCAATCTGAAGTCAACACAAAGTTGGAAAAAATTAGAGAAATGAATAGAGCTGCTCAAAATAGATGTAGAAAAAGGAAACAGCAACTTTGGAGGGACATGGAAGAACAACTCACTGATTTAAGACAGGAAAATAAAAATTTAAGGCAAGAATTAGAAGCACTTAGGCTGTTACATAGTAAATGCCAACCAGTTTCTAATCAAGGTGCAGTAGTTACATCAATCATCAAAGCAGAATCTAATCAATCTAACACAAGAAAAATTACATCACCAGCACCAGTTCCCATTCTTATACAATTTCTGCCAAGTTCTCAATTGTCAATGGTATCCCCAGAAACGTCAACACAACCAGTCAAAGATAATACAATAAAAAAAGATAAATGTAGACCACTTAGAAAAATAGTACCAAACATATTAAAGAAAACTAGCTGA
- Protein Sequence
- MLVQKGCVTQEKPFACDVKGCEMTFTNKDHLDWHHKKHEMMLNLGLVNKTIANEVADQTPTPTRFIRNCEEIGLFQDLQNVNPFDEIFKKAVDSVKNGETLEVHTNNSNDTLHTPHILPHNIENTLKQTDAHLTNNSDCEVCVFPSSNHDDLNSTIIVIHNDEVNIKKKIKESIQSKLSKDLQKDETSPAISVVPLQDLTYEKGDETLQDLTHDKNSIKENNSQSEVNTKLEKIREMNRAAQNRCRKRKQQLWRDMEEQLTDLRQENKNLRQELEALRLLHSKCQPVSNQGAVVTSIIKAESNQSNTRKITSPAPVPILIQFLPSSQLSMVSPETSTQPVKDNTIKKDKCRPLRKIVPNILKKTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -